FFCP PHASE1:Hg19::chr1:206944527..206944552,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3586 | |EntrezGene=3586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5962 | |HGNC=5962 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000367099,ENST00000471071_5end | |association_with_transcript=0bp_to_ENST00000367099,ENST00000471071_5end | ||
|cluster_id=chr1:206944527..206944552,- | |||
|coexpression_cluster_id=C687 | |coexpression_cluster_id=C687 | ||
|description=CAGE_peak_2_at_IL10_5end | |description=CAGE_peak_2_at_IL10_5end | ||
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|ontology_enrichment_celltype=CL:0002194!1.21e-49!63;CL:0000576!1.21e-49!63;CL:0000040!1.21e-49!63;CL:0000559!1.21e-49!63;CL:0002009!2.33e-49!65;CL:0002057!9.76e-45!42;CL:0000766!1.45e-43!76;CL:0000557!1.52e-43!71;CL:0000839!9.13e-43!70;CL:0000860!1.01e-40!45;CL:0002087!1.18e-29!119;CL:0000738!2.64e-28!140;CL:0000763!1.58e-27!112;CL:0000049!1.58e-27!112;CL:0002031!3.34e-25!124;CL:0000037!1.82e-20!172;CL:0000566!1.82e-20!172;CL:0000988!1.34e-19!182;CL:0002032!8.28e-19!165;CL:0000837!8.28e-19!165 | |ontology_enrichment_celltype=CL:0002194!1.21e-49!63;CL:0000576!1.21e-49!63;CL:0000040!1.21e-49!63;CL:0000559!1.21e-49!63;CL:0002009!2.33e-49!65;CL:0002057!9.76e-45!42;CL:0000766!1.45e-43!76;CL:0000557!1.52e-43!71;CL:0000839!9.13e-43!70;CL:0000860!1.01e-40!45;CL:0002087!1.18e-29!119;CL:0000738!2.64e-28!140;CL:0000763!1.58e-27!112;CL:0000049!1.58e-27!112;CL:0002031!3.34e-25!124;CL:0000037!1.82e-20!172;CL:0000566!1.82e-20!172;CL:0000988!1.34e-19!182;CL:0002032!8.28e-19!165;CL:0000837!8.28e-19!165 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.53e-83;39!CL:0000234;1.53e-83;39!CL:0000860;6.17e-83;33!CL:0002057;6.17e-83;33!CL:0000576;1.96e-56;48!CL:0000766;1.93e-40;69!CL:0000763;1.48e-19;100!CL:0000235;5.70e-19;6!CL:0002087;8.20e-15;104!CL:0000738;5.67e-13;136!CL:0002619;1.32e-11;3!CL:0000767;1.16e-09;3 | |ontology_enrichment_celltype_v019=CL:0000473;1.53e-83;39!CL:0000234;1.53e-83;39!CL:0000860;6.17e-83;33!CL:0002057;6.17e-83;33!CL:0000576;1.96e-56;48!CL:0000766;1.93e-40;69!CL:0000763;1.48e-19;100!CL:0000235;5.70e-19;6!CL:0002087;8.20e-15;104!CL:0000738;5.67e-13;136!CL:0002619;1.32e-11;3!CL:0000767;1.16e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.82e-102,59;CL:0000576,1.82e-102,59;CL:0000040,1.82e-102,59;CL:0000559,1.82e-102,59;CL:0000473,1.20e-101,48;CL:0000234,1.20e-101,48;CL:0002009,8.53e-99,61;CL:0000766,4.89e-94,72;CL:0000839,1.41e-90,66;CL:0000557,4.46e-89,67;CL:0000860,9.08e-84,42;CL:0002057,9.08e-84,42;CL:0000763,4.26e-59,108;CL:0000049,4.26e-59,108;CL:0002087,2.57e-52,115;CL:0000738,6.12e-49,136;CL:0002031,2.52e-47,120;CL:0002032,1.11e-37,161;CL:0000837,1.11e-37,161;CL:0000037,2.13e-37,168;CL:0000988,6.72e-35,177;CL:0000235,4.88e-19,6;CL:0000134,2.43e-12,354;CL:0002320,7.15e-12,361;CL:0002619,1.30e-11,3;CL:0000219,3.16e-10,386;CL:0000767,9.94e-10,3;CL:0000048,3.15e-08,427;CL:0000034,3.57e-08,441;CL:0000723,5.93e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.98e-62;42!CL:0000049;1.06e-17;108 | |ontology_enrichment_development_v019=CL:0002057;2.98e-62;42!CL:0000049;1.06e-17;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-37!102;UBERON:0003061!1.84e-37!102;UBERON:0002371!1.76e-36!80;UBERON:0002193!1.24e-34!112;UBERON:0001474!1.30e-32!86;UBERON:0002405!2.12e-28!115;UBERON:0007023!3.23e-27!115;UBERON:0004765!3.80e-26!101;UBERON:0001434!3.80e-26!101;UBERON:0003081!7.93e-13!216;UBERON:0002204!1.12e-12!167;UBERON:0001049!1.63e-10!57;UBERON:0005068!1.63e-10!57;UBERON:0006241!1.63e-10!57;UBERON:0007135!1.63e-10!57;UBERON:0000062!3.38e-10!511;UBERON:0002616!3.76e-08!59;UBERON:0003080!4.25e-08!42;UBERON:0002780!1.81e-07!41;UBERON:0001890!1.81e-07!41;UBERON:0006240!1.81e-07!41;UBERON:0002791!1.82e-07!33;UBERON:0003075!2.29e-07!86;UBERON:0007284!2.29e-07!86;UBERON:0002020!2.83e-07!34;UBERON:0003528!2.83e-07!34;UBERON:0001893!4.06e-07!34 | |ontology_enrichment_uberon=UBERON:0002390!1.84e-37!102;UBERON:0003061!1.84e-37!102;UBERON:0002371!1.76e-36!80;UBERON:0002193!1.24e-34!112;UBERON:0001474!1.30e-32!86;UBERON:0002405!2.12e-28!115;UBERON:0007023!3.23e-27!115;UBERON:0004765!3.80e-26!101;UBERON:0001434!3.80e-26!101;UBERON:0003081!7.93e-13!216;UBERON:0002204!1.12e-12!167;UBERON:0001049!1.63e-10!57;UBERON:0005068!1.63e-10!57;UBERON:0006241!1.63e-10!57;UBERON:0007135!1.63e-10!57;UBERON:0000062!3.38e-10!511;UBERON:0002616!3.76e-08!59;UBERON:0003080!4.25e-08!42;UBERON:0002780!1.81e-07!41;UBERON:0001890!1.81e-07!41;UBERON:0006240!1.81e-07!41;UBERON:0002791!1.82e-07!33;UBERON:0003075!2.29e-07!86;UBERON:0007284!2.29e-07!86;UBERON:0002020!2.83e-07!34;UBERON:0003528!2.83e-07!34;UBERON:0001893!4.06e-07!34 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.44e-77,76;UBERON:0001474,6.30e-71,82;UBERON:0002405,3.11e-64,93;UBERON:0004765,1.08e-63,90;UBERON:0002390,2.61e-63,98;UBERON:0003061,2.61e-63,98;UBERON:0002193,1.96e-56,108;UBERON:0001434,2.91e-56,100;UBERON:0002204,7.38e-31,167;UBERON:0003081,1.64e-27,203;UBERON:0000926,2.69e-15,315;UBERON:0004120,2.69e-15,315;UBERON:0006603,2.69e-15,315;UBERON:0002384,3.11e-11,371 | |||
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|short_description=p2@IL10 | |short_description=p2@IL10 | ||
}} | }} |
Latest revision as of 05:53, 20 September 2015
Short description: | p2@IL10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL10_5end |
Coexpression cluster: | C687_CD14_Macrophage_Monocytederived_Dendritic_Endothelial_Pericytes_schwannoma |
Association with transcript: | 0bp_to_ENST00000367099, ENST00000471071_5end |
EntrezGene: | IL10 |
HGNC: | 5962 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.82e-102 | 59 |
monocyte | 1.82e-102 | 59 |
monoblast | 1.82e-102 | 59 |
promonocyte | 1.82e-102 | 59 |
defensive cell | 1.20e-101 | 48 |
phagocyte | 1.20e-101 | 48 |
macrophage dendritic cell progenitor | 8.53e-99 | 61 |
myeloid leukocyte | 4.89e-94 | 72 |
myeloid lineage restricted progenitor cell | 1.41e-90 | 66 |
granulocyte monocyte progenitor cell | 4.46e-89 | 67 |
classical monocyte | 9.08e-84 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.08e-84 | 42 |
myeloid cell | 4.26e-59 | 108 |
common myeloid progenitor | 4.26e-59 | 108 |
nongranular leukocyte | 2.57e-52 | 115 |
leukocyte | 6.12e-49 | 136 |
hematopoietic lineage restricted progenitor cell | 2.52e-47 | 120 |
hematopoietic oligopotent progenitor cell | 1.11e-37 | 161 |
hematopoietic multipotent progenitor cell | 1.11e-37 | 161 |
hematopoietic stem cell | 2.13e-37 | 168 |
hematopoietic cell | 6.72e-35 | 177 |
macrophage | 4.88e-19 | 6 |
mesenchymal cell | 2.43e-12 | 354 |
connective tissue cell | 7.15e-12 | 361 |
adult endothelial progenitor cell | 1.30e-11 | 3 |
motile cell | 3.16e-10 | 386 |
basophil | 9.94e-10 | 3 |
multi fate stem cell | 3.15e-08 | 427 |
stem cell | 3.57e-08 | 441 |
somatic stem cell | 5.93e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.44e-77 | 76 |
bone element | 6.30e-71 | 82 |
immune system | 3.11e-64 | 93 |
skeletal element | 1.08e-63 | 90 |
hematopoietic system | 2.61e-63 | 98 |
blood island | 2.61e-63 | 98 |
hemolymphoid system | 1.96e-56 | 108 |
skeletal system | 2.91e-56 | 100 |
musculoskeletal system | 7.38e-31 | 167 |
lateral plate mesoderm | 1.64e-27 | 203 |
mesoderm | 2.69e-15 | 315 |
mesoderm-derived structure | 2.69e-15 | 315 |
presumptive mesoderm | 2.69e-15 | 315 |
connective tissue | 3.11e-11 | 371 |