FFCP PHASE1:Hg19::chr1:36786251..36786257,+: Difference between revisions
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|id=chr1:36786251..36786257,+
|short_description=p12@SH3D21
|description=CAGE_peak_12_at_SH3D21_5end
|association_with_transcript=403bp_to_BC036763_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79729 | |EntrezGene=79729 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=26236 | |HGNC=26236 | ||
|TSSclassifier=strong | |||
|UniProt=A4FU49 | |UniProt=A4FU49 | ||
|association_with_transcript=403bp_to_BC036763_5end | |||
|cluster_id=chr1:36786251..36786257,+ | |||
|coexpression_cluster_id=C739 | |||
|description=CAGE_peak_12_at_SH3D21_5end | |||
|id=chr1:36786251..36786257,+ | |||
|ontology_enrichment_celltype=CL:0000840!2.89e-12!5;CL:0001029!2.89e-12!5;CL:0000557!7.14e-11!71;CL:0002194!3.31e-10!63;CL:0000576!3.31e-10!63;CL:0000040!3.31e-10!63;CL:0000559!3.31e-10!63;CL:0002009!7.58e-10!65;CL:0001024!4.89e-09!1;CL:0000839!4.89e-09!70;CL:0000990!2.47e-08!8;CL:0000766!3.33e-08!76;CL:0002393!4.45e-08!9;CL:0002397!4.45e-08!9;CL:0000451!6.79e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.46e-50;1!CL:0000557;1.46e-50;1!CL:0000840;9.08e-34;5!CL:0000990;6.07e-23;8!CL:0000451;5.38e-19;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,8.35e-34,5;CL:0001029,8.35e-34,5;CL:0000990,5.74e-23,8;CL:0000451,5.14e-19,10;CL:0000557,1.71e-12,67;CL:0002194,2.64e-08,59;CL:0000576,2.64e-08,59;CL:0000040,2.64e-08,59;CL:0000559,2.64e-08,59;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0002009,4.61e-08,61;CL:0000839,1.60e-07,66;CL:0000766,5.71e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.30e-11!80;UBERON:0001474!1.97e-10!86;UBERON:0004765!3.61e-10!101;UBERON:0001434!3.61e-10!101;UBERON:0002390!5.08e-10!102;UBERON:0003061!5.08e-10!102;UBERON:0002193!6.36e-09!112;UBERON:0002171!6.65e-09!1;UBERON:0006518!6.65e-09!1;UBERON:0008949!6.65e-09!1;UBERON:0000101!6.65e-09!1;UBERON:0002167!6.65e-09!1;UBERON:0002405!1.25e-08!115;UBERON:0002022!2.22e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.92e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0002405,2.87e-09,93;UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0001434,1.11e-08,100;UBERON:0002193,4.22e-08,108 | |||
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|short_description=p12@SH3D21 | |||
}} | }} |
Latest revision as of 20:51, 17 September 2015
Short description: | p12@SH3D21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SH3D21_5end |
Coexpression cluster: | C739_granulocyte_CD34_CD19_CD14CD16_CD4_Mesothelial_Dendritic |
Association with transcript: | 403bp_to_BC036763_5end |
EntrezGene: | SH3D21 |
HGNC: | 26236 |
UniProt: | A4FU49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 8.35e-34 | 5 |
common dendritic progenitor | 8.35e-34 | 5 |
conventional dendritic cell | 5.74e-23 | 8 |
dendritic cell | 5.14e-19 | 10 |
granulocyte monocyte progenitor cell | 1.71e-12 | 67 |
monopoietic cell | 2.64e-08 | 59 |
monocyte | 2.64e-08 | 59 |
monoblast | 2.64e-08 | 59 |
promonocyte | 2.64e-08 | 59 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
macrophage dendritic cell progenitor | 4.61e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.60e-07 | 66 |
myeloid leukocyte | 5.71e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.92e-11 | 76 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.51e-09 | 90 |
immune system | 2.87e-09 | 93 |
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
skeletal system | 1.11e-08 | 100 |
hemolymphoid system | 4.22e-08 | 108 |