FFCP PHASE1:Hg19::chr7:65540799..65540829,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=435 | |EntrezGene=435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=746 | |HGNC=746 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000487982,ENST00000496336_5end | |association_with_transcript=0bp_to_ENST00000487982,ENST00000496336_5end | ||
|cluster_id=chr7:65540799..65540829,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_ASL_5end | |description=CAGE_peak_1_at_ASL_5end | ||
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|ontology_enrichment_celltype=CL:0000548!6.65e-21!679;CL:0000004!6.65e-21!679;CL:0000255!6.65e-21!679;CL:0002371!9.88e-21!591;CL:0000012!1.14e-20!682;CL:0000144!4.51e-20!625;CL:0000055!7.34e-14!180;CL:0000003!1.02e-12!722;CL:0000183!3.92e-11!59;CL:0000222!5.44e-11!119;CL:0000192!1.37e-10!42;CL:0000514!1.37e-10!42;CL:0000680!1.59e-10!57;CL:0000056!1.59e-10!57;CL:0000355!1.59e-10!57;CL:0002321!1.68e-10!248;CL:0000220!1.89e-10!246;CL:0000187!3.26e-10!54;CL:0000048!3.35e-10!430;CL:0000359!1.10e-09!32;CL:0000723!1.14e-09!436;CL:0000034!2.33e-09!444;CL:0000057!3.68e-09!75;CL:0000063!8.43e-09!578;CL:0000393!1.16e-08!60;CL:0000211!1.16e-08!60 | |ontology_enrichment_celltype=CL:0000548!6.65e-21!679;CL:0000004!6.65e-21!679;CL:0000255!6.65e-21!679;CL:0002371!9.88e-21!591;CL:0000012!1.14e-20!682;CL:0000144!4.51e-20!625;CL:0000055!7.34e-14!180;CL:0000003!1.02e-12!722;CL:0000183!3.92e-11!59;CL:0000222!5.44e-11!119;CL:0000192!1.37e-10!42;CL:0000514!1.37e-10!42;CL:0000680!1.59e-10!57;CL:0000056!1.59e-10!57;CL:0000355!1.59e-10!57;CL:0002321!1.68e-10!248;CL:0000220!1.89e-10!246;CL:0000187!3.26e-10!54;CL:0000048!3.35e-10!430;CL:0000359!1.10e-09!32;CL:0000723!1.14e-09!436;CL:0000034!2.33e-09!444;CL:0000057!3.68e-09!75;CL:0000063!8.43e-09!578;CL:0000393!1.16e-08!60;CL:0000211!1.16e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.59e-09;32!CL:0000192;8.78e-08;43 | |ontology_enrichment_celltype_v019=CL:0000359;4.59e-09;32!CL:0000192;8.78e-08;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.06e-11,121;CL:0002321,9.71e-11,250;CL:0000048,1.70e-10,427;CL:0000192,2.40e-10,43;CL:0000514,2.40e-10,43;CL:0000680,2.42e-10,58;CL:0000056,2.42e-10,58;CL:0000355,2.42e-10,58;CL:0000187,5.02e-10,55;CL:0000723,5.93e-10,433;CL:0000359,1.10e-09,32;CL:0000034,1.23e-09,441;CL:0000057,9.79e-09,76;CL:0000393,1.61e-08,61;CL:0000211,1.61e-08,61;CL:0000115,9.27e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;8.78e-08;43 | |ontology_enrichment_development_v019=CL:0000514;8.78e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.40e-18!118;UBERON:0001637!3.88e-14!42;UBERON:0003509!3.88e-14!42;UBERON:0004572!3.88e-14!42;UBERON:0005256!2.36e-13!143;UBERON:0000926!1.11e-12!448;UBERON:0004120!1.11e-12!448;UBERON:0006603!1.11e-12!448;UBERON:0001981!1.18e-12!60;UBERON:0007500!1.18e-12!60;UBERON:0004537!1.18e-12!60;UBERON:0006965!1.18e-12!60;UBERON:0000055!4.98e-12!69;UBERON:0004872!6.10e-12!84;UBERON:0000490!1.47e-11!138;UBERON:0000486!1.55e-11!82;UBERON:0002100!1.89e-11!216;UBERON:0002049!3.47e-11!79;UBERON:0007798!3.47e-11!79;UBERON:0004290!1.31e-10!70;UBERON:0004573!2.87e-10!33;UBERON:0004571!2.87e-10!33;UBERON:0000914!3.74e-10!83;UBERON:0002329!3.74e-10!83;UBERON:0003077!3.74e-10!83;UBERON:0003059!3.74e-10!83;UBERON:0007282!3.74e-10!83;UBERON:0009618!3.74e-10!83;UBERON:0007285!3.74e-10!83;UBERON:0003081!4.70e-10!216;UBERON:0001134!3.94e-08!61;UBERON:0002036!3.94e-08!61;UBERON:0003082!3.94e-08!61;UBERON:0004535!5.72e-08!110;UBERON:0002385!6.72e-08!63;UBERON:0001015!6.72e-08!63;UBERON:0000383!6.72e-08!63;UBERON:0003104!7.66e-08!238;UBERON:0009142!7.66e-08!238;UBERON:0000467!1.53e-07!625;UBERON:0000480!2.32e-07!626;UBERON:0002204!3.76e-07!167;UBERON:0001009!4.68e-07!113;UBERON:0000468!6.72e-07!659 | |ontology_enrichment_uberon=UBERON:0003914!2.40e-18!118;UBERON:0001637!3.88e-14!42;UBERON:0003509!3.88e-14!42;UBERON:0004572!3.88e-14!42;UBERON:0005256!2.36e-13!143;UBERON:0000926!1.11e-12!448;UBERON:0004120!1.11e-12!448;UBERON:0006603!1.11e-12!448;UBERON:0001981!1.18e-12!60;UBERON:0007500!1.18e-12!60;UBERON:0004537!1.18e-12!60;UBERON:0006965!1.18e-12!60;UBERON:0000055!4.98e-12!69;UBERON:0004872!6.10e-12!84;UBERON:0000490!1.47e-11!138;UBERON:0000486!1.55e-11!82;UBERON:0002100!1.89e-11!216;UBERON:0002049!3.47e-11!79;UBERON:0007798!3.47e-11!79;UBERON:0004290!1.31e-10!70;UBERON:0004573!2.87e-10!33;UBERON:0004571!2.87e-10!33;UBERON:0000914!3.74e-10!83;UBERON:0002329!3.74e-10!83;UBERON:0003077!3.74e-10!83;UBERON:0003059!3.74e-10!83;UBERON:0007282!3.74e-10!83;UBERON:0009618!3.74e-10!83;UBERON:0007285!3.74e-10!83;UBERON:0003081!4.70e-10!216;UBERON:0001134!3.94e-08!61;UBERON:0002036!3.94e-08!61;UBERON:0003082!3.94e-08!61;UBERON:0004535!5.72e-08!110;UBERON:0002385!6.72e-08!63;UBERON:0001015!6.72e-08!63;UBERON:0000383!6.72e-08!63;UBERON:0003104!7.66e-08!238;UBERON:0009142!7.66e-08!238;UBERON:0000467!1.53e-07!625;UBERON:0000480!2.32e-07!626;UBERON:0002204!3.76e-07!167;UBERON:0001009!4.68e-07!113;UBERON:0000468!6.72e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.05e-10;42!UBERON:0003509;5.05e-10;42!UBERON:0004572;5.05e-10;42!UBERON:0004573;3.68e-09;33!UBERON:0004571;3.68e-09;33!UBERON:0007500;7.72e-09;56!UBERON:0001981;7.72e-09;56!UBERON:0004537;7.72e-09;56!UBERON:0003914;1.21e-08;74 | |ontology_enrichment_uberon_v019=UBERON:0001637;5.05e-10;42!UBERON:0003509;5.05e-10;42!UBERON:0004572;5.05e-10;42!UBERON:0004573;3.68e-09;33!UBERON:0004571;3.68e-09;33!UBERON:0007500;7.72e-09;56!UBERON:0001981;7.72e-09;56!UBERON:0004537;7.72e-09;56!UBERON:0003914;1.21e-08;74 | ||
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| ||
|short_description=p1@ASL | |short_description=p1@ASL | ||
}} | }} |
Latest revision as of 05:50, 19 September 2015
Short description: | p1@ASL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ASL_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000487982, ENST00000496336_5end |
EntrezGene: | ASL |
HGNC: | 746 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.06e-11 | 121 |
embryonic cell | 9.71e-11 | 250 |
multi fate stem cell | 1.70e-10 | 427 |
smooth muscle cell | 2.40e-10 | 43 |
smooth muscle myoblast | 2.40e-10 | 43 |
muscle precursor cell | 2.42e-10 | 58 |
myoblast | 2.42e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.42e-10 | 58 |
muscle cell | 5.02e-10 | 55 |
somatic stem cell | 5.93e-10 | 433 |
vascular associated smooth muscle cell | 1.10e-09 | 32 |
stem cell | 1.23e-09 | 441 |
fibroblast | 9.79e-09 | 76 |
electrically responsive cell | 1.61e-08 | 61 |
electrically active cell | 1.61e-08 | 61 |
endothelial cell | 9.27e-07 | 36 |