FFCP PHASE1:Hg19::chr4:48082128..48082139,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7294 | |EntrezGene=7294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12434 | |HGNC=12434 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_uc010igj.2_5end | |association_with_transcript=5bp_to_uc010igj.2_5end | ||
|cluster_id=chr4:48082128..48082139,- | |||
|description=CAGE_peak_5_at_TXK_5end | |description=CAGE_peak_5_at_TXK_5end | ||
|id=chr4:48082128..48082139,- | |id=chr4:48082128..48082139,- | ||
|ontology_enrichment_celltype=CL:1000306!1.53e-07!4;CL:0002547!1.53e-07!4 | |ontology_enrichment_celltype=CL:1000306!1.53e-07!4;CL:0002547!1.53e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000306;2.26e-08;4!CL:0002222;2.26e-08;4!CL:1000306;2.26e-08;4!CL:0002547;2.26e-08;4!CL:0002224;2.26e-08;4!CL:0002594;2.26e-08;4 | |ontology_enrichment_celltype_v019=CL:0000306;2.26e-08;4!CL:0002222;2.26e-08;4!CL:1000306;2.26e-08;4!CL:0002547;2.26e-08;4!CL:0002224;2.26e-08;4!CL:0002594;2.26e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.26e-08,4;CL:0002222,2.26e-08,4;CL:0002224,2.26e-08,4;CL:0002594,2.43e-08,4;CL:1000306,2.61e-08,4;CL:0002547,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1 | |ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1 | ||
|ontology_enrichment_disease=DOID:305!3.29e-07!106;DOID:4929!9.83e-07!2 | |ontology_enrichment_disease=DOID:305!3.29e-07!106;DOID:4929!9.83e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!1.53e-07!4;UBERON:0007240!1.53e-07!4;UBERON:0005742!1.53e-07!4;UBERON:0005734!1.53e-07!4;UBERON:0004664!1.53e-07!4;UBERON:0004663!1.53e-07!4 | |ontology_enrichment_uberon=UBERON:0000415!1.53e-07!4;UBERON:0007240!1.53e-07!4;UBERON:0005742!1.53e-07!4;UBERON:0005734!1.53e-07!4;UBERON:0004664!1.53e-07!4;UBERON:0004663!1.53e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.70e-08;4!UBERON:0002394;2.26e-08;4!UBERON:0010077;2.26e-08;4!UBERON:0005389;2.26e-08;4!UBERON:0000484;2.26e-08;4!UBERON:0003928;2.26e-08;4!UBERON:0004797;2.26e-08;4!UBERON:0000415;2.26e-08;4!UBERON:0007240;2.26e-08;4!UBERON:0005742;2.26e-08;4!UBERON:0005734;2.26e-08;4!UBERON:0000965;2.26e-08;4!UBERON:0001803;2.26e-08;4!UBERON:0004664;2.26e-08;4!UBERON:0001310;2.26e-08;4!UBERON:0004663;2.26e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0001987;1.70e-08;4!UBERON:0002394;2.26e-08;4!UBERON:0010077;2.26e-08;4!UBERON:0005389;2.26e-08;4!UBERON:0000484;2.26e-08;4!UBERON:0003928;2.26e-08;4!UBERON:0004797;2.26e-08;4!UBERON:0000415;2.26e-08;4!UBERON:0007240;2.26e-08;4!UBERON:0005742;2.26e-08;4!UBERON:0005734;2.26e-08;4!UBERON:0000965;2.26e-08;4!UBERON:0001803;2.26e-08;4!UBERON:0004664;2.26e-08;4!UBERON:0001310;2.26e-08;4!UBERON:0004663;2.26e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4;UBERON:0010077,2.26e-08,4;UBERON:0005389,2.26e-08,4;UBERON:0000484,2.26e-08,4;UBERON:0002546,2.26e-08,4;UBERON:0000965,2.26e-08,4;UBERON:0001803,2.26e-08,4;UBERON:0003073,2.26e-08,4;UBERON:0005426,2.26e-08,4;UBERON:0001310,2.43e-08,4;UBERON:0000415,2.61e-08,4;UBERON:0007240,2.61e-08,4;UBERON:0005742,2.61e-08,4;UBERON:0005734,2.61e-08,4;UBERON:0004664,2.61e-08,4;UBERON:0004663,2.61e-08,4 | |||
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| ||
|short_description=p5@TXK | |short_description=p5@TXK | ||
}} | }} |
Latest revision as of 22:23, 17 September 2015
Short description: | p5@TXK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TXK_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_uc010igj.2_5end |
EntrezGene: | TXK |
HGNC: | 12434 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.26e-08 | 4 |
vertebrate lens cell | 2.26e-08 | 4 |
lens epithelial cell | 2.26e-08 | 4 |
smooth muscle cell of the umbilical artery | 2.43e-08 | 4 |
fibroblast of tunica adventitia of artery | 2.61e-08 | 4 |
fibroblast of the aortic adventitia | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |
cuboidal epithelium | 2.26e-08 | 4 |
transparent eye structure | 2.26e-08 | 4 |
simple cuboidal epithelium | 2.26e-08 | 4 |
cranial placode | 2.26e-08 | 4 |
lens of camera-type eye | 2.26e-08 | 4 |
epithelium of lens | 2.26e-08 | 4 |
lens placode | 2.26e-08 | 4 |
lens vesicle | 2.26e-08 | 4 |
umbilical artery | 2.43e-08 | 4 |
artery wall | 2.61e-08 | 4 |
tunica adventitia of artery | 2.61e-08 | 4 |
adventitia | 2.61e-08 | 4 |
tunica adventitia of blood vessel | 2.61e-08 | 4 |
aorta tunica adventitia | 2.61e-08 | 4 |
aorta wall | 2.61e-08 | 4 |