FFCP PHASE1:Hg19::chr17:4843554..4843577,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26001 | |EntrezGene=26001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24544 | |HGNC=24544 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H6Y7 | |UniProt=Q9H6Y7 | ||
|association_with_transcript=-52bp_to_NM_015528,uc002fzs.2_5end | |association_with_transcript=-52bp_to_NM_015528,uc002fzs.2_5end | ||
|cluster_id=chr17:4843554..4843577,+ | |||
|description=CAGE_peak_6_at_RNF167_5end | |description=CAGE_peak_6_at_RNF167_5end | ||
|id=chr17:4843554..4843577,+ | |id=chr17:4843554..4843577,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.75e-10!140;CL:0002031!3.00e-10!124;CL:0002087!6.45e-10!119;CL:0000838!2.53e-07!52;CL:0000037!8.95e-07!172;CL:0000566!8.95e-07!172;CL:0000542!9.66e-07!53;CL:0000051!9.66e-07!53 | |ontology_enrichment_celltype=CL:0000738!1.75e-10!140;CL:0002031!3.00e-10!124;CL:0002087!6.45e-10!119;CL:0000838!2.53e-07!52;CL:0000037!8.95e-07!172;CL:0000566!8.95e-07!172;CL:0000542!9.66e-07!53;CL:0000051!9.66e-07!53 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.51e-10,136;CL:0002031,7.55e-10,120;CL:0002087,1.64e-09,115;CL:0000838,2.64e-07,52 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.45e-12!115;UBERON:0001049!1.49e-09!57;UBERON:0005068!1.49e-09!57;UBERON:0006241!1.49e-09!57;UBERON:0007135!1.49e-09!57;UBERON:0002390!7.47e-08!102;UBERON:0003061!7.47e-08!102;UBERON:0002616!1.19e-07!59;UBERON:0001893!3.20e-07!34;UBERON:0000178!4.95e-07!15;UBERON:0000179!4.95e-07!15;UBERON:0000463!4.95e-07!15;UBERON:0002791!5.59e-07!33;UBERON:0005743!7.68e-07!86;UBERON:0001017!8.73e-07!82;UBERON:0001557!8.93e-07!19 | |ontology_enrichment_uberon=UBERON:0007023!4.45e-12!115;UBERON:0001049!1.49e-09!57;UBERON:0005068!1.49e-09!57;UBERON:0006241!1.49e-09!57;UBERON:0007135!1.49e-09!57;UBERON:0002390!7.47e-08!102;UBERON:0003061!7.47e-08!102;UBERON:0002616!1.19e-07!59;UBERON:0001893!3.20e-07!34;UBERON:0000178!4.95e-07!15;UBERON:0000179!4.95e-07!15;UBERON:0000463!4.95e-07!15;UBERON:0002791!5.59e-07!33;UBERON:0005743!7.68e-07!86;UBERON:0001017!8.73e-07!82;UBERON:0001557!8.93e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.48e-07;15!UBERON:0000179;5.48e-07;15!UBERON:0000463;5.48e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.48e-07;15!UBERON:0000179;5.48e-07;15!UBERON:0000463;5.48e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.58e-12,114;UBERON:0001049,3.56e-09,56;UBERON:0005068,3.56e-09,56;UBERON:0006241,3.56e-09,56;UBERON:0007135,3.56e-09,56;UBERON:0000073,1.60e-08,53;UBERON:0002616,1.60e-08,53;UBERON:0002390,1.60e-07,98;UBERON:0003061,1.60e-07,98;UBERON:0001893,3.13e-07,34;UBERON:0000178,4.90e-07,15;UBERON:0000179,4.90e-07,15;UBERON:0000463,4.90e-07,15;UBERON:0003075,6.97e-07,82;UBERON:0007284,6.97e-07,82;UBERON:0001557,8.85e-07,19 | |||
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| ||
|short_description=p6@RNF167 | |short_description=p6@RNF167 | ||
}} | }} |
Latest revision as of 01:52, 16 September 2015
Short description: | p6@RNF167 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RNF167_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_NM_015528, uc002fzs.2_5end |
EntrezGene: | RNF167 |
HGNC: | 24544 |
UniProt: | Q9H6Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.51e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 7.55e-10 | 120 |
nongranular leukocyte | 1.64e-09 | 115 |
lymphoid lineage restricted progenitor cell | 2.64e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.58e-12 | 114 |
neural tube | 3.56e-09 | 56 |
neural rod | 3.56e-09 | 56 |
future spinal cord | 3.56e-09 | 56 |
neural keel | 3.56e-09 | 56 |
regional part of nervous system | 1.60e-08 | 53 |
regional part of brain | 1.60e-08 | 53 |
hematopoietic system | 1.60e-07 | 98 |
blood island | 1.60e-07 | 98 |
telencephalon | 3.13e-07 | 34 |
blood | 4.90e-07 | 15 |
haemolymphatic fluid | 4.90e-07 | 15 |
organism substance | 4.90e-07 | 15 |
neural plate | 6.97e-07 | 82 |
presumptive neural plate | 6.97e-07 | 82 |
upper respiratory tract | 8.85e-07 | 19 |