FFCP PHASE1:Hg19::chr11:18270208..18270221,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6289,100528017 | |EntrezGene=6289,100528017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10514,39550 | |HGNC=10514,39550 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAK9,P02735 | |UniProt=G3XAK9,P02735 | ||
|association_with_transcript=0bp_to_NM_001127380,NM_001199744,NM_030754_5end | |association_with_transcript=0bp_to_NM_001127380,NM_001199744,NM_030754_5end | ||
|cluster_id=chr11:18270208..18270221,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_SAA2-SAA4_5end,CAGE_peak_1_at_SAA2_5end | |description=CAGE_peak_1_at_SAA2-SAA4_5end,CAGE_peak_1_at_SAA2_5end | ||
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|ontology_enrichment_celltype=CL:0000066!8.13e-15!254;CL:0000223!2.28e-14!59;CL:0002076!1.57e-11!43;CL:0002166!4.32e-09!3;CL:0002368!4.50e-09!13;CL:0000068!5.95e-09!3;CL:0000069!5.95e-09!3;CL:0000307!5.95e-09!3;CL:0000377!5.95e-09!3 | |ontology_enrichment_celltype=CL:0000066!8.13e-15!254;CL:0000223!2.28e-14!59;CL:0002076!1.57e-11!43;CL:0002166!4.32e-09!3;CL:0002368!4.50e-09!13;CL:0000068!5.95e-09!3;CL:0000069!5.95e-09!3;CL:0000307!5.95e-09!3;CL:0000377!5.95e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.37e-17;12!CL:0000054;1.70e-07;2!CL:0000137;1.70e-07;2!CL:0000092;1.70e-07;2!CL:1000415;1.70e-07;2 | |ontology_enrichment_celltype_v019=CL:0000182;3.37e-17;12!CL:0000054;1.70e-07;2!CL:0000137;1.70e-07;2!CL:0000092;1.70e-07;2!CL:1000415;1.70e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.45e-17,12;CL:0000054,1.54e-07,2;CL:0000137,1.54e-07,2;CL:0000092,1.54e-07,2;CL:0000223,1.85e-07,58;CL:1000415,2.40e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.13e-09;13 | |ontology_enrichment_development_v019=UBERON:0009497;3.13e-09;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.04e-13;1!DOID:3165;1.04e-13;1!DOID:0060121;1.04e-13;1!DOID:2438;1.04e-13;1!DOID:4418;1.04e-13;1!DOID:200;1.70e-07;2!DOID:4305;1.70e-07;2 | |ontology_enrichment_disease_v019=DOID:0060085;1.04e-13;1!DOID:3165;1.04e-13;1!DOID:0060121;1.04e-13;1!DOID:2438;1.04e-13;1!DOID:4418;1.04e-13;1!DOID:200;1.70e-07;2!DOID:4305;1.70e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,8.58e-14,1;DOID:3165,8.58e-14,1;DOID:0060121,8.58e-14,1;DOID:2438,8.58e-14,1;DOID:4418,8.58e-14,1;DOID:200,1.54e-07,2;DOID:4305,1.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.91e-09!169;UBERON:0000925!6.91e-09!169;UBERON:0006595!6.91e-09!169;UBERON:0003929!1.04e-08!54;UBERON:0002530!1.39e-08!59;UBERON:0005911!1.03e-07!82;UBERON:0005172!1.87e-07!55;UBERON:0005173!1.87e-07!55;UBERON:0003104!2.45e-07!238;UBERON:0009142!2.45e-07!238;UBERON:0005177!3.14e-07!107;UBERON:0001004!4.86e-07!72;UBERON:0001708!6.83e-07!4;UBERON:0001704!6.83e-07!4;UBERON:0002365!6.92e-07!31;UBERON:0002330!6.92e-07!31;UBERON:0002368!7.47e-07!35;UBERON:0000466!9.01e-07!126 | |ontology_enrichment_uberon=UBERON:0004119!6.91e-09!169;UBERON:0000925!6.91e-09!169;UBERON:0006595!6.91e-09!169;UBERON:0003929!1.04e-08!54;UBERON:0002530!1.39e-08!59;UBERON:0005911!1.03e-07!82;UBERON:0005172!1.87e-07!55;UBERON:0005173!1.87e-07!55;UBERON:0003104!2.45e-07!238;UBERON:0009142!2.45e-07!238;UBERON:0005177!3.14e-07!107;UBERON:0001004!4.86e-07!72;UBERON:0001708!6.83e-07!4;UBERON:0001704!6.83e-07!4;UBERON:0002365!6.92e-07!31;UBERON:0002330!6.92e-07!31;UBERON:0002368!7.47e-07!35;UBERON:0000466!9.01e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.61e-24;25!UBERON:0002107;1.15e-16;19!UBERON:0006925;1.15e-16;19!UBERON:0002294;1.72e-16;7!UBERON:0001173;1.72e-16;7!UBERON:0001282;1.04e-13;1!UBERON:0009842;1.04e-13;1!UBERON:0003704;1.04e-13;1!UBERON:0001171;1.04e-13;1!UBERON:0001172;1.04e-13;1!UBERON:0002394;2.50e-13;4!UBERON:0003928;2.50e-13;4!UBERON:0002365;3.43e-10;31!UBERON:0002330;3.43e-10;31!UBERON:0005172;7.64e-09;52!UBERON:0005173;7.64e-09;52!UBERON:0002368;1.65e-08;33!UBERON:0003126;5.28e-08;7!UBERON:0001005;5.28e-08;7!UBERON:0003127;1.70e-07;2!UBERON:0006562;1.70e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002423;4.61e-24;25!UBERON:0002107;1.15e-16;19!UBERON:0006925;1.15e-16;19!UBERON:0002294;1.72e-16;7!UBERON:0001173;1.72e-16;7!UBERON:0001282;1.04e-13;1!UBERON:0009842;1.04e-13;1!UBERON:0003704;1.04e-13;1!UBERON:0001171;1.04e-13;1!UBERON:0001172;1.04e-13;1!UBERON:0002394;2.50e-13;4!UBERON:0003928;2.50e-13;4!UBERON:0002365;3.43e-10;31!UBERON:0002330;3.43e-10;31!UBERON:0005172;7.64e-09;52!UBERON:0005173;7.64e-09;52!UBERON:0002368;1.65e-08;33!UBERON:0003126;5.28e-08;7!UBERON:0001005;5.28e-08;7!UBERON:0003127;1.70e-07;2!UBERON:0006562;1.70e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,5.04e-24,25;UBERON:0000015,5.04e-24,25;UBERON:0002423,5.04e-24,25;UBERON:0006235,5.04e-24,25;UBERON:0004161,5.04e-24,25;UBERON:0008835,2.22e-20,22;UBERON:0003894,2.22e-20,22;UBERON:0009854,1.75e-19,23;UBERON:0007499,6.63e-18,25;UBERON:0009856,3.31e-17,26;UBERON:0002107,1.17e-16,19;UBERON:0006925,1.17e-16,19;UBERON:0008836,1.17e-16,19;UBERON:0001282,1.10e-13,1;UBERON:0009842,1.10e-13,1;UBERON:0003704,1.10e-13,1;UBERON:0001171,1.10e-13,1;UBERON:0001172,1.10e-13,1;UBERON:0002294,6.39e-13,9;UBERON:0001173,6.39e-13,9;UBERON:0004912,6.39e-13,9;UBERON:0003929,7.84e-11,54;UBERON:0005172,8.47e-11,54;UBERON:0005173,8.47e-11,54;UBERON:0002365,3.42e-10,31;UBERON:0002330,3.42e-10,31;UBERON:0002417,1.17e-09,60;UBERON:0000916,1.17e-09,60;UBERON:0002394,3.02e-09,6;UBERON:0003928,3.02e-09,6;UBERON:0002368,5.12e-09,35;UBERON:0005177,5.42e-09,101;UBERON:0001041,1.95e-08,87;UBERON:0009569,5.28e-08,112;UBERON:0003126,5.28e-08,7;UBERON:0001005,5.28e-08,7;UBERON:0003127,1.45e-07,2;UBERON:0004921,1.64e-07,118;UBERON:0001007,2.43e-07,145;UBERON:0001555,2.43e-07,145;UBERON:0007026,2.43e-07,145;UBERON:0005256,2.74e-07,122;UBERON:0000949,5.48e-07,45;UBERON:0005911,6.40e-07,82 | |||
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| ||
|short_description=p1@SAA2-SAA4,p1@SAA2 | |short_description=p1@SAA2-SAA4,p1@SAA2 | ||
}} | }} |
Latest revision as of 02:14, 17 September 2015
Short description: | p1@SAA2-SAA4, p1@SAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SAA2-SAA4_5end, CAGE_peak_1_at_SAA2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NM_001127380, NM_001199744, NM_030754_5end |
EntrezGene: | 6289,100528017 |
HGNC: | 39550&submit=Submit 10514, 39550 |
UniProt: | G3XAK9P02735 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.45e-17 | 12 |
bone matrix secreting cell | 1.54e-07 | 2 |
osteocyte | 1.54e-07 | 2 |
osteoclast | 1.54e-07 | 2 |
endodermal cell | 1.85e-07 | 58 |
epithelial cell of gall bladder | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 8.58e-14 | 1 |
skin benign neoplasm | 8.58e-14 | 1 |
integumentary system benign neoplasm | 8.58e-14 | 1 |
dermis tumor | 8.58e-14 | 1 |
cutaneous fibrous histiocytoma | 8.58e-14 | 1 |
giant cell tumor | 1.54e-07 | 2 |
bone giant cell tumor | 1.54e-07 | 2 |