FFCP PHASE1:Hg19::chr1:207064145..207064159,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207064145..207064159,- | |||
|description=CAGE_peak_at_chr1:207064145..207064159,- | |description=CAGE_peak_at_chr1:207064145..207064159,- | ||
|id=chr1:207064145..207064159,- | |id=chr1:207064145..207064159,- | ||
|ontology_enrichment_celltype=CL:0000860!9.30e-26!45;CL:0002057!3.02e-24!42;CL:0002194!1.96e-15!63;CL:0000576!1.96e-15!63;CL:0000040!1.96e-15!63;CL:0000559!1.96e-15!63;CL:0002009!1.31e-14!65;CL:0000839!1.85e-14!70;CL:0000557!4.33e-14!71;CL:0000766!2.50e-13!76 | |ontology_enrichment_celltype=CL:0000860!9.30e-26!45;CL:0002057!3.02e-24!42;CL:0002194!1.96e-15!63;CL:0000576!1.96e-15!63;CL:0000040!1.96e-15!63;CL:0000559!1.96e-15!63;CL:0002009!1.31e-14!65;CL:0000839!1.85e-14!70;CL:0000557!4.33e-14!71;CL:0000766!2.50e-13!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.41e-37;33!CL:0002057;4.41e-37;33!CL:0000473;8.92e-25;39!CL:0000234;8.92e-25;39!CL:0000576;1.38e-18;48!CL:0002567;6.96e-11;3!CL:0000766;6.09e-09;69!CL:0002195;3.14e-08;2!CL:0002571;3.14e-08;2 | |ontology_enrichment_celltype_v019=CL:0000860;4.41e-37;33!CL:0002057;4.41e-37;33!CL:0000473;8.92e-25;39!CL:0000234;8.92e-25;39!CL:0000576;1.38e-18;48!CL:0002567;6.96e-11;3!CL:0000766;6.09e-09;69!CL:0002195;3.14e-08;2!CL:0002571;3.14e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.42e-34,42;CL:0002057,4.42e-34,42;CL:0000473,4.42e-29,48;CL:0000234,4.42e-29,48;CL:0002194,4.28e-22,59;CL:0000576,4.28e-22,59;CL:0000040,4.28e-22,59;CL:0000559,4.28e-22,59;CL:0002009,3.39e-21,61;CL:0000839,3.48e-19,66;CL:0000557,8.09e-19,67;CL:0000766,3.86e-17,72;CL:0002567,6.97e-11,3;CL:0000763,1.12e-09,108;CL:0000049,1.12e-09,108;CL:0002087,8.83e-09,115;CL:0002031,3.31e-08,120;CL:0002195,3.44e-08,2;CL:0002571,3.44e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-23;42 | |ontology_enrichment_development_v019=CL:0002057;1.74e-23;42 | ||
|ontology_enrichment_disease=DOID:2394!6.95e-12!14 | |ontology_enrichment_disease=DOID:2394!6.95e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.26e-11;14!DOID:1749;1.19e-10;14!DOID:120;8.36e-07;27 | |ontology_enrichment_disease_v019=DOID:2394;5.26e-11;14!DOID:1749;1.19e-10;14!DOID:120;8.36e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.79e-11,14;DOID:1749,1.21e-10,14;DOID:120,8.85e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.66e-14!80;UBERON:0001474!3.87e-12!86;UBERON:0002390!4.47e-12!102;UBERON:0003061!4.47e-12!102;UBERON:0002405!1.95e-11!115;UBERON:0004765!9.82e-11!101;UBERON:0001434!9.82e-11!101;UBERON:0002193!2.30e-10!112;UBERON:0000992!1.30e-08!13;UBERON:0002118!2.35e-07!5;UBERON:0004532!2.35e-07!5 | |ontology_enrichment_uberon=UBERON:0002371!5.66e-14!80;UBERON:0001474!3.87e-12!86;UBERON:0002390!4.47e-12!102;UBERON:0003061!4.47e-12!102;UBERON:0002405!1.95e-11!115;UBERON:0004765!9.82e-11!101;UBERON:0001434!9.82e-11!101;UBERON:0002193!2.30e-10!112;UBERON:0000992!1.30e-08!13;UBERON:0002118!2.35e-07!5;UBERON:0004532!2.35e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;2.61e-11;5!UBERON:0002346;7.13e-08;4!UBERON:0000923;7.13e-08;4!UBERON:0010316;7.13e-08;4!UBERON:0005291;7.13e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0002118;2.61e-11;5!UBERON:0002346;7.13e-08;4!UBERON:0000923;7.13e-08;4!UBERON:0010316;7.13e-08;4!UBERON:0005291;7.13e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-17,76;UBERON:0001474,5.57e-16,82;UBERON:0004765,1.68e-15,90;UBERON:0002405,1.98e-13,93;UBERON:0001434,2.28e-13,100;UBERON:0002390,1.84e-12,98;UBERON:0003061,1.84e-12,98;UBERON:0002118,2.62e-11,5;UBERON:0002193,8.41e-11,108;UBERON:0002204,3.38e-07,167 | |||
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| ||
|short_description=p@chr1:207064145..207064159,- | |short_description=p@chr1:207064145..207064159,- | ||
}} | }} |
Latest revision as of 02:59, 28 July 2015
Short description: | p@chr1:207064145..207064159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207064145..207064159, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.42e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.42e-34 | 42 |
defensive cell | 4.42e-29 | 48 |
phagocyte | 4.42e-29 | 48 |
monopoietic cell | 4.28e-22 | 59 |
monocyte | 4.28e-22 | 59 |
monoblast | 4.28e-22 | 59 |
promonocyte | 4.28e-22 | 59 |
macrophage dendritic cell progenitor | 3.39e-21 | 61 |
myeloid lineage restricted progenitor cell | 3.48e-19 | 66 |
granulocyte monocyte progenitor cell | 8.09e-19 | 67 |
myeloid leukocyte | 3.86e-17 | 72 |
light melanocyte | 6.97e-11 | 3 |
myeloid cell | 1.12e-09 | 108 |
common myeloid progenitor | 1.12e-09 | 108 |
nongranular leukocyte | 8.83e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 3.31e-08 | 120 |
hepatic stem cell | 3.44e-08 | 2 |
hepatic mesenchymal stem cell | 3.44e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-17 | 76 |
bone element | 5.57e-16 | 82 |
skeletal element | 1.68e-15 | 90 |
immune system | 1.98e-13 | 93 |
skeletal system | 2.28e-13 | 100 |
hematopoietic system | 1.84e-12 | 98 |
blood island | 1.84e-12 | 98 |
right ovary | 2.62e-11 | 5 |
hemolymphoid system | 8.41e-11 | 108 |
musculoskeletal system | 3.38e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.79e-11 | 14 |
squamous cell carcinoma | 1.21e-10 | 14 |
female reproductive organ cancer | 8.85e-07 | 27 |