FFCP PHASE1:Hg19::chr13:110434090..110434101,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110434090..110434101,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_at_chr13:110434090..110434101,- | |description=CAGE_peak_at_chr13:110434090..110434101,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!1.74e-12!15;CL:0000325!3.96e-07!39 | |ontology_enrichment_celltype=CL:0000136!1.74e-12!15;CL:0000325!3.96e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.27e-51;13!CL:0002615;5.42e-21;3!CL:0002617;9.73e-15;2!CL:0002561;1.37e-14;2!CL:0002623;5.73e-10;3!CL:0002553;7.85e-08;1 | |ontology_enrichment_celltype_v019=CL:0000136;3.27e-51;13!CL:0002615;5.42e-21;3!CL:0002617;9.73e-15;2!CL:0002561;1.37e-14;2!CL:0002623;5.73e-10;3!CL:0002553;7.85e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.92e-44,15;CL:0002615,3.87e-21,3;CL:0002617,9.10e-15,2;CL:0002561,1.04e-14,2;CL:0002623,6.57e-10,3;CL:0002553,7.10e-08,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!1.02e-13!42;UBERON:0002780!5.81e-13!41;UBERON:0001890!5.81e-13!41;UBERON:0006240!5.81e-13!41;UBERON:0000924!1.32e-12!173;UBERON:0006601!1.32e-12!173;UBERON:0003056!4.67e-12!61;UBERON:0004121!1.09e-11!169;UBERON:0000033!1.24e-11!123;UBERON:0000153!2.17e-11!129;UBERON:0007811!2.17e-11!129;UBERON:0001049!2.80e-11!57;UBERON:0005068!2.80e-11!57;UBERON:0006241!2.80e-11!57;UBERON:0007135!2.80e-11!57;UBERON:0007023!3.83e-11!115;UBERON:0002020!3.26e-10!34;UBERON:0003528!3.26e-10!34;UBERON:0000475!4.54e-10!365;UBERON:0001869!4.85e-10!32;UBERON:0001893!6.96e-10!34;UBERON:0002616!8.10e-10!59;UBERON:0002346!1.54e-09!90;UBERON:0002791!2.42e-09!33;UBERON:0000955!1.09e-08!69;UBERON:0006238!1.09e-08!69;UBERON:0003075!1.31e-08!86;UBERON:0007284!1.31e-08!86;UBERON:0000073!1.58e-07!94;UBERON:0001016!1.58e-07!94;UBERON:0001017!2.35e-07!82;UBERON:0000064!3.56e-07!219 | |ontology_enrichment_uberon=UBERON:0003080!1.02e-13!42;UBERON:0002780!5.81e-13!41;UBERON:0001890!5.81e-13!41;UBERON:0006240!5.81e-13!41;UBERON:0000924!1.32e-12!173;UBERON:0006601!1.32e-12!173;UBERON:0003056!4.67e-12!61;UBERON:0004121!1.09e-11!169;UBERON:0000033!1.24e-11!123;UBERON:0000153!2.17e-11!129;UBERON:0007811!2.17e-11!129;UBERON:0001049!2.80e-11!57;UBERON:0005068!2.80e-11!57;UBERON:0006241!2.80e-11!57;UBERON:0007135!2.80e-11!57;UBERON:0007023!3.83e-11!115;UBERON:0002020!3.26e-10!34;UBERON:0003528!3.26e-10!34;UBERON:0000475!4.54e-10!365;UBERON:0001869!4.85e-10!32;UBERON:0001893!6.96e-10!34;UBERON:0002616!8.10e-10!59;UBERON:0002346!1.54e-09!90;UBERON:0002791!2.42e-09!33;UBERON:0000955!1.09e-08!69;UBERON:0006238!1.09e-08!69;UBERON:0003075!1.31e-08!86;UBERON:0007284!1.31e-08!86;UBERON:0000073!1.58e-07!94;UBERON:0001016!1.58e-07!94;UBERON:0001017!2.35e-07!82;UBERON:0000064!3.56e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.87e-18;6!UBERON:0002358;3.87e-18;6!UBERON:0003684;3.87e-18;6!UBERON:0001178;3.87e-18;6!UBERON:0005933;1.37e-14;2!UBERON:0005942;1.37e-14;2!UBERON:0005932;1.37e-14;2!UBERON:0004457;3.72e-12;9!UBERON:0000042;3.72e-12;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.87e-18;6!UBERON:0002358;3.87e-18;6!UBERON:0003684;3.87e-18;6!UBERON:0001178;3.87e-18;6!UBERON:0005933;1.37e-14;2!UBERON:0005942;1.37e-14;2!UBERON:0005932;1.37e-14;2!UBERON:0004457;3.72e-12;9!UBERON:0000042;3.72e-12;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.18e-18,6;UBERON:0002358,3.18e-18,6;UBERON:0003684,3.18e-18,6;UBERON:0001178,3.18e-18,6;UBERON:0005933,1.04e-14,2;UBERON:0005942,1.04e-14,2;UBERON:0005932,1.04e-14,2;UBERON:0004457,3.42e-09,12;UBERON:0000042,3.42e-09,12 | |||
|phase1_expression=3.99692434395225,2.78330681058278,2.67813367782345,7.00513088471913,1.78784437770915,0.872338524100369,2.53299878168311,0.631719873426831,0.522371256399677,0.491467873003018,0,0.218441372130172,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.283604451492204,0,0.351339142772504,0.392937226493138,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0.312160076830321,0,0.597794722207204,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.619954687054593,0,0.247266929278557,0.910161361938026,0,0,0.375355559615893,0.554128230968366,0,0,0.150238058906597,0,0.179389635688862,0,0.635795703478686,0.900273288253207,0.309157587715317,0.257640540045629,0.558350568994769,0,0.0974370051611986,0,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,2.78620756819187,2.88751792667834,0.118306800039844,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0.548751427043128,0,0,0.370353780634118,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.567100388969546,0.53735113621709,1.74380363108377,0.383382679165211,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.604780586659361,0.992431231275107,0.460385919864187,0,0,1.53512174720011,0.321707842287215,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0,0.576570202095319,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,1.13841952129715,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,3.36968812325356,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0.455173793141999,0,0,0,0,0,1.77148277162768,0.482385754501632,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0,0,0.126621591911757,0.195551382734803,0,0,0,0.288180834308212,0.458146384663663,0,0.14405479798815,0.124252535565433,0.471388069233591,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0.236417121897595,0,0.105600336519406,5.1993328406525,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0.879313402068495,0,0.517131825446202,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,4.89616023032527,3.7603484103405,10.1094040331942,7.86894313703531,0,0.886068179966986,0.244052529803926,0.250381861413,0,0,0.0620964029413835,0.138348634936231,0,1.66814029295813,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,1.72519698234691,0.157265941855896,0.109209638192014,0.169732529954025,0.212574920101683,1.48722917110803,2.79322458986622,0,0,1.60114149657094,0,0,0.449604575675217,0,0,0.41023272848151,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.126831620387814,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0.460409414939944,0,0.111231401892069,0.078493092850514,0.471346769748006,0,0,0.431855182437243,0.9555033757741,0,0,0,0,0,0.62164849248911,4.60939888153665,1.38251932362818,0,0,0.255640214277473,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,1.07185652062471,2.48750831837634,0.103432995861895,0.426467963801962,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,1.14755528628282,0,0.162806537221949,0,0,0.359300808426348,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=3.99692434395225,2.78330681058278,2.67813367782345,7.00513088471913,1.78784437770915,0.872338524100369,2.53299878168311,0.631719873426831,0.522371256399677,0.491467873003018,0,0.218441372130172,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.283604451492204,0,0.351339142772504,0.392937226493138,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0.312160076830321,0,0.597794722207204,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.619954687054593,0,0.247266929278557,0.910161361938026,0,0,0.375355559615893,0.554128230968366,0,0,0.150238058906597,0,0.179389635688862,0,0.635795703478686,0.900273288253207,0.309157587715317,0.257640540045629,0.558350568994769,0,0.0974370051611986,0,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,2.78620756819187,2.88751792667834,0.118306800039844,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0.548751427043128,0,0,0.370353780634118,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.567100388969546,0.53735113621709,1.74380363108377,0.383382679165211,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.604780586659361,0.992431231275107,0.460385919864187,0,0,1.53512174720011,0.321707842287215,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0,0.576570202095319,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,1.13841952129715,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,3.36968812325356,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0.455173793141999,0,0,0,0,0,1.77148277162768,0.482385754501632,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0,0,0.126621591911757,0.195551382734803,0,0,0,0.288180834308212,0.458146384663663,0,0.14405479798815,0.124252535565433,0.471388069233591,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0.236417121897595,0,0.105600336519406,5.1993328406525,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0.879313402068495,0,0.517131825446202,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,4.89616023032527,3.7603484103405,10.1094040331942,7.86894313703531,0,0.886068179966986,0.244052529803926,0.250381861413,0,0,0.0620964029413835,0.138348634936231,0,1.66814029295813,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,1.72519698234691,0.157265941855896,0.109209638192014,0.169732529954025,0.212574920101683,1.48722917110803,2.79322458986622,0,0,1.60114149657094,0,0,0.449604575675217,0,0,0.41023272848151,0,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.126831620387814,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0.460409414939944,0,0.111231401892069,0.078493092850514,0.471346769748006,0,0,0.431855182437243,0.9555033757741,0,0,0,0,0,0.62164849248911,4.60939888153665,1.38251932362818,0,0,0.255640214277473,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,1.07185652062471,2.48750831837634,0.103432995861895,0.426467963801962,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,1.14755528628282,0,0.162806537221949,0,0,0.359300808426348,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr13:110434090..110434101,- | |short_description=p@chr13:110434090..110434101,- | ||
}} | }} |
Latest revision as of 14:27, 24 July 2015
Short description: | p@chr13:110434090..110434101, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110434090..110434101, - |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.92e-44 | 15 |
adipocyte of omentum tissue | 3.87e-21 | 3 |
adipocyte of breast | 9.10e-15 | 2 |
outer root sheath cell | 1.04e-14 | 2 |
acinar cell of salivary gland | 6.57e-10 | 3 |
lung fibroblast | 7.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.18e-18 | 6 |
peritoneum | 3.18e-18 | 6 |
abdominal cavity | 3.18e-18 | 6 |
visceral peritoneum | 3.18e-18 | 6 |
hair root sheath | 1.04e-14 | 2 |
hair outer root sheath | 1.04e-14 | 2 |
bulb of hair follicle | 1.04e-14 | 2 |
cavity lining | 3.42e-09 | 12 |
serous membrane | 3.42e-09 | 12 |