FFCP PHASE1:Hg19::chr17:79826116..79826136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=362bp_to_BC007630_5end | |association_with_transcript=362bp_to_BC007630_5end | ||
|cluster_id=chr17:79826116..79826136,- | |||
|coexpression_cluster_id=C2444 | |coexpression_cluster_id=C2444 | ||
|description=CAGE_peak_6_at_ARHGDIA_5end | |description=CAGE_peak_6_at_ARHGDIA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002371!4.50e-15!591;CL:0000144!2.99e-14!625;CL:0000548!2.13e-12!679;CL:0000004!2.13e-12!679;CL:0000255!2.13e-12!679;CL:0000055!3.91e-12!180;CL:0000012!2.27e-11!682;CL:0000220!1.97e-09!246;CL:0002321!3.10e-09!248;CL:0000057!6.23e-09!75;CL:0000222!1.26e-08!119;CL:0000003!1.41e-08!722;CL:0000723!1.69e-08!436;CL:0000048!8.20e-08!430;CL:0000034!1.05e-07!444;CL:0000063!7.53e-07!578 | |ontology_enrichment_celltype=CL:0002371!4.50e-15!591;CL:0000144!2.99e-14!625;CL:0000548!2.13e-12!679;CL:0000004!2.13e-12!679;CL:0000255!2.13e-12!679;CL:0000055!3.91e-12!180;CL:0000012!2.27e-11!682;CL:0000220!1.97e-09!246;CL:0002321!3.10e-09!248;CL:0000057!6.23e-09!75;CL:0000222!1.26e-08!119;CL:0000003!1.41e-08!722;CL:0000723!1.69e-08!436;CL:0000048!8.20e-08!430;CL:0000034!1.05e-07!444;CL:0000063!7.53e-07!578 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.50e-09,433;CL:0000034,6.54e-09,441;CL:0000222,6.63e-09,121;CL:0002321,7.16e-09,250;CL:0000048,8.60e-09,427;CL:0000057,1.91e-08,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.27e-08,315;UBERON:0004120,2.27e-08,315;UBERON:0006603,2.27e-08,315;UBERON:0007503,6.88e-08,78 | |||
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| ||
|short_description=p6@ARHGDIA | |short_description=p6@ARHGDIA | ||
}} | }} |
Latest revision as of 08:53, 18 September 2015
Short description: | p6@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGDIA_5end |
Coexpression cluster: | C2444_Alveolar_Endothelial_Smooth_leiomyoma_Preadipocyte_Hair_Renal |
Association with transcript: | 362bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.50e-09 | 433 |
stem cell | 6.54e-09 | 441 |
mesodermal cell | 6.63e-09 | 121 |
embryonic cell | 7.16e-09 | 250 |
multi fate stem cell | 8.60e-09 | 427 |
fibroblast | 1.91e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.27e-08 | 315 |
mesoderm-derived structure | 2.27e-08 | 315 |
presumptive mesoderm | 2.27e-08 | 315 |
epithelial vesicle | 6.88e-08 | 78 |