FFCP PHASE1:Hg19::chr1:38218592..38218619,-: Difference between revisions
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|id=chr1:38218592..38218619,-
|short_description=p4@EPHA10
|description=CAGE_peak_4_at_EPHA10_5end
|association_with_transcript=-14bp_to_ENST00000437645,ENST0000054...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284656 | |EntrezGene=284656 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19987 | |HGNC=19987 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWI2 | |UniProt=F5GWI2 | ||
|association_with_transcript=-14bp_to_ENST00000437645,ENST00000540011_5end | |||
|cluster_id=chr1:38218592..38218619,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_EPHA10_5end | |||
|id=chr1:38218592..38218619,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;7.06e-34;1!CL:0000164;7.06e-34;1!CL:0000502;7.06e-34;1!CL:0000172;7.06e-34;1!CL:0000173;7.06e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.05e-34,1;CL:0000164,5.05e-34,1;CL:0000502,5.05e-34,1;CL:0000172,5.05e-34,1;CL:0000173,5.05e-34,1;CL:0002351,5.05e-34,1 | |||
|ontology_enrichment_development_v019=CL:0002351;7.06e-34;1!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;7.06e-34;1!DOID:169;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.05e-34,1;DOID:169,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.74e-39!57;UBERON:0005068!1.74e-39!57;UBERON:0006241!1.74e-39!57;UBERON:0007135!1.74e-39!57;UBERON:0000955!5.12e-39!69;UBERON:0006238!5.12e-39!69;UBERON:0002616!6.39e-38!59;UBERON:0002780!1.18e-37!41;UBERON:0001890!1.18e-37!41;UBERON:0006240!1.18e-37!41;UBERON:0003080!1.24e-36!42;UBERON:0001869!6.26e-33!32;UBERON:0005743!5.21e-32!86;UBERON:0001017!1.02e-31!82;UBERON:0001893!9.20e-31!34;UBERON:0002020!1.14e-30!34;UBERON:0003528!1.14e-30!34;UBERON:0000073!2.17e-30!94;UBERON:0001016!2.17e-30!94;UBERON:0002791!2.29e-28!33;UBERON:0003056!3.76e-28!61;UBERON:0007023!5.63e-28!115;UBERON:0003075!8.09e-28!86;UBERON:0007284!8.09e-28!86;UBERON:0002346!2.97e-26!90;UBERON:0002619!1.47e-22!22;UBERON:0001950!2.60e-21!20;UBERON:0000033!4.22e-20!123;UBERON:0000956!1.34e-19!25;UBERON:0000203!1.34e-19!25;UBERON:0000153!8.25e-19!129;UBERON:0007811!8.25e-19!129;UBERON:0004121!1.06e-15!169;UBERON:0000924!3.76e-15!173;UBERON:0006601!3.76e-15!173;UBERON:0000200!2.22e-14!6;UBERON:0000369!4.60e-14!4;UBERON:0002435!4.60e-14!4;UBERON:0000204!4.60e-14!4;UBERON:0010082!4.60e-14!4;UBERON:0002420!3.09e-13!9;UBERON:0007245!3.09e-13!9;UBERON:0010009!3.09e-13!9;UBERON:0010011!3.09e-13!9;UBERON:0000454!3.09e-13!9;UBERON:0002308!5.01e-13!9;UBERON:0000125!5.01e-13!9;UBERON:0009663!4.82e-12!7;UBERON:0000025!9.93e-12!194;UBERON:0005383!3.44e-11!3;UBERON:0005382!3.44e-11!3;UBERON:0003296!8.12e-09!4;UBERON:0010133!8.12e-09!4;UBERON:0000007!2.54e-08!2;UBERON:0001894!3.06e-08!7;UBERON:0006222!3.06e-08!7;UBERON:0001870!5.90e-08!2;UBERON:0004111!6.32e-08!241;UBERON:0001873!6.54e-08!2;UBERON:0010122!6.54e-08!2;UBERON:0000064!7.04e-08!219;UBERON:0000483!2.72e-07!309;UBERON:0000119!3.86e-07!312;UBERON:0001871!4.43e-07!7;UBERON:0004733!6.00e-07!12;UBERON:0002028!6.00e-07!12;UBERON:0007277!6.00e-07!12;UBERON:0001872!8.20e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0002021;7.01e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0002021,7.01e-08,5;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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| ||
|short_description=p4@EPHA10 | |||
}} | }} |
Latest revision as of 22:14, 17 September 2015
Short description: | p4@EPHA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EPHA10_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -14bp_to_ENST00000437645, ENST00000540011_5end |
EntrezGene: | EPHA10 |
HGNC: | 19987 |
UniProt: | F5GWI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.05e-34 | 1 |
enteroendocrine cell | 5.05e-34 | 1 |
type D enteroendocrine cell | 5.05e-34 | 1 |
somatostatin secreting cell | 5.05e-34 | 1 |
pancreatic D cell | 5.05e-34 | 1 |
progenitor cell of endocrine pancreas | 5.05e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
occipital lobe | 7.01e-08 | 5 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.05e-34 | 1 |
neuroendocrine tumor | 8.48e-07 | 6 |