FFCP PHASE1:Hg19::chr12:7177864..7177876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:7177864..7177876,+ | |||
|coexpression_cluster_id=C424 | |coexpression_cluster_id=C424 | ||
|description=CAGE_peak_at_chr12:7177864..7177876,+ | |description=CAGE_peak_at_chr12:7177864..7177876,+ | ||
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|ontology_enrichment_celltype=CL:0000057!1.89e-12!75;CL:0000055!8.02e-09!180;CL:0000136!2.13e-08!15;CL:0002334!9.00e-07!12 | |ontology_enrichment_celltype=CL:0000057!1.89e-12!75;CL:0000055!8.02e-09!180;CL:0000136!2.13e-08!15;CL:0002334!9.00e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.69e-15;13!CL:0000135;1.54e-14;3!CL:0000388;1.54e-14;3!CL:0000153;2.42e-12;9!CL:0000447;2.42e-12;9!CL:0000499;1.65e-11;28!CL:0002617;1.12e-09;2!CL:0002561;2.38e-09;2!CL:0000327;2.83e-07;15!CL:0000214;3.62e-07;3!CL:0000138;3.96e-07;6!CL:0002615;4.39e-07;3 | |ontology_enrichment_celltype_v019=CL:0000136;1.69e-15;13!CL:0000135;1.54e-14;3!CL:0000388;1.54e-14;3!CL:0000153;2.42e-12;9!CL:0000447;2.42e-12;9!CL:0000499;1.65e-11;28!CL:0002617;1.12e-09;2!CL:0002561;2.38e-09;2!CL:0000327;2.83e-07;15!CL:0000214;3.62e-07;3!CL:0000138;3.96e-07;6!CL:0002615;4.39e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.55e-17,15;CL:0000135,1.42e-14,3;CL:0000388,1.42e-14,3;CL:0000153,3.08e-12,9;CL:0000447,3.08e-12,9;CL:0000499,1.83e-11,28;CL:0002617,1.77e-09,2;CL:0002561,2.29e-09,2;CL:0000327,3.25e-07,15;CL:0000214,3.85e-07,3;CL:0002615,4.47e-07,3;CL:0000058,4.70e-07,6;CL:0000138,4.70e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.54e-14;3!UBERON:0000043;1.54e-14;3!UBERON:0007845;1.54e-14;3!UBERON:0005933;2.38e-09;2!UBERON:0005942;2.38e-09;2!UBERON:0005932;2.38e-09;2!UBERON:0004457;2.08e-08;9!UBERON:0000042;2.08e-08;9!UBERON:0001013;2.86e-07;14!UBERON:0006915;3.62e-07;3!UBERON:0007616;3.62e-07;3!UBERON:0002217;3.62e-07;3!UBERON:0002018;3.62e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0007846;1.54e-14;3!UBERON:0000043;1.54e-14;3!UBERON:0007845;1.54e-14;3!UBERON:0005933;2.38e-09;2!UBERON:0005942;2.38e-09;2!UBERON:0005932;2.38e-09;2!UBERON:0004457;2.08e-08;9!UBERON:0000042;2.08e-08;9!UBERON:0001013;2.86e-07;14!UBERON:0006915;3.62e-07;3!UBERON:0007616;3.62e-07;3!UBERON:0002217;3.62e-07;3!UBERON:0002018;3.62e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.42e-14,3;UBERON:0000043,1.42e-14,3;UBERON:0007845,1.42e-14,3;UBERON:0005933,2.29e-09,2;UBERON:0005942,2.29e-09,2;UBERON:0005932,2.29e-09,2;UBERON:0001013,2.36e-07,14;UBERON:0006915,3.85e-07,3;UBERON:0007616,3.85e-07,3;UBERON:0002217,3.85e-07,3;UBERON:0002018,3.85e-07,3 | |||
|phase1_expression=1.09007027562334,2.99740733447376,0.704772020479856,3.00219895059391,4.46961094427288,1.74467704820074,0,1.26343974685366,1.30592814099919,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,2.1686349143074,0,1.30361867064741,0.795285947051099,2.43317435151318,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0.397227542439656,6.88407889797153,1.41867352879343,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.309977343527296,1.18800285728205,1.97813543422845,0,0,0,0,0,0,0.612975591598039,0.901428353439581,0.113432183160021,0,0.640672166455702,0.847727604638247,0.300091096084402,0.721367704669072,0,0,0.337552664482532,0.389748020644795,0.757301322732344,0.0920498986422993,2.42469085228218,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,1.39310378409594,1.44375896333917,0.236613600079688,0,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,19.0132552232746,7.86261773342101,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0,0,0.301439377059586,0,1.09970290300263,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,1.42743191037729,0.946214490203608,0.937131319941706,0.300946099727719,0,0,0,0.184369168541703,0.695068915744663,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,1.96462066103151,0.384417447767103,0,0.804269605718038,0,0.308419387605311,0.355123450626254,0.0821271560138091,1.03850885836724,0.464841513839837,0,0,0,0.68888668898764,0.910455840033585,2.49136388422906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0,0,0,0.096670718292122,0.462145851343933,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0,1.94970791705028,0,0.409499734223957,1.41405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0.709522128141196,4.01104507065562,5.26871828735843,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.797594390929008,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.305994652908965,0.288950589901519,0,0,0,0,0,0.558564802544508,0.687481272035051,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0.35857467866569,0,1.42939065274673,0,0,0.542999601753713,0,0.653174720218818,0,0,0.340776043570843,0.113312091520126,0.439656701034247,0,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0.470531639396343,0,0,0,0.467426619694449,1.66441758450784,0.189403005275089,1.25783950876288,0.889811221596536,0.228840068396924,0.604923695052956,0.310874401165561,0.147855149989634,0,0,0.310525913752519,0.829412415681711,0.53168342911599,0,0.901545653983311,1.14241563650639,0.813741466409323,0.181848659202559,0.322231671127465,0,0.796191777397232,0,1.71697852591396,0.673498977531838,1.26184898228651,0,0.428883182749851,0,0.906823702049089,0,0.244736704506468,0,0.617602894321944,1.97355644620836,0.176689145945881,0.38582807654183,0.337884881306145,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.062454773532,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0.163771917510097,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.177404740325278,0,0.857440047187092,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.980593287015622,0,0,0,0.4226557275834,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,6.32391530883477,2.77305377178851,4.75889218336168,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0.653150243690884,0.684466602170562,0,0.215166616178029,0,0,0,0,0,0,0,0.4068961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| ||
|short_description=p@chr12:7177864..7177876,+ | |short_description=p@chr12:7177864..7177876,+ | ||
}} | }} |
Latest revision as of 12:12, 24 July 2015
Short description: | p@chr12:7177864..7177876, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7177864..7177876, + |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.55e-17 | 15 |
fibrocyte | 1.42e-14 | 3 |
tendon cell | 1.42e-14 | 3 |
GAG secreting cell | 3.08e-12 | 9 |
carbohydrate secreting cell | 3.08e-12 | 9 |
stromal cell | 1.83e-11 | 28 |
adipocyte of breast | 1.77e-09 | 2 |
outer root sheath cell | 2.29e-09 | 2 |
extracellular matrix secreting cell | 3.25e-07 | 15 |
synovial cell | 3.85e-07 | 3 |
adipocyte of omentum tissue | 4.47e-07 | 3 |
chondroblast | 4.70e-07 | 6 |
chondrocyte | 4.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.42e-14 | 3 |
tendon | 1.42e-14 | 3 |
regular connective tissue | 1.42e-14 | 3 |
hair root sheath | 2.29e-09 | 2 |
hair outer root sheath | 2.29e-09 | 2 |
bulb of hair follicle | 2.29e-09 | 2 |
adipose tissue | 2.36e-07 | 14 |
stratified squamous epithelium | 3.85e-07 | 3 |
layer of synovial tissue | 3.85e-07 | 3 |
synovial joint | 3.85e-07 | 3 |
synovial membrane of synovial joint | 3.85e-07 | 3 |