FFCP PHASE1:Hg19::chr1:4714687..4714694,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:4714687..4714694,+
|short_description=p3@AJAP1
|description=CAGE_peak_3_at_AJAP1_5end
|association_with_transcript=-97bp_to_ENST00000378190_5end
|EntrezGe...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55966 | |EntrezGene=55966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30801 | |HGNC=30801 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKB5 | |UniProt=Q9UKB5 | ||
|association_with_transcript=-97bp_to_ENST00000378190_5end | |||
|cluster_id=chr1:4714687..4714694,+ | |||
|description=CAGE_peak_3_at_AJAP1_5end | |||
|id=chr1:4714687..4714694,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;9.49e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.33e-10,1;CL:0000062,1.20e-08,11;CL:0000375,1.20e-08,11;CL:0000335,1.20e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.24e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.79e-11;1!DOID:3165;2.79e-11;1!DOID:0060121;2.79e-11;1!DOID:2438;2.79e-11;1!DOID:4418;2.79e-11;1!DOID:2152;9.49e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.53e-11,1;DOID:3165,2.53e-11,1;DOID:0060121,2.53e-11,1;DOID:2438,2.53e-11,1;DOID:4418,2.53e-11,1;DOID:2152,1.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.95e-40!57;UBERON:0005068!1.95e-40!57;UBERON:0006241!1.95e-40!57;UBERON:0007135!1.95e-40!57;UBERON:0002616!1.89e-34!59;UBERON:0002020!2.63e-33!34;UBERON:0003528!2.63e-33!34;UBERON:0001893!4.26e-33!34;UBERON:0002791!1.23e-31!33;UBERON:0000955!6.75e-31!69;UBERON:0006238!6.75e-31!69;UBERON:0002780!1.32e-30!41;UBERON:0001890!1.32e-30!41;UBERON:0006240!1.32e-30!41;UBERON:0001869!3.37e-30!32;UBERON:0003080!1.16e-29!42;UBERON:0001017!7.59e-29!82;UBERON:0007023!1.65e-28!115;UBERON:0005743!1.89e-28!86;UBERON:0003075!3.85e-27!86;UBERON:0007284!3.85e-27!86;UBERON:0002346!1.19e-26!90;UBERON:0000073!1.66e-24!94;UBERON:0001016!1.66e-24!94;UBERON:0000153!2.08e-24!129;UBERON:0007811!2.08e-24!129;UBERON:0002619!6.76e-24!22;UBERON:0000033!4.85e-23!123;UBERON:0000956!1.41e-22!25;UBERON:0000203!1.41e-22!25;UBERON:0001950!1.10e-20!20;UBERON:0003056!1.31e-20!61;UBERON:0000924!4.51e-15!173;UBERON:0006601!4.51e-15!173;UBERON:0004121!5.05e-15!169;UBERON:0002308!2.44e-12!9;UBERON:0000125!2.44e-12!9;UBERON:0003076!1.15e-11!15;UBERON:0003057!1.15e-11!15;UBERON:0004733!3.79e-10!12;UBERON:0002028!3.79e-10!12;UBERON:0007277!3.79e-10!12;UBERON:0002298!3.80e-10!8;UBERON:0002420!1.34e-09!9;UBERON:0007245!1.34e-09!9;UBERON:0010009!1.34e-09!9;UBERON:0010011!1.34e-09!9;UBERON:0000454!1.34e-09!9;UBERON:0009663!2.42e-09!7;UBERON:0004732!3.25e-09!13;UBERON:0000475!1.01e-08!365;UBERON:0001871!1.70e-08!7;UBERON:0000064!2.71e-08!219;UBERON:0000200!3.77e-08!6;UBERON:0000119!5.15e-08!312;UBERON:0000483!7.97e-08!309;UBERON:0002021!5.42e-07!5;UBERON:0000477!5.71e-07!286;UBERON:0000025!7.91e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.58e-39;22!UBERON:0001950;3.36e-35;20!UBERON:0000956;8.13e-35;25!UBERON:0000203;8.13e-35;25!UBERON:0002791;7.95e-33;32!UBERON:0002021;1.28e-30;5!UBERON:0003528;1.36e-29;34!UBERON:0002020;1.36e-29;34!UBERON:0001869;7.80e-28;32!UBERON:0001893;9.56e-27;34!UBERON:0002780;9.75e-24;41!UBERON:0001890;9.75e-24;41!UBERON:0001872;1.02e-17;5!UBERON:0000073;4.26e-13;53!UBERON:0002616;4.26e-13;53!UBERON:0002581;9.49e-11;1!UBERON:0002902;9.49e-11;1!UBERON:0002038;9.49e-11;1!UBERON:0004911;9.49e-11;1!UBERON:0009661;9.49e-11;1!UBERON:0002950;9.49e-11;1!UBERON:0009899;9.49e-11;1!UBERON:0001891;9.49e-11;1!UBERON:0001017;1.03e-07;75!UBERON:0000955;2.96e-07;68!UBERON:0000200;3.46e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.03e-39,22;UBERON:0002791,3.54e-39,32;UBERON:0003528,7.69e-37,34;UBERON:0002020,7.69e-37,34;UBERON:0001893,7.69e-37,34;UBERON:0001950,2.87e-35,20;UBERON:0000956,5.57e-35,25;UBERON:0000203,5.57e-35,25;UBERON:0001869,5.87e-33,32;UBERON:0002021,6.17e-31,5;UBERON:0002780,2.08e-30,41;UBERON:0001890,2.08e-30,41;UBERON:0003080,2.08e-30,41;UBERON:0006240,2.08e-30,41;UBERON:0000073,2.97e-23,53;UBERON:0002616,2.97e-23,53;UBERON:0001049,6.20e-22,56;UBERON:0005068,6.20e-22,56;UBERON:0006241,6.20e-22,56;UBERON:0007135,6.20e-22,56;UBERON:0003056,5.11e-20,61;UBERON:0001872,1.56e-17,5;UBERON:0000955,1.61e-17,68;UBERON:0006238,1.61e-17,68;UBERON:0001017,3.59e-17,81;UBERON:0001016,2.72e-15,89;UBERON:0003075,1.74e-14,82;UBERON:0007284,1.74e-14,82;UBERON:0002346,9.85e-14,86;UBERON:0010371,4.69e-11,104;UBERON:0002902,6.14e-11,1;UBERON:0009899,6.14e-11,1;UBERON:0004911,1.33e-10,1;UBERON:0002581,1.61e-10,1;UBERON:0002038,1.77e-10,1;UBERON:0009661,1.77e-10,1;UBERON:0002950,1.77e-10,1;UBERON:0001891,1.77e-10,1;UBERON:0009616,1.77e-10,1;UBERON:0010286,1.77e-10,1;UBERON:0007023,5.12e-10,114;UBERON:0010314,6.74e-10,132;UBERON:0000200,4.05e-07,6;UBERON:0004121,4.26e-07,171;UBERON:0000924,4.26e-07,171;UBERON:0006601,4.26e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,3.20493126864202,2.31026599777646,0,0,0,0,0,0.15350367472613,0.827019434907183,0,0,0.340906509664404,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56512055366511,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.442317039724898,0.886642856860642,2.19385397153973,0,0,0.230850775511391,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0.17472666824203,0,0,0,0,0,0,0,0.959293472527256,3.57686301065381,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0.2249738915515,0,0.850493793212345,0,0.315222829196793,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0.976210119215705,0.876336514945499,0.573409195690071,0.110929051536852,0.683060432355218,0,0,0,0,0,0,0.28984205722165,0.447764408660622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.899209151350433,0,1.43670473151436,1.43581454968528,3.02486035466062,1.45230230174858,0.645902582527404,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0.526472298444801,0,0,0,0.163771917510097,0,0.540300676947157,0,2.27355476151302,1.33173201407204,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,1.18390992413128,0,0,0.156986185701028,0.471346769748006,0,0,0,0,0.428859265059938,0,0,0,0,0,0.17071847709395,0,0,0,0,0,1.3746412112643,0,0,1.23040974977572,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0,1.14671666521161,0,1.42782129400921,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0.305966489225945,0,0.551369397209069,0,0.0757786982182394,0,0,0.517164979309476,0,0.23806443146374,0.0645889098360061,0.0620747142958579,1.23345048838675,0.12729431655633,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,3.20493126864202,2.31026599777646,0,0,0,0,0,0.15350367472613,0.827019434907183,0,0,0.340906509664404,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56512055366511,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.442317039724898,0.886642856860642,2.19385397153973,0,0,0.230850775511391,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0.17472666824203,0,0,0,0,0,0,0,0.959293472527256,3.57686301065381,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0.2249738915515,0,0.850493793212345,0,0.315222829196793,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0.976210119215705,0.876336514945499,0.573409195690071,0.110929051536852,0.683060432355218,0,0,0,0,0,0,0.28984205722165,0.447764408660622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.899209151350433,0,1.43670473151436,1.43581454968528,3.02486035466062,1.45230230174858,0.645902582527404,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0.526472298444801,0,0,0,0.163771917510097,0,0.540300676947157,0,2.27355476151302,1.33173201407204,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,1.18390992413128,0,0,0.156986185701028,0.471346769748006,0,0,0,0,0.428859265059938,0,0,0,0,0,0.17071847709395,0,0,0,0,0,1.3746412112643,0,0,1.23040974977572,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0,1.14671666521161,0,1.42782129400921,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0.305966489225945,0,0.551369397209069,0,0.0757786982182394,0,0,0.517164979309476,0,0.23806443146374,0.0645889098360061,0.0620747142958579,1.23345048838675,0.12729431655633,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p3@AJAP1 | |||
}} | }} |
Latest revision as of 09:29, 18 September 2015
Short description: | p3@AJAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AJAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_ENST00000378190_5end |
EntrezGene: | AJAP1 |
HGNC: | 30801 |
UniProt: | Q9UKB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.33e-10 | 1 |
osteoblast | 1.20e-08 | 11 |
osteoprogenitor cell | 1.20e-08 | 11 |
mesenchyme condensation cell | 1.20e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.53e-11 | 1 |
skin benign neoplasm | 2.53e-11 | 1 |
integumentary system benign neoplasm | 2.53e-11 | 1 |
dermis tumor | 2.53e-11 | 1 |
cutaneous fibrous histiocytoma | 2.53e-11 | 1 |
ovary epithelial cancer | 1.33e-10 | 1 |