FFCP PHASE1:Hg19::chr21:45773492..45773512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7226 | |EntrezGene=7226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12339 | |HGNC=12339 | ||
|TSSclassifier=strong | |||
|UniProt=O94759,Q5KTC1,Q14DR2 | |UniProt=O94759,Q5KTC1,Q14DR2 | ||
|association_with_transcript=8bp_to_NM_003307,NR_038257,uc002zew.1,uc010gpt.1_5end | |association_with_transcript=8bp_to_NM_003307,NR_038257,uc002zew.1,uc010gpt.1_5end | ||
|cluster_id=chr21:45773492..45773512,+ | |||
|coexpression_cluster_id=C4081 | |coexpression_cluster_id=C4081 | ||
|description=CAGE_peak_1_at_TRPM2_5end | |description=CAGE_peak_1_at_TRPM2_5end | ||
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|ontology_enrichment_celltype=CL:0000037!8.95e-54!172;CL:0000566!8.95e-54!172;CL:0002032!4.23e-49!165;CL:0000837!4.23e-49!165;CL:0000988!8.65e-48!182;CL:0000738!1.04e-46!140;CL:0000763!1.63e-45!112;CL:0000049!1.63e-45!112;CL:0000766!5.31e-43!76;CL:0002087!5.39e-40!119;CL:0000557!8.95e-40!71;CL:0002009!1.61e-39!65;CL:0002031!3.56e-39!124;CL:0002194!2.63e-38!63;CL:0000576!2.63e-38!63;CL:0000040!2.63e-38!63;CL:0000559!2.63e-38!63;CL:0000839!1.47e-37!70;CL:0002057!6.67e-32!42;CL:0000860!2.16e-28!45 | |ontology_enrichment_celltype=CL:0000037!8.95e-54!172;CL:0000566!8.95e-54!172;CL:0002032!4.23e-49!165;CL:0000837!4.23e-49!165;CL:0000988!8.65e-48!182;CL:0000738!1.04e-46!140;CL:0000763!1.63e-45!112;CL:0000049!1.63e-45!112;CL:0000766!5.31e-43!76;CL:0002087!5.39e-40!119;CL:0000557!8.95e-40!71;CL:0002009!1.61e-39!65;CL:0002031!3.56e-39!124;CL:0002194!2.63e-38!63;CL:0000576!2.63e-38!63;CL:0000040!2.63e-38!63;CL:0000559!2.63e-38!63;CL:0000839!1.47e-37!70;CL:0002057!6.67e-32!42;CL:0000860!2.16e-28!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.30e-29;39!CL:0000234;4.30e-29;39!CL:0000860;2.42e-28;33!CL:0002057;2.42e-28;33!CL:0000576;2.49e-27;48!CL:0000766;1.42e-21;69!CL:0000763;8.84e-17;100!CL:0002087;6.53e-11;104!CL:0000738;6.73e-11;136!CL:0000988;3.66e-09;177!CL:0000235;8.02e-08;6!CL:0000094;2.78e-07;8 | |ontology_enrichment_celltype_v019=CL:0000473;4.30e-29;39!CL:0000234;4.30e-29;39!CL:0000860;2.42e-28;33!CL:0002057;2.42e-28;33!CL:0000576;2.49e-27;48!CL:0000766;1.42e-21;69!CL:0000763;8.84e-17;100!CL:0002087;6.53e-11;104!CL:0000738;6.73e-11;136!CL:0000988;3.66e-09;177!CL:0000235;8.02e-08;6!CL:0000094;2.78e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.11e-54,108;CL:0000049,1.11e-54,108;CL:0000766,1.18e-53,72;CL:0000037,1.25e-52,168;CL:0002009,7.18e-52,61;CL:0002194,1.89e-50,59;CL:0000576,1.89e-50,59;CL:0000040,1.89e-50,59;CL:0000559,1.89e-50,59;CL:0000557,7.78e-50,67;CL:0000988,9.61e-48,177;CL:0002032,1.85e-47,161;CL:0000837,1.85e-47,161;CL:0000738,1.57e-45,136;CL:0000839,4.58e-45,66;CL:0000473,8.73e-44,48;CL:0000234,8.73e-44,48;CL:0002087,6.76e-39,115;CL:0000860,2.73e-37,42;CL:0002057,2.73e-37,42;CL:0002031,2.05e-35,120;CL:0000235,7.96e-08,6;CL:0002393,1.43e-07,9;CL:0002397,1.43e-07,9;CL:0000094,2.47e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.19e-27;42!CL:0000049;6.32e-16;108 | |ontology_enrichment_development_v019=CL:0002057;6.19e-27;42!CL:0000049;6.32e-16;108 | ||
|ontology_enrichment_disease=DOID:1240!4.05e-09!39;DOID:2531!3.37e-07!51;DOID:0060083!3.37e-07!51;DOID:8692!9.81e-07!31 | |ontology_enrichment_disease=DOID:1240!4.05e-09!39;DOID:2531!3.37e-07!51;DOID:0060083!3.37e-07!51;DOID:8692!9.81e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.75e-08;39!DOID:8692;1.29e-07;31 | |ontology_enrichment_disease_v019=DOID:1240;1.75e-08;39!DOID:8692;1.29e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,3.65e-10,39;DOID:8692,6.57e-08,31;DOID:2531,4.61e-07,51;DOID:0060083,4.61e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-44!115;UBERON:0002390!1.65e-41!102;UBERON:0003061!1.65e-41!102;UBERON:0002193!6.68e-37!112;UBERON:0002371!3.75e-34!80;UBERON:0001474!1.06e-29!86;UBERON:0002405!1.89e-25!115;UBERON:0004765!1.53e-22!101;UBERON:0001434!1.53e-22!101;UBERON:0001049!6.34e-16!57;UBERON:0005068!6.34e-16!57;UBERON:0006241!6.34e-16!57;UBERON:0007135!6.34e-16!57;UBERON:0003080!1.16e-12!42;UBERON:0002780!2.83e-12!41;UBERON:0001890!2.83e-12!41;UBERON:0006240!2.83e-12!41;UBERON:0002616!4.53e-12!59;UBERON:0003081!2.61e-10!216;UBERON:0002020!8.48e-10!34;UBERON:0003528!8.48e-10!34;UBERON:0001893!1.37e-09!34;UBERON:0002791!2.45e-09!33;UBERON:0003075!2.64e-09!86;UBERON:0007284!2.64e-09!86;UBERON:0001017!3.07e-09!82;UBERON:0000955!3.75e-09!69;UBERON:0006238!3.75e-09!69;UBERON:0005743!9.87e-09!86;UBERON:0001869!1.53e-08!32;UBERON:0002346!3.26e-08!90;UBERON:0002619!2.23e-07!22;UBERON:0000073!5.85e-07!94;UBERON:0001016!5.85e-07!94;UBERON:0002204!8.93e-07!167 | |ontology_enrichment_uberon=UBERON:0007023!2.22e-44!115;UBERON:0002390!1.65e-41!102;UBERON:0003061!1.65e-41!102;UBERON:0002193!6.68e-37!112;UBERON:0002371!3.75e-34!80;UBERON:0001474!1.06e-29!86;UBERON:0002405!1.89e-25!115;UBERON:0004765!1.53e-22!101;UBERON:0001434!1.53e-22!101;UBERON:0001049!6.34e-16!57;UBERON:0005068!6.34e-16!57;UBERON:0006241!6.34e-16!57;UBERON:0007135!6.34e-16!57;UBERON:0003080!1.16e-12!42;UBERON:0002780!2.83e-12!41;UBERON:0001890!2.83e-12!41;UBERON:0006240!2.83e-12!41;UBERON:0002616!4.53e-12!59;UBERON:0003081!2.61e-10!216;UBERON:0002020!8.48e-10!34;UBERON:0003528!8.48e-10!34;UBERON:0001893!1.37e-09!34;UBERON:0002791!2.45e-09!33;UBERON:0003075!2.64e-09!86;UBERON:0007284!2.64e-09!86;UBERON:0001017!3.07e-09!82;UBERON:0000955!3.75e-09!69;UBERON:0006238!3.75e-09!69;UBERON:0005743!9.87e-09!86;UBERON:0001869!1.53e-08!32;UBERON:0002346!3.26e-08!90;UBERON:0002619!2.23e-07!22;UBERON:0000073!5.85e-07!94;UBERON:0001016!5.85e-07!94;UBERON:0002204!8.93e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.15e-10;114!UBERON:0002780;4.74e-09;41!UBERON:0001890;4.74e-09;41!UBERON:0000073;3.14e-08;53!UBERON:0002616;3.14e-08;53!UBERON:0001893;3.89e-08;34!UBERON:0003528;6.45e-08;34!UBERON:0002020;6.45e-08;34!UBERON:0002791;1.73e-07;32!UBERON:0001869;3.28e-07;32!UBERON:0000125;8.14e-07;9!UBERON:0002308;8.14e-07;9!UBERON:0002420;9.76e-07;9!UBERON:0007245;9.76e-07;9!UBERON:0010009;9.76e-07;9!UBERON:0010011;9.76e-07;9!UBERON:0000454;9.76e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0007023;2.15e-10;114!UBERON:0002780;4.74e-09;41!UBERON:0001890;4.74e-09;41!UBERON:0000073;3.14e-08;53!UBERON:0002616;3.14e-08;53!UBERON:0001893;3.89e-08;34!UBERON:0003528;6.45e-08;34!UBERON:0002020;6.45e-08;34!UBERON:0002791;1.73e-07;32!UBERON:0001869;3.28e-07;32!UBERON:0000125;8.14e-07;9!UBERON:0002308;8.14e-07;9!UBERON:0002420;9.76e-07;9!UBERON:0007245;9.76e-07;9!UBERON:0010009;9.76e-07;9!UBERON:0010011;9.76e-07;9!UBERON:0000454;9.76e-07;9 | ||
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| ||
|short_description=p1@TRPM2 | |short_description=p1@TRPM2 | ||
}} | }} |
Latest revision as of 18:51, 18 September 2015
Short description: | p1@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRPM2_5end |
Coexpression cluster: | C4081_granulocyte_Monocytederived_acute_Macrophage_CD14_Dendritic_biphenotypic |
Association with transcript: | 8bp_to_NM_003307, NR_038257, uc002zew.1, uc010gpt.1_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | O94759Q5KTC1Q14DR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.11e-54 | 108 |
common myeloid progenitor | 1.11e-54 | 108 |
myeloid leukocyte | 1.18e-53 | 72 |
hematopoietic stem cell | 1.25e-52 | 168 |
macrophage dendritic cell progenitor | 7.18e-52 | 61 |
monopoietic cell | 1.89e-50 | 59 |
monocyte | 1.89e-50 | 59 |
monoblast | 1.89e-50 | 59 |
promonocyte | 1.89e-50 | 59 |
granulocyte monocyte progenitor cell | 7.78e-50 | 67 |
hematopoietic cell | 9.61e-48 | 177 |
hematopoietic oligopotent progenitor cell | 1.85e-47 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-47 | 161 |
leukocyte | 1.57e-45 | 136 |
myeloid lineage restricted progenitor cell | 4.58e-45 | 66 |
defensive cell | 8.73e-44 | 48 |
phagocyte | 8.73e-44 | 48 |
nongranular leukocyte | 6.76e-39 | 115 |
classical monocyte | 2.73e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.73e-37 | 42 |
hematopoietic lineage restricted progenitor cell | 2.05e-35 | 120 |
macrophage | 7.96e-08 | 6 |
intermediate monocyte | 1.43e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.43e-07 | 9 |
granulocyte | 2.47e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.65e-10 | 39 |
myeloid leukemia | 6.57e-08 | 31 |
hematologic cancer | 4.61e-07 | 51 |
immune system cancer | 4.61e-07 | 51 |