FFCP PHASE1:Hg19::chr20:48204950..48204954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48204950..48204954,- | |||
|description=CAGE_peak_at_chr20:48204950..48204954,- | |description=CAGE_peak_at_chr20:48204950..48204954,- | ||
|id=chr20:48204950..48204954,- | |id=chr20:48204950..48204954,- | ||
|ontology_enrichment_celltype=CL:0000359!8.64e-11!32;CL:0000192!1.12e-09!42;CL:0000514!1.12e-09!42;CL:0000569!5.11e-09!4;CL:0000011!5.11e-09!4 | |ontology_enrichment_celltype=CL:0000359!8.64e-11!32;CL:0000192!1.12e-09!42;CL:0000514!1.12e-09!42;CL:0000569!5.11e-09!4;CL:0000011!5.11e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.88e-17;32!CL:0000569;2.50e-14;4!CL:0002595;1.34e-11;5!CL:0000192;2.93e-11;43!CL:0002494;2.27e-09;16!CL:0002592;4.06e-09;3!CL:0000511;1.10e-07;1!CL:0002625;1.10e-07;1!CL:0000216;1.10e-07;1!CL:0002591;1.10e-07;1!CL:1000306;4.29e-07;4!CL:0002547;4.29e-07;4 | |ontology_enrichment_celltype_v019=CL:0000359;5.88e-17;32!CL:0000569;2.50e-14;4!CL:0002595;1.34e-11;5!CL:0000192;2.93e-11;43!CL:0002494;2.27e-09;16!CL:0002592;4.06e-09;3!CL:0000511;1.10e-07;1!CL:0002625;1.10e-07;1!CL:0000216;1.10e-07;1!CL:0002591;1.10e-07;1!CL:1000306;4.29e-07;4!CL:0002547;4.29e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.42e-17,32;CL:0000569,3.15e-14,4;CL:0000011,3.15e-14,4;CL:0000192,1.26e-12,43;CL:0000514,1.26e-12,43;CL:0002595,1.20e-11,5;CL:0000187,1.73e-09,55;CL:0002494,2.38e-09,16;CL:0002592,3.67e-09,3;CL:0000680,6.60e-09,58;CL:0000056,6.60e-09,58;CL:0000355,6.60e-09,58;CL:0000393,2.20e-08,61;CL:0000211,2.20e-08,61;CL:0002591,1.10e-07,1;CL:0000511,1.18e-07,1;CL:0002625,1.18e-07,1;CL:0000216,1.18e-07,1;CL:1000306,3.63e-07,4;CL:0002547,3.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.99e-14;4!UBERON:0007284;1.99e-14;4!CL:0000011;2.50e-14;4!CL:0000514;2.93e-11;43!UBERON:0000358;8.53e-08;1!UBERON:0003124;3.10e-07;1!UBERON:0003099;3.10e-07;1!UBERON:0003852;3.10e-07;1 | |ontology_enrichment_development_v019=UBERON:0005062;1.99e-14;4!UBERON:0007284;1.99e-14;4!CL:0000011;2.50e-14;4!CL:0000514;2.93e-11;43!UBERON:0000358;8.53e-08;1!UBERON:0003124;3.10e-07;1!UBERON:0003099;3.10e-07;1!UBERON:0003852;3.10e-07;1 | ||
|ontology_enrichment_disease=DOID:2394!8.02e-10!14 | |ontology_enrichment_disease=DOID:2394!8.02e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2513;3.10e-07;1 | |ontology_enrichment_disease_v019=DOID:2513;3.10e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,3.20e-07,1 | |||
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|short_description=p@chr20:48204950..48204954,- | |short_description=p@chr20:48204950..48204954,- | ||
}} | }} |
Latest revision as of 15:03, 28 July 2015
Short description: | p@chr20:48204950..48204954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48204950..48204954, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.42e-17 | 32 |
cardiac mesenchymal cell | 3.15e-14 | 4 |
migratory trunk neural crest cell | 3.15e-14 | 4 |
smooth muscle cell | 1.26e-12 | 43 |
smooth muscle myoblast | 1.26e-12 | 43 |
smooth muscle cell of the subclavian artery | 1.20e-11 | 5 |
muscle cell | 1.73e-09 | 55 |
cardiocyte | 2.38e-09 | 16 |
smooth muscle cell of the coronary artery | 3.67e-09 | 3 |
muscle precursor cell | 6.60e-09 | 58 |
myoblast | 6.60e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.60e-09 | 58 |
electrically responsive cell | 2.20e-08 | 61 |
electrically active cell | 2.20e-08 | 61 |
smooth muscle cell of the pulmonary artery | 1.10e-07 | 1 |
androgen binding protein secreting cell | 1.18e-07 | 1 |
seminiferous tubule epithelial cell | 1.18e-07 | 1 |
Sertoli cell | 1.18e-07 | 1 |
fibroblast of tunica adventitia of artery | 3.63e-07 | 4 |
fibroblast of the aortic adventitia | 3.63e-07 | 4 |
Ontology term | p-value | n |
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