FFCP PHASE1:Hg19::chr1:35657108..35657135,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:35657108..35657135,-
|short_description=p5@SFPQ
|description=CAGE_peak_5_at_SFPQ_5end
|association_with_transcript=-83bp_to_X16850_5end
|EntrezGene=6421
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6421 | |EntrezGene=6421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10774 | |HGNC=10774 | ||
|TSSclassifier=strong | |||
|UniProt=P23246 | |UniProt=P23246 | ||
|association_with_transcript=-83bp_to_X16850_5end | |||
|cluster_id=chr1:35657108..35657135,- | |||
|coexpression_cluster_id=C1857 | |||
|description=CAGE_peak_5_at_SFPQ_5end | |||
|id=chr1:35657108..35657135,- | |||
|ontology_enrichment_celltype=CL:0002087!4.36e-11!119;CL:0000037!5.29e-11!172;CL:0000566!5.29e-11!172;CL:0000988!5.35e-11!182;CL:0002032!1.76e-10!165;CL:0000837!1.76e-10!165;CL:0002031!1.11e-09!124;CL:0000860!1.30e-08!45;CL:0000738!1.47e-08!140;CL:0002057!2.10e-08!42;CL:0000548!1.82e-07!679;CL:0000004!1.82e-07!679;CL:0000255!1.82e-07!679;CL:0000012!1.95e-07!682;CL:0000219!6.75e-07!390;CL:0000063!7.79e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.20e-10;33!CL:0002057;9.20e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.84e-13,177;CL:0000037,1.07e-12,168;CL:0002032,1.53e-12,161;CL:0000837,1.53e-12,161;CL:0002087,3.52e-12,115;CL:0002031,6.83e-11,120;CL:0000860,3.30e-10,42;CL:0002057,3.30e-10,42;CL:0000738,7.69e-10,136;CL:0000473,7.19e-09,48;CL:0000234,7.19e-09,48;CL:0002009,3.98e-07,61;CL:0000763,3.99e-07,108;CL:0000049,3.99e-07,108;CL:0000219,5.47e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.98e-08;42 | |||
|ontology_enrichment_disease=DOID:162!1.46e-08!235;DOID:14566!2.21e-08!239;DOID:2531!6.58e-07!51;DOID:0060083!6.58e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@SFPQ | |||
}} | }} |
Latest revision as of 18:28, 17 September 2015
Short description: | p5@SFPQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SFPQ_5end |
Coexpression cluster: | C1857_CD14_acute_CD4_diffuse_CD8_medulloblastoma_Neutrophils |
Association with transcript: | -83bp_to_X16850_5end |
EntrezGene: | SFPQ |
HGNC: | 10774 |
UniProt: | P23246 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.84e-13 | 177 |
hematopoietic stem cell | 1.07e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.53e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-12 | 161 |
nongranular leukocyte | 3.52e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 6.83e-11 | 120 |
classical monocyte | 3.30e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.30e-10 | 42 |
leukocyte | 7.69e-10 | 136 |
defensive cell | 7.19e-09 | 48 |
phagocyte | 7.19e-09 | 48 |
macrophage dendritic cell progenitor | 3.98e-07 | 61 |
myeloid cell | 3.99e-07 | 108 |
common myeloid progenitor | 3.99e-07 | 108 |
motile cell | 5.47e-07 | 386 |