FFCP PHASE1:Hg19::chr9:116327902..116327908,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_uc011lxh.1_5end | |association_with_transcript=-66bp_to_uc011lxh.1_5end | ||
|cluster_id=chr9:116327902..116327908,+ | |||
|description=CAGE_peak_35_at_RGS3_5end | |description=CAGE_peak_35_at_RGS3_5end | ||
|id=chr9:116327902..116327908,+ | |id=chr9:116327902..116327908,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |ontology_enrichment_celltype_v019=CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.99e-50;1!UBERON:0004140;3.99e-50;1!UBERON:0004872;2.18e-08;7 | |ontology_enrichment_development_v019=UBERON:0008801;3.99e-50;1!UBERON:0004140;3.99e-50;1!UBERON:0004872;2.18e-08;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;7.14e-26;2 | |ontology_enrichment_disease_v019=DOID:3307;7.14e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.42e-10!173;UBERON:0006601!1.42e-10!173;UBERON:0004121!7.93e-10!169;UBERON:0002346!1.22e-09!90;UBERON:0007023!6.47e-09!115;UBERON:0003075!7.96e-09!86;UBERON:0007284!7.96e-09!86;UBERON:0000033!6.15e-08!123;UBERON:0000153!3.56e-07!129;UBERON:0007811!3.56e-07!129 | |ontology_enrichment_uberon=UBERON:0000924!1.42e-10!173;UBERON:0006601!1.42e-10!173;UBERON:0004121!7.93e-10!169;UBERON:0002346!1.22e-09!90;UBERON:0007023!6.47e-09!115;UBERON:0003075!7.96e-09!86;UBERON:0007284!7.96e-09!86;UBERON:0000033!6.15e-08!123;UBERON:0000153!3.56e-07!129;UBERON:0007811!3.56e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001831;3.99e-50;1!UBERON:0001567;3.99e-50;1!UBERON:0001829;7.14e-26;2!UBERON:0004089;7.14e-26;2!UBERON:0001044;1.44e-09;6!UBERON:0003293;1.44e-09;6!UBERON:0003294;1.44e-09;6!UBERON:0010047;1.44e-09;6!UBERON:0003408;1.44e-09;6!UBERON:0000167;1.44e-09;6 | |ontology_enrichment_uberon_v019=UBERON:0001831;3.99e-50;1!UBERON:0001567;3.99e-50;1!UBERON:0001829;7.14e-26;2!UBERON:0004089;7.14e-26;2!UBERON:0001044;1.44e-09;6!UBERON:0003293;1.44e-09;6!UBERON:0003294;1.44e-09;6!UBERON:0010047;1.44e-09;6!UBERON:0003408;1.44e-09;6!UBERON:0000167;1.44e-09;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,6.58e-50,1;UBERON:0001567,6.58e-50,1;UBERON:0008801,6.58e-50,1;UBERON:0001829,9.18e-26,2;UBERON:0004089,9.18e-26,2;UBERON:0001044,1.57e-09,6;UBERON:0003293,1.57e-09,6;UBERON:0003294,1.57e-09,6;UBERON:0010047,1.57e-09,6;UBERON:0000167,1.57e-09,6 | |||
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| ||
|short_description=p35@RGS3 | |short_description=p35@RGS3 | ||
}} | }} |
Latest revision as of 07:24, 20 September 2015
Short description: | p35@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_uc011lxh.1_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 6.58e-50 | 1 |
cheek | 6.58e-50 | 1 |
parotid gland primordium | 6.58e-50 | 1 |
major salivary gland | 9.18e-26 | 2 |
midface | 9.18e-26 | 2 |
saliva-secreting gland | 1.57e-09 | 6 |
gland of oral region | 1.57e-09 | 6 |
gland of foregut | 1.57e-09 | 6 |
oral gland | 1.57e-09 | 6 |
oral cavity | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
teratoma | 5.56e-26 | 2 |