FFCP PHASE1:Hg19::chr1:40723707..40723738,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:40723707..40723738,+
|short_description=p3@ZMPSTE24
|description=CAGE_peak_3_at_ZMPSTE24_5end
|association_with_transcript=0bp_to_NM_005857,uc001cfg.2_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10269 | |EntrezGene=10269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12877 | |HGNC=12877 | ||
|TSSclassifier=strong | |||
|UniProt=O75844 | |UniProt=O75844 | ||
|association_with_transcript=0bp_to_NM_005857,uc001cfg.2_5end | |||
|cluster_id=chr1:40723707..40723738,+ | |||
|description=CAGE_peak_3_at_ZMPSTE24_5end | |||
|id=chr1:40723707..40723738,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.87e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.78e-22!115;UBERON:0000468!3.16e-10!659;UBERON:0000475!1.62e-09!365;UBERON:0000467!5.43e-09!625;UBERON:0000480!8.05e-09!626;UBERON:0000914!4.26e-08!83;UBERON:0002329!4.26e-08!83;UBERON:0003077!4.26e-08!83;UBERON:0003059!4.26e-08!83;UBERON:0007282!4.26e-08!83;UBERON:0009618!4.26e-08!83;UBERON:0007285!4.26e-08!83;UBERON:0002616!6.14e-08!59;UBERON:0002385!8.24e-08!63;UBERON:0001015!8.24e-08!63;UBERON:0000383!8.24e-08!63;UBERON:0001049!1.10e-07!57;UBERON:0005068!1.10e-07!57;UBERON:0006241!1.10e-07!57;UBERON:0007135!1.10e-07!57;UBERON:0000153!1.43e-07!129;UBERON:0007811!1.43e-07!129;UBERON:0000033!1.45e-07!123;UBERON:0003075!1.64e-07!86;UBERON:0007284!1.64e-07!86;UBERON:0000481!2.31e-07!347;UBERON:0000955!3.37e-07!69;UBERON:0006238!3.37e-07!69;UBERON:0001134!4.86e-07!61;UBERON:0002036!4.86e-07!61;UBERON:0003082!4.86e-07!61;UBERON:0000477!5.88e-07!286;UBERON:0005743!7.29e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.51e-22,114;UBERON:0010314,2.71e-09,132;UBERON:0002385,2.03e-08,64;UBERON:0001015,2.03e-08,64;UBERON:0000383,2.03e-08,64;UBERON:0003075,9.63e-08,82;UBERON:0007284,9.63e-08,82;UBERON:0001134,1.50e-07,62;UBERON:0002036,1.50e-07,62;UBERON:0003082,1.50e-07,62;UBERON:0001049,2.82e-07,56;UBERON:0005068,2.82e-07,56;UBERON:0006241,2.82e-07,56;UBERON:0007135,2.82e-07,56;UBERON:0002346,4.19e-07,86;UBERON:0003077,5.53e-07,72;UBERON:0007285,5.53e-07,72;UBERON:0007524,5.93e-07,73;UBERON:0000955,6.95e-07,68;UBERON:0006238,6.95e-07,68;UBERON:0000923,8.04e-07,560;UBERON:0010316,8.04e-07,560;UBERON:0005291,8.04e-07,560;UBERON:0006598,8.04e-07,560;UBERON:0010317,8.04e-07,560;UBERON:0002532,8.04e-07,560 | |||
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| ||
|short_description=p3@ZMPSTE24 | |||
}} | }} |
Latest revision as of 00:58, 18 September 2015
Short description: | p3@ZMPSTE24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZMPSTE24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_005857, uc001cfg.2_5end |
EntrezGene: | ZMPSTE24 |
HGNC: | 12877 |
UniProt: | O75844 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.51e-22 | 114 |
structure with developmental contribution from neural crest | 2.71e-09 | 132 |
muscle tissue | 2.03e-08 | 64 |
musculature | 2.03e-08 | 64 |
musculature of body | 2.03e-08 | 64 |
neural plate | 9.63e-08 | 82 |
presumptive neural plate | 9.63e-08 | 82 |
skeletal muscle tissue | 1.50e-07 | 62 |
striated muscle tissue | 1.50e-07 | 62 |
myotome | 1.50e-07 | 62 |
neural tube | 2.82e-07 | 56 |
neural rod | 2.82e-07 | 56 |
future spinal cord | 2.82e-07 | 56 |
neural keel | 2.82e-07 | 56 |
neurectoderm | 4.19e-07 | 86 |
paraxial mesoderm | 5.53e-07 | 72 |
presumptive paraxial mesoderm | 5.53e-07 | 72 |
dense mesenchyme tissue | 5.93e-07 | 73 |
brain | 6.95e-07 | 68 |
future brain | 6.95e-07 | 68 |
germ layer | 8.04e-07 | 560 |
germ layer / neural crest | 8.04e-07 | 560 |
embryonic tissue | 8.04e-07 | 560 |
presumptive structure | 8.04e-07 | 560 |
germ layer / neural crest derived structure | 8.04e-07 | 560 |
epiblast (generic) | 8.04e-07 | 560 |