FFCP PHASE1:Hg19::chr1:50575576..50575579,+: Difference between revisions
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|id=chr1:50575576..50575579,+
|short_description=p13@ELAVL4
|description=CAGE_peak_13_at_ELAVL4_5end
|association_with_transcript=88bp_to_ENST00000494555_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1996 | |EntrezGene=1996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3315 | |HGNC=3315 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=88bp_to_ENST00000494555_5end | |||
|cluster_id=chr1:50575576..50575579,+ | |||
|description=CAGE_peak_13_at_ELAVL4_5end | |||
|id=chr1:50575576..50575579,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.11e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.71e-14;3 | |||
|ontology_enrichment_disease=DOID:169!7.42e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p13@ELAVL4 | |||
}} | }} |
Latest revision as of 10:51, 18 September 2015
Short description: | p13@ELAVL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ELAVL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 88bp_to_ENST00000494555_5end |
EntrezGene: | ELAVL4 |
HGNC: | 3315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 3.81e-21 | 2 |
lobe parts of cerebral cortex | 3.81e-21 | 2 |
hippocampal formation | 3.81e-21 | 2 |
limbic lobe | 3.81e-21 | 2 |
middle frontal gyrus | 6.96e-21 | 2 |
regional part of cerebral cortex | 3.01e-16 | 22 |
cerebral cortex | 1.78e-14 | 25 |
pallium | 1.78e-14 | 25 |
frontal cortex | 2.09e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.17e-12 | 53 |
regional part of brain | 2.17e-12 | 53 |
neural tube | 8.95e-12 | 56 |
neural rod | 8.95e-12 | 56 |
future spinal cord | 8.95e-12 | 56 |
neural keel | 8.95e-12 | 56 |
regional part of telencephalon | 1.38e-11 | 32 |
cerebral hemisphere | 1.38e-11 | 32 |
nervous system | 2.13e-11 | 89 |
brain grey matter | 5.68e-11 | 34 |
gray matter | 5.68e-11 | 34 |
telencephalon | 5.68e-11 | 34 |
brain | 1.03e-09 | 68 |
future brain | 1.03e-09 | 68 |
limbic system | 2.74e-09 | 5 |
regional part of forebrain | 2.82e-09 | 41 |
forebrain | 2.82e-09 | 41 |
anterior neural tube | 2.82e-09 | 41 |
future forebrain | 2.82e-09 | 41 |
occipital lobe | 3.22e-09 | 5 |
neocortex | 1.59e-08 | 20 |
neural plate | 2.75e-08 | 82 |
presumptive neural plate | 2.75e-08 | 82 |
neurectoderm | 6.20e-08 | 86 |
cerebellum | 6.34e-08 | 6 |
rhombic lip | 6.34e-08 | 6 |
gyrus | 7.25e-08 | 6 |