FFCP PHASE1:Hg19::chr16:68678892..68678897,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1001 | |EntrezGene=1001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1762 | |HGNC=1762 | ||
|TSSclassifier=strong | |||
|UniProt=P22223 | |UniProt=P22223 | ||
|association_with_transcript=153bp_to_ENST00000264012_5end | |association_with_transcript=153bp_to_ENST00000264012_5end | ||
|cluster_id=chr16:68678892..68678897,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_12_at_CDH3_5end | |description=CAGE_peak_12_at_CDH3_5end | ||
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|ontology_enrichment_celltype=CL:0000148!6.59e-52!10;CL:0000541!6.59e-52!10;CL:0000147!6.09e-37!14;CL:0002567!4.33e-33!3;CL:0000710!1.07e-25!20;CL:0002077!7.62e-20!33;CL:0000075!7.00e-19!27;CL:0000325!7.15e-13!39;CL:0002566!3.27e-12!1;CL:0000333!1.30e-11!41;CL:0000221!1.84e-08!71;CL:0000133!5.61e-08!59 | |ontology_enrichment_celltype=CL:0000148!6.59e-52!10;CL:0000541!6.59e-52!10;CL:0000147!6.09e-37!14;CL:0002567!4.33e-33!3;CL:0000710!1.07e-25!20;CL:0002077!7.62e-20!33;CL:0000075!7.00e-19!27;CL:0000325!7.15e-13!39;CL:0002566!3.27e-12!1;CL:0000333!1.30e-11!41;CL:0000221!1.84e-08!71;CL:0000133!5.61e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002567;3.48e-118;3!CL:0000148;2.84e-98;10!CL:0000147;1.65e-70;14!CL:0000710;1.16e-49;20!CL:0002566;2.21e-40;1!CL:0000075;4.92e-37;27!CL:0002077;1.39e-27;34!CL:0000149;3.42e-11;4 | |ontology_enrichment_celltype_v019=CL:0002567;3.48e-118;3!CL:0000148;2.84e-98;10!CL:0000147;1.65e-70;14!CL:0000710;1.16e-49;20!CL:0002566;2.21e-40;1!CL:0000075;4.92e-37;27!CL:0002077;1.39e-27;34!CL:0000149;3.42e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,5.20e-118,3;CL:0000148,2.85e-98,10;CL:0000541,2.85e-98,10;CL:0000147,1.65e-70,14;CL:0000710,1.16e-49,20;CL:0002566,1.48e-40,1;CL:0000075,4.92e-37,27;CL:0002077,1.36e-29,34;CL:0000333,1.42e-23,41;CL:0000133,7.61e-17,59;CL:0000221,5.20e-14,72;CL:0000149,3.42e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000133;4.68e-11;59!CL:0000221;2.60e-07;72 | |ontology_enrichment_development_v019=CL:0000133;4.68e-11;59!CL:0000221;2.60e-07;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.23e-14!3;UBERON:0004854!1.23e-14!3;UBERON:0009034!1.23e-14!3;UBERON:0002095!1.23e-14!3;UBERON:0004782!1.23e-14!3;UBERON:0003281!1.23e-14!3;UBERON:0009664!1.23e-14!3;UBERON:0002296!1.23e-14!3;UBERON:0005602!1.23e-14!3;UBERON:0001179!1.23e-14!3;UBERON:0006293!1.23e-14!3;UBERON:0000989!5.05e-12!1;UBERON:0008811!5.05e-12!1;UBERON:0006258!5.05e-12!1;UBERON:0005876!5.05e-12!1;UBERON:0004874!5.05e-12!1;UBERON:0002363!1.81e-11!1;UBERON:0007647!1.81e-11!1;UBERON:0010115!1.81e-11!1;UBERON:0004177!8.84e-07!7 | |ontology_enrichment_uberon=UBERON:0002106!1.23e-14!3;UBERON:0004854!1.23e-14!3;UBERON:0009034!1.23e-14!3;UBERON:0002095!1.23e-14!3;UBERON:0004782!1.23e-14!3;UBERON:0003281!1.23e-14!3;UBERON:0009664!1.23e-14!3;UBERON:0002296!1.23e-14!3;UBERON:0005602!1.23e-14!3;UBERON:0001179!1.23e-14!3;UBERON:0006293!1.23e-14!3;UBERON:0000989!5.05e-12!1;UBERON:0008811!5.05e-12!1;UBERON:0006258!5.05e-12!1;UBERON:0005876!5.05e-12!1;UBERON:0004874!5.05e-12!1;UBERON:0002363!1.81e-11!1;UBERON:0007647!1.81e-11!1;UBERON:0010115!1.81e-11!1;UBERON:0004177!8.84e-07!7 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p12@CDH3 | |short_description=p12@CDH3 | ||
}} | }} |
Latest revision as of 13:57, 17 September 2015
Short description: | p12@CDH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CDH3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 153bp_to_ENST00000264012_5end |
EntrezGene: | CDH3 |
HGNC: | 1762 |
UniProt: | P22223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 5.20e-118 | 3 |
melanocyte | 2.85e-98 | 10 |
melanoblast | 2.85e-98 | 10 |
pigment cell | 1.65e-70 | 14 |
neurecto-epithelial cell | 1.16e-49 | 20 |
dark melanocyte | 1.48e-40 | 1 |
columnar/cuboidal epithelial cell | 4.92e-37 | 27 |
ecto-epithelial cell | 1.36e-29 | 34 |
migratory neural crest cell | 1.42e-23 | 41 |
neurectodermal cell | 7.61e-17 | 59 |
ectodermal cell | 5.20e-14 | 72 |
visual pigment cell | 3.42e-11 | 4 |