FFCP PHASE1:Hg19::chr22:37640236..37640252,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5880 | |EntrezGene=5880 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9802 | |HGNC=9802 | ||
|TSSclassifier=strong | |||
|UniProt=B1AH79 | |UniProt=B1AH79 | ||
|association_with_transcript=35bp_to_ENST00000401529_5end | |association_with_transcript=35bp_to_ENST00000401529_5end | ||
|cluster_id=chr22:37640236..37640252,- | |||
|coexpression_cluster_id=C4097 | |coexpression_cluster_id=C4097 | ||
|description=CAGE_peak_2_at_RAC2_5end | |description=CAGE_peak_2_at_RAC2_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.42e-62!172;CL:0000566!1.42e-62!172;CL:0000988!2.51e-59!182;CL:0002032!9.08e-59!165;CL:0000837!9.08e-59!165;CL:0000738!3.22e-51!140;CL:0002031!1.21e-44!124;CL:0002087!1.88e-43!119;CL:0000763!2.89e-35!112;CL:0000049!2.89e-35!112;CL:0000766!1.65e-28!76;CL:0000839!7.77e-24!70;CL:0000557!1.61e-23!71;CL:0002194!9.20e-21!63;CL:0000576!9.20e-21!63;CL:0000040!9.20e-21!63;CL:0000559!9.20e-21!63;CL:0000542!2.20e-20!53;CL:0000051!2.20e-20!53;CL:0002009!2.31e-20!65;CL:0000838!4.25e-20!52;CL:0002057!9.27e-20!42;CL:0000860!3.19e-16!45;CL:0000134!7.03e-16!358;CL:0002320!1.51e-14!365;CL:0000048!1.57e-14!430;CL:0000723!4.15e-14!436;CL:0000034!2.49e-13!444;CL:0000084!2.66e-11!25;CL:0000827!2.66e-11!25;CL:0000791!3.11e-09!18;CL:0000789!3.11e-09!18;CL:0002420!3.11e-09!18;CL:0002419!3.11e-09!18;CL:0000790!3.11e-09!18;CL:0000945!8.85e-09!24;CL:0000826!8.85e-09!24;CL:0000219!1.69e-08!390;CL:0002371!1.53e-07!591;CL:0000625!8.80e-07!11 | |ontology_enrichment_celltype=CL:0000037!1.42e-62!172;CL:0000566!1.42e-62!172;CL:0000988!2.51e-59!182;CL:0002032!9.08e-59!165;CL:0000837!9.08e-59!165;CL:0000738!3.22e-51!140;CL:0002031!1.21e-44!124;CL:0002087!1.88e-43!119;CL:0000763!2.89e-35!112;CL:0000049!2.89e-35!112;CL:0000766!1.65e-28!76;CL:0000839!7.77e-24!70;CL:0000557!1.61e-23!71;CL:0002194!9.20e-21!63;CL:0000576!9.20e-21!63;CL:0000040!9.20e-21!63;CL:0000559!9.20e-21!63;CL:0000542!2.20e-20!53;CL:0000051!2.20e-20!53;CL:0002009!2.31e-20!65;CL:0000838!4.25e-20!52;CL:0002057!9.27e-20!42;CL:0000860!3.19e-16!45;CL:0000134!7.03e-16!358;CL:0002320!1.51e-14!365;CL:0000048!1.57e-14!430;CL:0000723!4.15e-14!436;CL:0000034!2.49e-13!444;CL:0000084!2.66e-11!25;CL:0000827!2.66e-11!25;CL:0000791!3.11e-09!18;CL:0000789!3.11e-09!18;CL:0002420!3.11e-09!18;CL:0002419!3.11e-09!18;CL:0000790!3.11e-09!18;CL:0000945!8.85e-09!24;CL:0000826!8.85e-09!24;CL:0000219!1.69e-08!390;CL:0002371!1.53e-07!591;CL:0000625!8.80e-07!11 | ||
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|ontology_enrichment_development_v019=CL:0002057;1.75e-14;42!CL:0000051;1.98e-12;53!CL:0000049;3.16e-11;108!CL:0000790;2.53e-09;18 | |ontology_enrichment_development_v019=CL:0002057;1.75e-14;42!CL:0000051;1.98e-12;53!CL:0000049;3.16e-11;108!CL:0000790;2.53e-09;18 | ||
|ontology_enrichment_disease=DOID:2531!1.31e-14!51;DOID:0060083!1.31e-14!51;DOID:1240!1.51e-12!39;DOID:8692!2.64e-10!31 | |ontology_enrichment_disease=DOID:2531!1.31e-14!51;DOID:0060083!1.31e-14!51;DOID:1240!1.51e-12!39;DOID:8692!2.64e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.95e-10;31!DOID:1240;6.30e-10;39!DOID:2531;3.30e-09;51!DOID:0060083;3.30e-09;51 | |ontology_enrichment_disease_v019=DOID:8692;4.95e-10;31!DOID:1240;6.30e-10;39!DOID:2531;3.30e-09;51!DOID:0060083;3.30e-09;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,9.42e-15,51;DOID:0060083,9.42e-15,51;DOID:1240,1.15e-12,39;DOID:8692,2.12e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.69e-34!112;UBERON:0002390!2.40e-31!102;UBERON:0003061!2.40e-31!102;UBERON:0003081!1.26e-27!216;UBERON:0002371!1.55e-21!80;UBERON:0002405!4.15e-20!115;UBERON:0001474!2.67e-17!86;UBERON:0002384!2.03e-13!375;UBERON:0004765!2.94e-12!101;UBERON:0001434!2.94e-12!101;UBERON:0004535!1.78e-10!110;UBERON:0001009!3.96e-10!113;UBERON:0002204!9.53e-09!167;UBERON:0000055!1.38e-08!69;UBERON:0000178!2.77e-08!15;UBERON:0000179!2.77e-08!15;UBERON:0000463!2.77e-08!15;UBERON:0001981!8.42e-07!60;UBERON:0007500!8.42e-07!60;UBERON:0004537!8.42e-07!60;UBERON:0006965!8.42e-07!60;UBERON:0004872!9.90e-07!84 | |ontology_enrichment_uberon=UBERON:0002193!3.69e-34!112;UBERON:0002390!2.40e-31!102;UBERON:0003061!2.40e-31!102;UBERON:0003081!1.26e-27!216;UBERON:0002371!1.55e-21!80;UBERON:0002405!4.15e-20!115;UBERON:0001474!2.67e-17!86;UBERON:0002384!2.03e-13!375;UBERON:0004765!2.94e-12!101;UBERON:0001434!2.94e-12!101;UBERON:0004535!1.78e-10!110;UBERON:0001009!3.96e-10!113;UBERON:0002204!9.53e-09!167;UBERON:0000055!1.38e-08!69;UBERON:0000178!2.77e-08!15;UBERON:0000179!2.77e-08!15;UBERON:0000463!2.77e-08!15;UBERON:0001981!8.42e-07!60;UBERON:0007500!8.42e-07!60;UBERON:0004537!8.42e-07!60;UBERON:0006965!8.42e-07!60;UBERON:0004872!9.90e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-08;15!UBERON:0000179;2.34e-08;15!UBERON:0000463;2.34e-08;15!UBERON:0002193;4.31e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-08;15!UBERON:0000179;2.34e-08;15!UBERON:0000463;2.34e-08;15!UBERON:0002193;4.31e-07;42 | ||
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| ||
|short_description=p2@RAC2 | |short_description=p2@RAC2 | ||
}} | }} |
Latest revision as of 04:45, 20 September 2015
Short description: | p2@RAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAC2_5end |
Coexpression cluster: | C4097_Neutrophils_Mast_Eosinophils_Macrophage_CD4_acute_Whole |
Association with transcript: | 35bp_to_ENST00000401529_5end |
EntrezGene: | RAC2 |
HGNC: | 9802 |
UniProt: | B1AH79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.53e-38 | 108 |
hematopoietic system | 6.32e-35 | 98 |
blood island | 6.32e-35 | 98 |
lateral plate mesoderm | 1.38e-32 | 203 |
immune system | 3.63e-30 | 93 |
bone marrow | 9.92e-25 | 76 |
bone element | 3.70e-20 | 82 |
skeletal element | 2.28e-17 | 90 |
connective tissue | 1.37e-13 | 371 |
skeletal system | 6.80e-13 | 100 |
mesoderm | 2.22e-12 | 315 |
mesoderm-derived structure | 2.22e-12 | 315 |
presumptive mesoderm | 2.22e-12 | 315 |
cardiovascular system | 1.58e-10 | 109 |
circulatory system | 3.55e-10 | 112 |
vessel | 8.05e-09 | 68 |
musculoskeletal system | 8.26e-09 | 167 |
blood | 2.34e-08 | 15 |
haemolymphatic fluid | 2.34e-08 | 15 |
organism substance | 2.34e-08 | 15 |
epithelial tube open at both ends | 5.33e-07 | 59 |
blood vessel | 5.33e-07 | 59 |
blood vasculature | 5.33e-07 | 59 |
vascular cord | 5.33e-07 | 59 |
splanchnic layer of lateral plate mesoderm | 6.81e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.42e-15 | 51 |
immune system cancer | 9.42e-15 | 51 |
leukemia | 1.15e-12 | 39 |
myeloid leukemia | 2.12e-10 | 31 |