FFCP PHASE1:Hg19::chr10:29811664..29811673,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_uc010qdw.1_5end | |association_with_transcript=-100bp_to_uc010qdw.1_5end | ||
|cluster_id=chr10:29811664..29811673,- | |||
|coexpression_cluster_id=C610 | |coexpression_cluster_id=C610 | ||
|description=CAGE_peak_33_at_SVIL_5end | |description=CAGE_peak_33_at_SVIL_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000710!4.06e-27!20;CL:0000148!1.20e-23!10;CL:0000541!1.20e-23!10;CL:0000075!3.50e-23!27;CL:0000147!1.31e-16!14;CL:0002077!1.51e-15!33;CL:0000133!1.61e-10!59;CL:0000221!2.38e-08!71;CL:0002567!9.74e-08!3;CL:0000333!1.14e-07!41;CL:0002590!2.25e-07!3;CL:0000064!6.88e-07!3;CL:0005012!6.88e-07!3;CL:0000067!6.88e-07!3;CL:0002304!6.88e-07!3;CL:0000325!7.80e-07!39 | |ontology_enrichment_celltype=CL:0000710!4.06e-27!20;CL:0000148!1.20e-23!10;CL:0000541!1.20e-23!10;CL:0000075!3.50e-23!27;CL:0000147!1.31e-16!14;CL:0002077!1.51e-15!33;CL:0000133!1.61e-10!59;CL:0000221!2.38e-08!71;CL:0002567!9.74e-08!3;CL:0000333!1.14e-07!41;CL:0002590!2.25e-07!3;CL:0000064!6.88e-07!3;CL:0005012!6.88e-07!3;CL:0000067!6.88e-07!3;CL:0002304!6.88e-07!3;CL:0000325!7.80e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.65e-82;10!CL:0000147;1.04e-58;14!CL:0002567;1.91e-44;3!CL:0000710;2.45e-41;20!CL:0000075;8.28e-31;27!CL:0002077;3.62e-23;34!CL:0000149;1.50e-09;4 | |ontology_enrichment_celltype_v019=CL:0000148;7.65e-82;10!CL:0000147;1.04e-58;14!CL:0002567;1.91e-44;3!CL:0000710;2.45e-41;20!CL:0000075;8.28e-31;27!CL:0002077;3.62e-23;34!CL:0000149;1.50e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.32e-82,10;CL:0000541,8.32e-82,10;CL:0000147,1.10e-58,14;CL:0002567,1.91e-44,3;CL:0000710,2.56e-41,20;CL:0000075,8.55e-31,27;CL:0002077,1.36e-24,34;CL:0000333,1.42e-19,41;CL:0000133,5.87e-14,59;CL:0000221,1.37e-11,72;CL:0000149,1.44e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000133;4.15e-08;59!CL:0000221;1.39e-07;72 | |ontology_enrichment_development_v019=CL:0000133;4.15e-08;59!CL:0000221;1.39e-07;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.96e-18;2 | |ontology_enrichment_disease_v019=DOID:1909;5.96e-18;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,5.48e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0006947!1.63e-07!3;UBERON:0004054!1.63e-07!3;UBERON:0002200!6.47e-07!11;UBERON:0006876!6.47e-07!11;UBERON:0001778!6.88e-07!3;UBERON:0001775!6.88e-07!3 | |ontology_enrichment_uberon=UBERON:0006947!1.63e-07!3;UBERON:0004054!1.63e-07!3;UBERON:0002200!6.47e-07!11;UBERON:0006876!6.47e-07!11;UBERON:0001778!6.88e-07!3;UBERON:0001775!6.88e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p33@SVIL | |short_description=p33@SVIL | ||
}} | }} |
Latest revision as of 20:53, 17 September 2015
Short description: | p33@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_SVIL_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | -100bp_to_uc010qdw.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.32e-82 | 10 |
melanoblast | 8.32e-82 | 10 |
pigment cell | 1.10e-58 | 14 |
light melanocyte | 1.91e-44 | 3 |
neurecto-epithelial cell | 2.56e-41 | 20 |
columnar/cuboidal epithelial cell | 8.55e-31 | 27 |
ecto-epithelial cell | 1.36e-24 | 34 |
migratory neural crest cell | 1.42e-19 | 41 |
neurectodermal cell | 5.87e-14 | 59 |
ectodermal cell | 1.37e-11 | 72 |
visual pigment cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.48e-18 | 2 |