FFCP PHASE1:Hg19::chr12:12510212..12510225,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118426 | |EntrezGene=118426 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17950 | |HGNC=17950 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENST00000543990_5end | |association_with_transcript=-66bp_to_ENST00000543990_5end | ||
|cluster_id=chr12:12510212..12510225,+ | |||
|coexpression_cluster_id=C123 | |coexpression_cluster_id=C123 | ||
|description=CAGE_peak_6_at_LOH12CR1_5end | |description=CAGE_peak_6_at_LOH12CR1_5end | ||
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|ontology_enrichment_celltype=CL:0000738!3.94e-47!140;CL:0000037!4.10e-39!172;CL:0000566!4.10e-39!172;CL:0000988!4.44e-38!182;CL:0002032!9.65e-36!165;CL:0000837!9.65e-36!165;CL:0002087!2.82e-35!119;CL:0002031!2.11e-34!124;CL:0000766!1.66e-26!76;CL:0002057!2.53e-24!42;CL:0000860!3.52e-23!45;CL:0000557!8.92e-23!71;CL:0000763!5.77e-21!112;CL:0000049!5.77e-21!112;CL:0002009!2.81e-20!65;CL:0000839!1.18e-19!70;CL:0002194!4.21e-19!63;CL:0000576!4.21e-19!63;CL:0000040!4.21e-19!63;CL:0000559!4.21e-19!63;CL:0000542!1.11e-13!53;CL:0000051!1.11e-13!53;CL:0000838!3.67e-13!52;CL:0000945!9.00e-09!24;CL:0000826!9.00e-09!24;CL:0000451!5.85e-08!10;CL:0000094!1.20e-07!8;CL:0002393!3.09e-07!9;CL:0002397!3.09e-07!9 | |ontology_enrichment_celltype=CL:0000738!3.94e-47!140;CL:0000037!4.10e-39!172;CL:0000566!4.10e-39!172;CL:0000988!4.44e-38!182;CL:0002032!9.65e-36!165;CL:0000837!9.65e-36!165;CL:0002087!2.82e-35!119;CL:0002031!2.11e-34!124;CL:0000766!1.66e-26!76;CL:0002057!2.53e-24!42;CL:0000860!3.52e-23!45;CL:0000557!8.92e-23!71;CL:0000763!5.77e-21!112;CL:0000049!5.77e-21!112;CL:0002009!2.81e-20!65;CL:0000839!1.18e-19!70;CL:0002194!4.21e-19!63;CL:0000576!4.21e-19!63;CL:0000040!4.21e-19!63;CL:0000559!4.21e-19!63;CL:0000542!1.11e-13!53;CL:0000051!1.11e-13!53;CL:0000838!3.67e-13!52;CL:0000945!9.00e-09!24;CL:0000826!9.00e-09!24;CL:0000451!5.85e-08!10;CL:0000094!1.20e-07!8;CL:0002393!3.09e-07!9;CL:0002397!3.09e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000094;8.72e-19;8!CL:0000081;1.71e-16;11!CL:0000624;4.15e-16;6!CL:0000860;1.31e-12;33!CL:0002057;1.31e-12;33!CL:0002087;1.81e-12;104!CL:0000766;8.58e-12;69!CL:0000791;1.32e-10;18!CL:0000789;1.32e-10;18!CL:0002419;1.32e-10;18!CL:0000738;2.43e-10;136!CL:0000576;7.81e-10;48!CL:0002393;9.36e-10;6!CL:0002397;9.36e-10;6!CL:0000542;6.28e-09;53!CL:0000898;8.36e-09;3!CL:0000623;8.46e-09;3!CL:0000226;9.13e-09;3!CL:0000842;9.13e-09;3!CL:0000775;9.49e-09;3!CL:0000473;1.29e-08;39!CL:0000234;1.29e-08;39!CL:0000784;1.06e-07;3!CL:0000767;1.89e-07;3!CL:0000084;4.41e-07;25!CL:0000451;5.59e-07;10 | |ontology_enrichment_celltype_v019=CL:0000094;8.72e-19;8!CL:0000081;1.71e-16;11!CL:0000624;4.15e-16;6!CL:0000860;1.31e-12;33!CL:0002057;1.31e-12;33!CL:0002087;1.81e-12;104!CL:0000766;8.58e-12;69!CL:0000791;1.32e-10;18!CL:0000789;1.32e-10;18!CL:0002419;1.32e-10;18!CL:0000738;2.43e-10;136!CL:0000576;7.81e-10;48!CL:0002393;9.36e-10;6!CL:0002397;9.36e-10;6!CL:0000542;6.28e-09;53!CL:0000898;8.36e-09;3!CL:0000623;8.46e-09;3!CL:0000226;9.13e-09;3!CL:0000842;9.13e-09;3!CL:0000775;9.49e-09;3!CL:0000473;1.29e-08;39!CL:0000234;1.29e-08;39!CL:0000784;1.06e-07;3!CL:0000767;1.89e-07;3!CL:0000084;4.41e-07;25!CL:0000451;5.59e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.32e-50,136;CL:0000037,1.36e-39,168;CL:0000988,3.19e-38,177;CL:0002032,1.36e-33,161;CL:0000837,1.36e-33,161;CL:0002087,1.55e-33,115;CL:0002031,1.70e-29,120;CL:0000766,2.97e-27,72;CL:0000860,3.04e-20,42;CL:0002057,3.04e-20,42;CL:0000094,3.72e-19,8;CL:0000763,7.08e-19,108;CL:0000049,7.08e-19,108;CL:0000557,2.00e-18,67;CL:0000473,5.65e-17,48;CL:0000234,5.65e-17,48;CL:0000081,9.83e-17,11;CL:0002009,3.76e-16,61;CL:0000624,4.14e-16,6;CL:0000839,1.15e-15,66;CL:0002194,2.56e-15,59;CL:0000576,2.56e-15,59;CL:0000040,2.56e-15,59;CL:0000559,2.56e-15,59;CL:0000542,6.08e-14,53;CL:0000051,6.08e-14,53;CL:0000838,6.72e-13,52;CL:0000134,1.30e-10,354;CL:0000791,1.33e-10,18;CL:0000789,1.33e-10,18;CL:0002420,1.33e-10,18;CL:0002419,1.33e-10,18;CL:0000790,1.33e-10,18;CL:0002320,4.01e-10,361;CL:0002393,5.18e-09,9;CL:0002397,5.18e-09,9;CL:0000898,8.19e-09,3;CL:0000226,8.62e-09,3;CL:0000623,8.62e-09,3;CL:0000842,8.62e-09,3;CL:0000825,8.62e-09,3;CL:0000775,9.30e-09,3;CL:0000219,2.06e-08,386;CL:0000784,8.41e-08,3;CL:0000767,9.03e-08,3;CL:0000084,4.43e-07,25;CL:0000827,4.43e-07,25;CL:0000451,5.39e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.22e-14;42!CL:0000790;1.32e-10;18!CL:0000051;6.28e-09;53 | |ontology_enrichment_development_v019=CL:0002057;2.22e-14;42!CL:0000790;1.32e-10;18!CL:0000051;6.28e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.81e-25!102;UBERON:0003061!2.81e-25!102;UBERON:0002193!8.40e-23!112;UBERON:0002371!2.06e-19!80;UBERON:0001474!2.39e-18!86;UBERON:0002405!3.47e-14!115;UBERON:0004765!3.18e-13!101;UBERON:0001434!3.18e-13!101 | |ontology_enrichment_uberon=UBERON:0002390!2.81e-25!102;UBERON:0003061!2.81e-25!102;UBERON:0002193!8.40e-23!112;UBERON:0002371!2.06e-19!80;UBERON:0001474!2.39e-18!86;UBERON:0002405!3.47e-14!115;UBERON:0004765!3.18e-13!101;UBERON:0001434!3.18e-13!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.98e-20,98;UBERON:0003061,2.98e-20,98;UBERON:0002193,1.66e-17,108;UBERON:0002371,8.98e-17,76;UBERON:0001474,5.21e-15,82;UBERON:0002405,1.35e-13,93;UBERON:0004765,4.94e-13,90;UBERON:0001434,5.05e-11,100;UBERON:0002384,1.86e-09,371 | |||
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| ||
|short_description=p6@LOH12CR1 | |short_description=p6@LOH12CR1 | ||
}} | }} |
Latest revision as of 04:16, 17 September 2015
Short description: | p6@LOH12CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LOH12CR1_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | -66bp_to_ENST00000543990_5end |
EntrezGene: | LOH12CR1 |
HGNC: | 17950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.98e-20 | 98 |
blood island | 2.98e-20 | 98 |
hemolymphoid system | 1.66e-17 | 108 |
bone marrow | 8.98e-17 | 76 |
bone element | 5.21e-15 | 82 |
immune system | 1.35e-13 | 93 |
skeletal element | 4.94e-13 | 90 |
skeletal system | 5.05e-11 | 100 |
connective tissue | 1.86e-09 | 371 |