FFCP PHASE1:Hg19::chr12:7170229..7170249,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=716 | |EntrezGene=716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1247 | |HGNC=1247 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK025309_5end | |association_with_transcript=0bp_to_AK025309_5end | ||
|cluster_id=chr12:7170229..7170249,+ | |||
|coexpression_cluster_id=C424 | |coexpression_cluster_id=C424 | ||
|description=CAGE_peak_10_at_C1S_5end | |description=CAGE_peak_10_at_C1S_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!3.40e-09!15;CL:0000055!3.38e-08!180;CL:0000057!2.31e-07!75 | |ontology_enrichment_celltype=CL:0000136!3.40e-09!15;CL:0000055!3.38e-08!180;CL:0000057!2.31e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002615;5.94e-12;3!CL:0000136;6.72e-10;13!CL:0002593;1.20e-08;2!CL:0002617;2.68e-08;2!CL:0000499;9.93e-08;28!CL:0000153;2.18e-07;9!CL:0000447;2.18e-07;9 | |ontology_enrichment_celltype_v019=CL:0002615;5.94e-12;3!CL:0000136;6.72e-10;13!CL:0002593;1.20e-08;2!CL:0002617;2.68e-08;2!CL:0000499;9.93e-08;28!CL:0000153;2.18e-07;9!CL:0000447;2.18e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002615,5.97e-12,3;CL:0000136,2.32e-11,15;CL:0002593,1.99e-08,2;CL:0002617,3.25e-08,2;CL:0000499,9.48e-08,28;CL:0000153,2.04e-07,9;CL:0000447,2.04e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004458!9.08e-10!49;UBERON:0004457!6.64e-09!12;UBERON:0000042!6.64e-09!12;UBERON:0002323!1.06e-08!46;UBERON:0002100!8.19e-08!216;UBERON:0003688!1.26e-07!6;UBERON:0002358!1.26e-07!6;UBERON:0003684!1.26e-07!6;UBERON:0001178!1.26e-07!6;UBERON:0005256!9.24e-07!143 | |ontology_enrichment_uberon=UBERON:0004458!9.08e-10!49;UBERON:0004457!6.64e-09!12;UBERON:0000042!6.64e-09!12;UBERON:0002323!1.06e-08!46;UBERON:0002100!8.19e-08!216;UBERON:0003688!1.26e-07!6;UBERON:0002358!1.26e-07!6;UBERON:0003684!1.26e-07!6;UBERON:0001178!1.26e-07!6;UBERON:0005256!9.24e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.98e-15;9!UBERON:0000042;3.98e-15;9!UBERON:0003688;2.01e-10;6!UBERON:0002358;2.01e-10;6!UBERON:0003684;2.01e-10;6!UBERON:0001178;2.01e-10;6!UBERON:0002456;1.20e-08;2!UBERON:0003101;1.33e-07;22!UBERON:0000079;1.33e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0004457;3.98e-15;9!UBERON:0000042;3.98e-15;9!UBERON:0003688;2.01e-10;6!UBERON:0002358;2.01e-10;6!UBERON:0003684;2.01e-10;6!UBERON:0001178;2.01e-10;6!UBERON:0002456;1.20e-08;2!UBERON:0003101;1.33e-07;22!UBERON:0000079;1.33e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,8.37e-15,12;UBERON:0000042,8.37e-15,12;UBERON:0003688,2.40e-10,6;UBERON:0002358,2.40e-10,6;UBERON:0003684,2.40e-10,6;UBERON:0001178,2.40e-10,6;UBERON:0002456,1.99e-08,2;UBERON:0003101,9.23e-08,22;UBERON:0000079,9.23e-08,22;UBERON:0004458,3.05e-07,49;UBERON:0002417,7.97e-07,60;UBERON:0000916,7.97e-07,60 | |||
|phase1_expression=1.45342703416445,1.07050261945492,1.55049844505568,1.0007329835313,2.68176656656373,0.872338524100369,0,0.631719873426831,2.35067065379855,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,0.50133791063589,2.31754430337318,0.795285947051099,3.89307896242109,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.397227542439656,1.14734648299525,0,0.560677600142307,0,0,0.311211035399766,0,0,0.605429710579726,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,4.75201142912821,2.47266929278557,0,0,0,0,0,0,0,1.50238058906597,0,0,0.213557388818567,0.635795703478686,0,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0.389748020644795,0.757301322732344,0.644349290496095,1.77810662500693,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,1.2347220339942,0,7.60530208930985,12.7767538168091,8.27105869353966,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.904318131178758,1.74306691720059,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.892144943985809,0,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.896974044789907,2.04682899626681,0.804269605718038,0,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0.68888668898764,0.728364672026868,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,5.25509159403384,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0.214840489736547,0.290033387828457,0,0.534192213880424,0,0,0,0.10115778085555,0,0.31481234683064,0,2.15623506123262,0,0,0,0.143124886741991,0,0,0.38126038784765,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,2.19342140668156,1.05650146756755,0,1.41405431953713,2.26016233240486,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,3.16661452946496,2.30506425071931,0,0,0,0,0,5.08376524194607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0.179021174675609,0,0.887790650732402,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.00035336054936,0.797594390929008,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,2.79562669187248,0,0,0,0,1.55182426381471,0,0.225980740780532,0,0,0,0,0.0801588202515337,1.06726497369676,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,2.1440859791201,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,18.7586859107946,0,0,0,0,0,0.747511887973863,0.157204305099666,0,1.48849806543585,0,0,0.638341257770182,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0.470531639396343,0,0,0.298509605773748,0.467426619694449,0,0,0.50313580350515,0.889811221596536,0.228840068396924,0.453692771289717,0,0.147855149989634,0,0.899606224327209,0.155262956876259,0.829412415681711,0.265841714557995,0.521745061811734,0.150257608997218,0,0.406870733204662,0.363697318405119,0.214821114084977,0.464033759878494,0.398095888698616,0,0.343395705182793,1.34699795506368,0,0,0.643324774124777,0,0,0.231522474323834,0.489473409012935,0,0,1.31570429747224,0,0,1.18259708457151,0,0,0.303859956177382,0,0,0,0,0.655219697692825,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,2.18109952212846,0,0.781514011233092,0,0,0,0,0,0.413373593002368,0,0,0,1.48863353516788,0,0,0,0.336283722218824,0,0,0.266107110487916,0,0.342976018874837,0.0679697329768317,0,0,0,1.88383422841234,0,0,0.913158720509496,0,0.47775168788705,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,0,0,1.12780701575824,0.322289439867886,0,0.178553938605658,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0.743990036333503,2.77305377178851,1.29787968637137,0,0,0,0,0,0,0,4.54672189309436,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0.129177819672012,0.0620747142958579,0,0.572824424503484,0,0.653150243690884,0,0,0.860666464712116,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.603821380773079,0 | |phase1_expression=1.45342703416445,1.07050261945492,1.55049844505568,1.0007329835313,2.68176656656373,0.872338524100369,0,0.631719873426831,2.35067065379855,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,0.50133791063589,2.31754430337318,0.795285947051099,3.89307896242109,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.397227542439656,1.14734648299525,0,0.560677600142307,0,0,0.311211035399766,0,0,0.605429710579726,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,4.75201142912821,2.47266929278557,0,0,0,0,0,0,0,1.50238058906597,0,0,0.213557388818567,0.635795703478686,0,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0.389748020644795,0.757301322732344,0.644349290496095,1.77810662500693,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,1.2347220339942,0,7.60530208930985,12.7767538168091,8.27105869353966,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.904318131178758,1.74306691720059,0.699810938274399,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.892144943985809,0,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.896974044789907,2.04682899626681,0.804269605718038,0,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0.68888668898764,0.728364672026868,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,5.25509159403384,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0,0.214840489736547,0.290033387828457,0,0.534192213880424,0,0,0,0.10115778085555,0,0.31481234683064,0,2.15623506123262,0,0,0,0.143124886741991,0,0,0.38126038784765,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,2.19342140668156,1.05650146756755,0,1.41405431953713,2.26016233240486,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,3.16661452946496,2.30506425071931,0,0,0,0,0,5.08376524194607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0.179021174675609,0,0.887790650732402,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.00035336054936,0.797594390929008,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,2.79562669187248,0,0,0,0,1.55182426381471,0,0.225980740780532,0,0,0,0,0.0801588202515337,1.06726497369676,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,2.1440859791201,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,18.7586859107946,0,0,0,0,0,0.747511887973863,0.157204305099666,0,1.48849806543585,0,0,0.638341257770182,0.544017803369474,0.5013797880454,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0.470531639396343,0,0,0.298509605773748,0.467426619694449,0,0,0.50313580350515,0.889811221596536,0.228840068396924,0.453692771289717,0,0.147855149989634,0,0.899606224327209,0.155262956876259,0.829412415681711,0.265841714557995,0.521745061811734,0.150257608997218,0,0.406870733204662,0.363697318405119,0.214821114084977,0.464033759878494,0.398095888698616,0,0.343395705182793,1.34699795506368,0,0,0.643324774124777,0,0,0.231522474323834,0.489473409012935,0,0,1.31570429747224,0,0,1.18259708457151,0,0,0.303859956177382,0,0,0,0,0.655219697692825,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,2.18109952212846,0,0.781514011233092,0,0,0,0,0,0.413373593002368,0,0,0,1.48863353516788,0,0,0,0.336283722218824,0,0,0.266107110487916,0,0.342976018874837,0.0679697329768317,0,0,0,1.88383422841234,0,0,0.913158720509496,0,0.47775168788705,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,0,0,1.12780701575824,0.322289439867886,0,0.178553938605658,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0.743990036333503,2.77305377178851,1.29787968637137,0,0,0,0,0,0,0,4.54672189309436,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0.129177819672012,0.0620747142958579,0,0.572824424503484,0,0.653150243690884,0,0,0.860666464712116,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.603821380773079,0 | ||
|short_description=p10@C1S | |short_description=p10@C1S | ||
}} | }} |
Latest revision as of 16:51, 24 September 2015
Short description: | p10@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_C1S_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 0bp_to_AK025309_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 5.97e-12 | 3 |
fat cell | 2.32e-11 | 15 |
smooth muscle cell of the internal thoracic artery | 1.99e-08 | 2 |
adipocyte of breast | 3.25e-08 | 2 |
stromal cell | 9.48e-08 | 28 |
GAG secreting cell | 2.04e-07 | 9 |
carbohydrate secreting cell | 2.04e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 8.37e-15 | 12 |
serous membrane | 8.37e-15 | 12 |
omentum | 2.40e-10 | 6 |
peritoneum | 2.40e-10 | 6 |
abdominal cavity | 2.40e-10 | 6 |
visceral peritoneum | 2.40e-10 | 6 |
internal thoracic artery | 1.99e-08 | 2 |
male organism | 9.23e-08 | 22 |
male reproductive system | 9.23e-08 | 22 |
body cavity or lining | 3.05e-07 | 49 |
abdominal segment of trunk | 7.97e-07 | 60 |
abdomen | 7.97e-07 | 60 |