FFCP PHASE1:Hg19::chr1:164600166..164600175,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000482110_5end | |association_with_transcript=-42bp_to_ENST00000482110_5end | ||
|cluster_id=chr1:164600166..164600175,+ | |||
|coexpression_cluster_id=C326 | |coexpression_cluster_id=C326 | ||
|description=CAGE_peak_47_at_PBX1_5end | |description=CAGE_peak_47_at_PBX1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!8.29e-26!3;CL:0000861!8.29e-26!3;CL:0000319!2.37e-10!1;CL:0000167!5.30e-10!1;CL:0000164!5.30e-10!1;CL:0000502!5.30e-10!1;CL:0000172!5.30e-10!1;CL:0000173!5.30e-10!1;CL:0002351!5.30e-10!1;CL:0000235!3.78e-08!10;CL:0000066!4.37e-08!254 | |ontology_enrichment_celltype=CL:0002150!8.29e-26!3;CL:0000861!8.29e-26!3;CL:0000319!2.37e-10!1;CL:0000167!5.30e-10!1;CL:0000164!5.30e-10!1;CL:0000502!5.30e-10!1;CL:0000172!5.30e-10!1;CL:0000173!5.30e-10!1;CL:0002351!5.30e-10!1;CL:0000235!3.78e-08!10;CL:0000066!4.37e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000319;2.21e-40;1!CL:0000159;5.69e-21;2!CL:0000082;2.26e-09;19 | |ontology_enrichment_celltype_v019=CL:0000319;2.21e-40;1!CL:0000159;5.69e-21;2!CL:0000082;2.26e-09;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.30e-40,1;CL:0000159,6.96e-21,2;CL:0000082,2.17e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.88e-13;30 | |ontology_enrichment_development_v019=UBERON:0001041;9.88e-13;30 | ||
|ontology_enrichment_disease=DOID:3030!2.37e-10!1;DOID:4430!5.30e-10!1;DOID:305!6.88e-10!106;DOID:0050687!1.47e-09!143 | |ontology_enrichment_disease=DOID:3030!2.37e-10!1;DOID:4430!5.30e-10!1;DOID:305!6.88e-10!106;DOID:0050687!1.47e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:3030;2.21e-40;1!DOID:4556;1.83e-14;3!DOID:1324;1.34e-11;15!DOID:0050615;6.14e-11;16!DOID:3908;3.22e-09;5 | |ontology_enrichment_disease_v019=DOID:3030;2.21e-40;1!DOID:4556;1.83e-14;3!DOID:1324;1.34e-11;15!DOID:0050615;6.14e-11;16!DOID:3908;3.22e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,3.30e-40,1;DOID:4556,1.60e-14,3;DOID:1324,1.27e-11,15;DOID:0050615,5.84e-11,16;DOID:305,5.66e-10,106;DOID:3908,2.97e-09,5;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001301!5.79e-10!1;UBERON:0000997!8.99e-10!1;UBERON:0005056!8.99e-10!1;UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1 | |ontology_enrichment_uberon=UBERON:0001301!5.79e-10!1;UBERON:0000997!8.99e-10!1;UBERON:0005056!8.99e-10!1;UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002394;2.53e-11;4!UBERON:0003928;2.53e-11;4!UBERON:0004802;2.26e-09;19!UBERON:0000115;2.26e-09;19!UBERON:0002048;3.15e-08;22!UBERON:0004807;3.15e-08;22!UBERON:0000117;3.15e-08;22!UBERON:0000171;3.15e-08;22!UBERON:0000170;3.15e-08;22!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002394;2.53e-11;4!UBERON:0003928;2.53e-11;4!UBERON:0004802;2.26e-09;19!UBERON:0000115;2.26e-09;19!UBERON:0002048;3.15e-08;22!UBERON:0004807;3.15e-08;22!UBERON:0000117;3.15e-08;22!UBERON:0000171;3.15e-08;22!UBERON:0000170;3.15e-08;22!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,2.17e-09,19;UBERON:0000115,2.17e-09,19;UBERON:0002048,3.04e-08,22;UBERON:0000117,3.04e-08,22;UBERON:0000171,3.04e-08,22;UBERON:0000170,3.04e-08,22;UBERON:0005597,3.04e-08,22;UBERON:0000118,3.04e-08,22;UBERON:0002394,5.54e-08,6;UBERON:0003928,5.54e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29650819221462,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6135860539956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22412889249628,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29650819221462,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6135860539956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22412889249628,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p47@PBX1 | |short_description=p47@PBX1 | ||
}} | }} |
Latest revision as of 09:21, 18 September 2015
Short description: | p47@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_47_at_PBX1_5end |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | -42bp_to_ENST00000482110_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.30e-40 | 1 |
seromucus secreting cell | 6.96e-21 | 2 |
epithelial cell of lung | 2.17e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 2.17e-09 | 19 |
lung epithelium | 2.17e-09 | 19 |
lung | 3.04e-08 | 22 |
respiratory tube | 3.04e-08 | 22 |
respiration organ | 3.04e-08 | 22 |
pair of lungs | 3.04e-08 | 22 |
lung primordium | 3.04e-08 | 22 |
lung bud | 3.04e-08 | 22 |
bile duct | 5.54e-08 | 6 |
digestive system duct | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.30e-40 | 1 |
lung large cell carcinoma | 1.60e-14 | 3 |
lung cancer | 1.27e-11 | 15 |
respiratory system cancer | 5.84e-11 | 16 |
carcinoma | 5.66e-10 | 106 |
non-small cell lung carcinoma | 2.97e-09 | 5 |
cell type cancer | 1.55e-07 | 143 |