FFCP PHASE1:Hg19::chr15:80841630..80841633,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80841630..80841633,- | |||
|description=CAGE_peak_at_chr15:80841630..80841633,- | |description=CAGE_peak_at_chr15:80841630..80841633,- | ||
|id=chr15:80841630..80841633,- | |id=chr15:80841630..80841633,- | ||
|ontology_enrichment_celltype=CL:0000055!3.37e-23!180;CL:0000057!2.01e-20!75;CL:1000306!9.30e-10!4;CL:0002547!9.30e-10!4;CL:0002554!1.20e-09!2;CL:0002620!1.40e-09!23;CL:0000680!4.77e-09!57;CL:0000056!4.77e-09!57;CL:0000355!4.77e-09!57;CL:0000183!1.11e-08!59;CL:0000048!1.43e-08!430;CL:0000723!2.53e-08!436;CL:0000187!3.05e-08!54;CL:0000034!5.31e-08!444;CL:0000192!6.40e-08!42;CL:0000514!6.40e-08!42;CL:0000393!3.54e-07!60;CL:0000211!3.54e-07!60;CL:0000359!5.00e-07!32 | |ontology_enrichment_celltype=CL:0000055!3.37e-23!180;CL:0000057!2.01e-20!75;CL:1000306!9.30e-10!4;CL:0002547!9.30e-10!4;CL:0002554!1.20e-09!2;CL:0002620!1.40e-09!23;CL:0000680!4.77e-09!57;CL:0000056!4.77e-09!57;CL:0000355!4.77e-09!57;CL:0000183!1.11e-08!59;CL:0000048!1.43e-08!430;CL:0000723!2.53e-08!436;CL:0000187!3.05e-08!54;CL:0000034!5.31e-08!444;CL:0000192!6.40e-08!42;CL:0000514!6.40e-08!42;CL:0000393!3.54e-07!60;CL:0000211!3.54e-07!60;CL:0000359!5.00e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002548;1.04e-19;6!CL:0002494;1.59e-16;16!CL:0002596;1.43e-15;2!CL:0002579;1.04e-10;3!CL:0002592;1.04e-10;3!CL:1000306;1.89e-08;4!CL:0002547;1.89e-08;4 | |ontology_enrichment_celltype_v019=CL:0002548;1.04e-19;6!CL:0002494;1.59e-16;16!CL:0002596;1.43e-15;2!CL:0002579;1.04e-10;3!CL:0002592;1.04e-10;3!CL:1000306;1.89e-08;4!CL:0002547;1.89e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002548,1.26e-19,6;CL:0002494,1.63e-16,16;CL:0002596,1.33e-15,2;CL:0002592,8.99e-11,3;CL:0002579,9.90e-11,3;CL:1000306,1.96e-08,4;CL:0002547,1.96e-08,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!9.30e-10!4;UBERON:0007240!9.30e-10!4;UBERON:0005742!9.30e-10!4;UBERON:0005734!9.30e-10!4;UBERON:0004664!9.30e-10!4;UBERON:0004663!9.30e-10!4;UBERON:0000914!1.39e-08!83;UBERON:0002329!1.39e-08!83;UBERON:0003077!1.39e-08!83;UBERON:0003059!1.39e-08!83;UBERON:0007282!1.39e-08!83;UBERON:0009618!1.39e-08!83;UBERON:0007285!1.39e-08!83;UBERON:0001134!2.82e-08!61;UBERON:0002036!2.82e-08!61;UBERON:0003082!2.82e-08!61;UBERON:0004290!4.84e-08!70;UBERON:0002385!6.28e-08!63;UBERON:0001015!6.28e-08!63;UBERON:0000383!6.28e-08!63;UBERON:0004535!8.30e-08!110;UBERON:0005284!9.16e-08!5;UBERON:0001009!1.70e-07!113;UBERON:0002049!4.29e-07!79;UBERON:0007798!4.29e-07!79;UBERON:0004573!7.60e-07!33;UBERON:0004571!7.60e-07!33 | |ontology_enrichment_uberon=UBERON:0000415!9.30e-10!4;UBERON:0007240!9.30e-10!4;UBERON:0005742!9.30e-10!4;UBERON:0005734!9.30e-10!4;UBERON:0004664!9.30e-10!4;UBERON:0004663!9.30e-10!4;UBERON:0000914!1.39e-08!83;UBERON:0002329!1.39e-08!83;UBERON:0003077!1.39e-08!83;UBERON:0003059!1.39e-08!83;UBERON:0007282!1.39e-08!83;UBERON:0009618!1.39e-08!83;UBERON:0007285!1.39e-08!83;UBERON:0001134!2.82e-08!61;UBERON:0002036!2.82e-08!61;UBERON:0003082!2.82e-08!61;UBERON:0004290!4.84e-08!70;UBERON:0002385!6.28e-08!63;UBERON:0001015!6.28e-08!63;UBERON:0000383!6.28e-08!63;UBERON:0004535!8.30e-08!110;UBERON:0005284!9.16e-08!5;UBERON:0001009!1.70e-07!113;UBERON:0002049!4.29e-07!79;UBERON:0007798!4.29e-07!79;UBERON:0004573!7.60e-07!33;UBERON:0004571!7.60e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0005396;1.43e-15;2!UBERON:0000948;3.14e-12;22!UBERON:0007100;7.54e-11;25!UBERON:0003498;1.04e-10;3!UBERON:0005985;1.04e-10;3!UBERON:0001621;1.04e-10;3!UBERON:0004797;1.89e-08;4!UBERON:0000415;1.89e-08;4!UBERON:0007240;1.89e-08;4!UBERON:0005742;1.89e-08;4!UBERON:0005734;1.89e-08;4!UBERON:0004664;1.89e-08;4!UBERON:0004663;1.89e-08;4!UBERON:0004573;7.10e-08;33!UBERON:0004571;7.10e-08;33 | |ontology_enrichment_uberon_v019=UBERON:0005396;1.43e-15;2!UBERON:0000948;3.14e-12;22!UBERON:0007100;7.54e-11;25!UBERON:0003498;1.04e-10;3!UBERON:0005985;1.04e-10;3!UBERON:0001621;1.04e-10;3!UBERON:0004797;1.89e-08;4!UBERON:0000415;1.89e-08;4!UBERON:0007240;1.89e-08;4!UBERON:0005742;1.89e-08;4!UBERON:0005734;1.89e-08;4!UBERON:0004664;1.89e-08;4!UBERON:0004663;1.89e-08;4!UBERON:0004573;7.10e-08;33!UBERON:0004571;7.10e-08;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,1.33e-15,2;UBERON:0000948,2.90e-11,24;UBERON:0005498,2.90e-11,24;UBERON:0004140,2.90e-11,24;UBERON:0009881,2.90e-11,24;UBERON:0004141,2.90e-11,24;UBERON:0003084,2.90e-11,24;UBERON:0007005,2.90e-11,24;UBERON:0004139,2.90e-11,24;UBERON:0004291,2.90e-11,24;UBERON:0001621,8.99e-11,3;UBERON:0007100,4.32e-10,27;UBERON:0004872,7.64e-09,83;UBERON:0004573,1.81e-08,33;UBERON:0004571,1.81e-08,33;UBERON:0000415,1.96e-08,4;UBERON:0007240,1.96e-08,4;UBERON:0005742,1.96e-08,4;UBERON:0005734,1.96e-08,4;UBERON:0004664,1.96e-08,4;UBERON:0004663,1.96e-08,4;UBERON:0003498,5.70e-07,5;UBERON:0005985,5.70e-07,5;UBERON:0004535,8.66e-07,109;UBERON:0001637,8.70e-07,42;UBERON:0003509,8.70e-07,42;UBERON:0004572,8.70e-07,42 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,2.51577443545116,0.286836620748814,0,1.12135520028461,1.06748995729705,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0,0,0,0.612975591598039,0,0,0.358779271377724,0,0.423863802319124,0,0,0.515281080091258,0,0.168776332241266,0,0,0.368199594569197,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,1.15325234330131,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0,0,0.372158369359667,0.316379424718726,0,0.511795582622668,0,2.54562598340749,0,0.359744915166629,0,0,1.41527737101321,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.453411851024545,0,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,2.51577443545116,0.286836620748814,0,1.12135520028461,1.06748995729705,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0,0,0,0.612975591598039,0,0,0.358779271377724,0,0.423863802319124,0,0,0.515281080091258,0,0.168776332241266,0,0,0.368199594569197,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,1.15325234330131,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0,0,0.372158369359667,0.316379424718726,0,0.511795582622668,0,2.54562598340749,0,0.359744915166629,0,0,1.41527737101321,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.453411851024545,0,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:80841630..80841633,- | |short_description=p@chr15:80841630..80841633,- | ||
}} | }} |
Latest revision as of 04:47, 25 July 2015
Short description: | p@chr15:80841630..80841633, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:80841630..80841633, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 1.26e-19 | 6 |
cardiocyte | 1.63e-16 | 16 |
smooth muscle cell of the carotid artery | 1.33e-15 | 2 |
smooth muscle cell of the coronary artery | 8.99e-11 | 3 |
omentum preadipocyte | 9.90e-11 | 3 |
fibroblast of tunica adventitia of artery | 1.96e-08 | 4 |
fibroblast of the aortic adventitia | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 1.33e-15 | 2 |
heart | 2.90e-11 | 24 |
primitive heart tube | 2.90e-11 | 24 |
primary heart field | 2.90e-11 | 24 |
anterior lateral plate mesoderm | 2.90e-11 | 24 |
heart tube | 2.90e-11 | 24 |
heart primordium | 2.90e-11 | 24 |
cardiac mesoderm | 2.90e-11 | 24 |
cardiogenic plate | 2.90e-11 | 24 |
heart rudiment | 2.90e-11 | 24 |
coronary artery | 8.99e-11 | 3 |
primary circulatory organ | 4.32e-10 | 27 |
splanchnic layer of lateral plate mesoderm | 7.64e-09 | 83 |
systemic artery | 1.81e-08 | 33 |
systemic arterial system | 1.81e-08 | 33 |
artery wall | 1.96e-08 | 4 |
tunica adventitia of artery | 1.96e-08 | 4 |
adventitia | 1.96e-08 | 4 |
tunica adventitia of blood vessel | 1.96e-08 | 4 |
aorta tunica adventitia | 1.96e-08 | 4 |
aorta wall | 1.96e-08 | 4 |
heart blood vessel | 5.70e-07 | 5 |
coronary vessel | 5.70e-07 | 5 |
cardiovascular system | 8.66e-07 | 109 |
artery | 8.70e-07 | 42 |
arterial blood vessel | 8.70e-07 | 42 |
arterial system | 8.70e-07 | 42 |