FFCP PHASE1:Hg19::chr10:79700488..79700501,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:79700488..79700501,- | |||
|description=CAGE_peak_at_chr10:79700488..79700501,- | |description=CAGE_peak_at_chr10:79700488..79700501,- | ||
|id=chr10:79700488..79700501,- | |id=chr10:79700488..79700501,- | ||
|ontology_enrichment_celltype=CL:0002159!6.43e-13!13;CL:0000066!7.40e-11!254;CL:0002076!1.44e-09!43;CL:0000244!4.04e-09!4;CL:0000731!4.04e-09!4;CL:0002621!3.26e-08!3;CL:0002166!2.14e-07!3;CL:0000135!2.49e-07!3;CL:0000386!2.49e-07!3;CL:0000388!2.49e-07!3;CL:0002077!3.68e-07!33;CL:0002504!8.83e-07!3;CL:1000279!8.83e-07!3;CL:1000280!8.83e-07!3;CL:0000223!9.70e-07!59 | |ontology_enrichment_celltype=CL:0002159!6.43e-13!13;CL:0000066!7.40e-11!254;CL:0002076!1.44e-09!43;CL:0000244!4.04e-09!4;CL:0000731!4.04e-09!4;CL:0002621!3.26e-08!3;CL:0002166!2.14e-07!3;CL:0000135!2.49e-07!3;CL:0000386!2.49e-07!3;CL:0000388!2.49e-07!3;CL:0002077!3.68e-07!33;CL:0002504!8.83e-07!3;CL:1000279!8.83e-07!3;CL:1000280!8.83e-07!3;CL:0000223!9.70e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002621;4.26e-29;3!CL:0000575;3.84e-20;2!CL:0002251;9.74e-12;20!CL:0002159;3.45e-11;14!CL:0002076;1.23e-07;42 | |ontology_enrichment_celltype_v019=CL:0002621;4.26e-29;3!CL:0000575;3.84e-20;2!CL:0002251;9.74e-12;20!CL:0002159;3.45e-11;14!CL:0002076;1.23e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.91e-29,3;CL:0000575,6.54e-20,2;CL:0002251,8.90e-12,20;CL:0002159,4.17e-11,14;CL:0002076,2.67e-10,42;CL:0000076,1.04e-08,63;CL:0000066,3.43e-08,253;CL:0000223,2.92e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!1.31e-09!14 | |ontology_enrichment_disease=DOID:1749!1.31e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.53e-11;1!DOID:3149;2.53e-11;1!DOID:1749;3.45e-11;14 | |ontology_enrichment_disease_v019=DOID:3151;2.53e-11;1!DOID:3149;2.53e-11;1!DOID:1749;3.45e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,2.53e-11,1;DOID:3149,2.53e-11,1;DOID:1749,3.46e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000365!1.30e-10!5;UBERON:0000161!1.43e-10!35;UBERON:0001708!3.63e-09!4;UBERON:0001704!3.63e-09!4;UBERON:0001004!5.70e-09!72;UBERON:0000166!6.68e-09!21;UBERON:0005910!9.05e-09!6;UBERON:0003126!3.10e-08!7;UBERON:0001005!3.10e-08!7;UBERON:0001949!3.26e-08!3;UBERON:0004119!5.46e-08!169;UBERON:0000925!5.46e-08!169;UBERON:0006595!5.46e-08!169;UBERON:0000974!2.24e-07!10;UBERON:0000043!2.49e-07!3;UBERON:0007196!4.09e-07!14;UBERON:0001558!4.09e-07!14 | |ontology_enrichment_uberon=UBERON:0000365!1.30e-10!5;UBERON:0000161!1.43e-10!35;UBERON:0001708!3.63e-09!4;UBERON:0001704!3.63e-09!4;UBERON:0001004!5.70e-09!72;UBERON:0000166!6.68e-09!21;UBERON:0005910!9.05e-09!6;UBERON:0003126!3.10e-08!7;UBERON:0001005!3.10e-08!7;UBERON:0001949!3.26e-08!3;UBERON:0004119!5.46e-08!169;UBERON:0000925!5.46e-08!169;UBERON:0006595!5.46e-08!169;UBERON:0000974!2.24e-07!10;UBERON:0000043!2.49e-07!3;UBERON:0007196!4.09e-07!14;UBERON:0001558!4.09e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.26e-29;3!UBERON:0003729;4.23e-18;13!UBERON:0000486;6.87e-13;12!UBERON:0003929;7.76e-13;7!UBERON:0003126;1.14e-12;7!UBERON:0001005;1.14e-12;7!UBERON:0000161;2.32e-12;19!UBERON:0000166;2.32e-12;19!UBERON:0000344;9.74e-12;20!UBERON:0003350;2.66e-11;8!UBERON:0001828;2.66e-11;8!UBERON:0000997;3.75e-11;1!UBERON:0005056;3.75e-11;1!UBERON:0004176;3.75e-11;1!UBERON:0004807;1.17e-10;22!UBERON:0000964;1.50e-10;4!UBERON:0010409;1.50e-10;4!UBERON:0003343;2.36e-10;4!UBERON:0004785;2.36e-10;4!UBERON:0007196;2.98e-10;15!UBERON:0001558;2.98e-10;15!UBERON:0000165;2.40e-08;28!UBERON:0005911;3.34e-08;36!UBERON:0001004;5.87e-08;65!UBERON:0010371;1.38e-07;31!UBERON:0000974;3.46e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001949;4.26e-29;3!UBERON:0003729;4.23e-18;13!UBERON:0000486;6.87e-13;12!UBERON:0003929;7.76e-13;7!UBERON:0003126;1.14e-12;7!UBERON:0001005;1.14e-12;7!UBERON:0000161;2.32e-12;19!UBERON:0000166;2.32e-12;19!UBERON:0000344;9.74e-12;20!UBERON:0003350;2.66e-11;8!UBERON:0001828;2.66e-11;8!UBERON:0000997;3.75e-11;1!UBERON:0005056;3.75e-11;1!UBERON:0004176;3.75e-11;1!UBERON:0004807;1.17e-10;22!UBERON:0000964;1.50e-10;4!UBERON:0010409;1.50e-10;4!UBERON:0003343;2.36e-10;4!UBERON:0004785;2.36e-10;4!UBERON:0007196;2.98e-10;15!UBERON:0001558;2.98e-10;15!UBERON:0000165;2.40e-08;28!UBERON:0005911;3.34e-08;36!UBERON:0001004;5.87e-08;65!UBERON:0010371;1.38e-07;31!UBERON:0000974;3.46e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.91e-29,3;UBERON:0003729,3.67e-18,13;UBERON:0003126,1.60e-12,7;UBERON:0001005,1.60e-12,7;UBERON:0000344,8.90e-12,20;UBERON:0003350,2.31e-11,8;UBERON:0001828,2.31e-11,8;UBERON:0000997,3.08e-11,1;UBERON:0005056,3.08e-11,1;UBERON:0001004,3.31e-11,74;UBERON:0000166,1.07e-10,22;UBERON:0000964,1.95e-10,4;UBERON:0010409,1.95e-10,4;UBERON:0004348,1.95e-10,4;UBERON:0005427,1.95e-10,4;UBERON:0003343,2.36e-10,4;UBERON:0004785,2.36e-10,4;UBERON:0007196,4.20e-10,15;UBERON:0001558,4.20e-10,15;UBERON:0001444,8.81e-09,49;UBERON:0004807,2.44e-08,28;UBERON:0003102,3.71e-08,99;UBERON:0000165,4.44e-08,29;UBERON:0000930,4.44e-08,29;UBERON:0000033,1.36e-07,56;UBERON:0000153,8.69e-07,62;UBERON:0007811,8.69e-07,62 | |||
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| ||
|short_description=p@chr10:79700488..79700501,- | |short_description=p@chr10:79700488..79700501,- | ||
}} | }} |
Latest revision as of 15:49, 23 July 2015
Short description: | p@chr10:79700488..79700501, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:79700488..79700501, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.91e-29 | 3 |
corneal epithelial cell | 6.54e-20 | 2 |
epithelial cell of alimentary canal | 8.90e-12 | 20 |
general ecto-epithelial cell | 4.17e-11 | 14 |
endo-epithelial cell | 2.67e-10 | 42 |
squamous epithelial cell | 1.04e-08 | 63 |
epithelial cell | 3.43e-08 | 253 |
endodermal cell | 2.92e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.91e-29 | 3 |
mouth mucosa | 3.67e-18 | 13 |
trachea | 1.60e-12 | 7 |
respiratory airway | 1.60e-12 | 7 |
mucosa | 8.90e-12 | 20 |
epithelium of mucosa | 2.31e-11 | 8 |
gingiva | 2.31e-11 | 8 |
mammalian vulva | 3.08e-11 | 1 |
external female genitalia | 3.08e-11 | 1 |
respiratory system | 3.31e-11 | 74 |
oral opening | 1.07e-10 | 22 |
cornea | 1.95e-10 | 4 |
eye surface | 1.95e-10 | 4 |
optic eminence | 1.95e-10 | 4 |
corneal primordium | 1.95e-10 | 4 |
mucosa of oral region | 2.36e-10 | 4 |
respiratory system mucosa | 2.36e-10 | 4 |
tracheobronchial tree | 4.20e-10 | 15 |
lower respiratory tract | 4.20e-10 | 15 |
subdivision of head | 8.81e-09 | 49 |
respiratory system epithelium | 2.44e-08 | 28 |
surface structure | 3.71e-08 | 99 |
mouth | 4.44e-08 | 29 |
stomodeum | 4.44e-08 | 29 |
head | 1.36e-07 | 56 |
anterior region of body | 8.69e-07 | 62 |
craniocervical region | 8.69e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.53e-11 | 1 |
keratoacanthoma | 2.53e-11 | 1 |
squamous cell carcinoma | 3.46e-11 | 14 |