FFCP PHASE1:Hg19::chr1:47903201..47903211,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:47903201..47903211,-
|short_description=p@chr1:47903201..47903211,-
|description=CAGE_peak_at_chr1:47903201..47903211,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:47903201..47903211,- | |||
|description=CAGE_peak_at_chr1:47903201..47903211,- | |||
|id=chr1:47903201..47903211,- | |||
|ontology_enrichment_celltype=CL:0000838!8.02e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002202;5.63e-09;9!CL:0002632;5.63e-09;9!CL:0000322;2.55e-07;3!CL:0000307;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,7.45e-09,9;CL:0002632,7.45e-09,9;CL:0000068,2.97e-07,3;CL:0000069,2.97e-07,3;CL:0000307,2.97e-07,3;CL:0000377,2.97e-07,3;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.47e-19;1!UBERON:0004874;2.47e-19;1!CL:0000377;2.55e-07;3 | |||
|ontology_enrichment_disease=DOID:162!2.93e-16!235;DOID:305!4.35e-16!106;DOID:14566!2.01e-15!239;DOID:0050687!1.25e-14!143 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.37e-10;2!DOID:1036;5.54e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.58e-10,2;DOID:1036,6.94e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.66e-08!155;UBERON:0001555!3.66e-08!155;UBERON:0007026!3.66e-08!155;UBERON:0004921!2.19e-07!129;UBERON:0004185!2.19e-07!129;UBERON:0004119!2.30e-07!169;UBERON:0000925!2.30e-07!169;UBERON:0006595!2.30e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.47e-19;1!UBERON:0000989;2.47e-19;1!UBERON:0000997;2.47e-19;1!UBERON:0008811;2.47e-19;1!UBERON:0005056;2.47e-19;1!UBERON:0004176;2.47e-19;1!UBERON:0002360;2.37e-10;2!UBERON:0004903;2.37e-10;2!UBERON:0000094;2.37e-10;2!UBERON:0010743;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.30e-19,1;UBERON:0007645,1.30e-19,1;UBERON:0007647,1.30e-19,1;UBERON:0010115,1.30e-19,1;UBERON:0000997,1.56e-19,1;UBERON:0005056,1.56e-19,1;UBERON:0000989,1.88e-19,1;UBERON:0008811,1.88e-19,1;UBERON:0006258,1.88e-19,1;UBERON:0005876,1.88e-19,1;UBERON:0004874,1.88e-19,1;UBERON:0002360,1.72e-10,2;UBERON:0000094,1.72e-10,2;UBERON:0010743,1.72e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
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| ||
|short_description=p@chr1:47903201..47903211,- | |||
}} | }} |
Latest revision as of 08:53, 28 July 2015
Short description: | p@chr1:47903201..47903211, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:47903201..47903211, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 7.45e-09 | 9 |
epithelial cell of lower respiratory tract | 7.45e-09 | 9 |
duct epithelial cell | 2.97e-07 | 3 |
branched duct epithelial cell | 2.97e-07 | 3 |
tracheal epithelial cell | 2.97e-07 | 3 |
tracheoblast | 2.97e-07 | 3 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.30e-19 | 1 |
future meninx | 1.30e-19 | 1 |
ectomeninx | 1.30e-19 | 1 |
future dura mater | 1.30e-19 | 1 |
mammalian vulva | 1.56e-19 | 1 |
external female genitalia | 1.56e-19 | 1 |
penis | 1.88e-19 | 1 |
intromittent organ | 1.88e-19 | 1 |
lateral plate mesenchyme | 1.88e-19 | 1 |
undifferentiated genital tubercle | 1.88e-19 | 1 |
somatopleure | 1.88e-19 | 1 |
meninx | 1.72e-10 | 2 |
membrane organ | 1.72e-10 | 2 |
meningeal cluster | 1.72e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.58e-10 | 2 |
chronic leukemia | 6.94e-10 | 8 |