FFCP PHASE1:Hg19::chr12:4409319..4409336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:4409319..4409336,- | |||
|coexpression_cluster_id=C539 | |coexpression_cluster_id=C539 | ||
|description=CAGE_peak_at_chr12:4409319..4409336,- | |description=CAGE_peak_at_chr12:4409319..4409336,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;3.67e-23;1!CL:0000819;3.67e-23;1!CL:0002577;8.63e-09;3!CL:0002231;9.66e-09;3!CL:0002144;1.26e-08;3 | |ontology_enrichment_celltype_v019=CL:0000785;3.67e-23;1!CL:0000819;3.67e-23;1!CL:0002577;8.63e-09;3!CL:0002231;9.66e-09;3!CL:0002144;1.26e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,3.28e-23,1;CL:0000785,2.59e-12,2;CL:0000955,2.59e-12,2;CL:0000818,2.59e-12,2;CL:0000954,2.59e-12,2;CL:0000816,2.59e-12,2;CL:0002577,8.96e-09,3;CL:0002231,9.66e-09,3;CL:0000817,1.21e-08,3;CL:0002144,1.30e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000954;2.74e-12;2 | |ontology_enrichment_development_v019=CL:0000954;2.74e-12;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.67e-23;1!DOID:0060073;3.67e-23;1!DOID:0060061;3.67e-23;1!DOID:8675;3.67e-23;1!DOID:8691;3.67e-23;1!DOID:0060058;9.65e-10;10 | |ontology_enrichment_disease_v019=DOID:0060060;3.67e-23;1!DOID:0060073;3.67e-23;1!DOID:0060061;3.67e-23;1!DOID:8675;3.67e-23;1!DOID:8691;3.67e-23;1!DOID:0060058;9.65e-10;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.28e-23,1;DOID:8675,3.28e-23,1;DOID:0060060,5.13e-23,1;DOID:0060061,5.13e-23,1;DOID:8691,5.13e-23,1;DOID:0060058,1.01e-09,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.26e-08;3!UBERON:0001915;1.26e-08;3!UBERON:0001982;1.26e-08;3!UBERON:0001987;6.68e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0010523;1.26e-08;3!UBERON:0001915;1.26e-08;3!UBERON:0001982;1.26e-08;3!UBERON:0001987;6.68e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.30e-08,3;UBERON:0001915,1.30e-08,3;UBERON:0001982,1.30e-08,3;UBERON:0001987,6.87e-07,4;UBERON:0004340,6.87e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0.85870796139317,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,1.04047478047903,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0,0,1.22031028774085,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,1.75600456653801,0,0.301586917234893,0.555530670951178,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.53735113621709,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,0.479249710983165,0,0,0,0,0,0.336255431980582,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.606255142892519,3.32870879020994,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00506470303285,0.276242966807689,0.114814448164607,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.330569830721956,0.384380134730212,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0.344743373241465,0,0,0,0,0,0,0.591095237907095,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0.370691816839509,0.835375596043643,0,0,0,1.27718352450966,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,1.7785046870815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,1.19992437512958,0,0.344429959321631,0,0,0.139879507719444,0,0,0,0,0,0.33946505990805,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.299823467774787,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0.436350690340377,0,0,0,0,0.378499274505237,0,3.4208595273088,0.101988829741982,0.534434810531121,0.0918948995348449,0.250707539292375,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0.961705476909699 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0.85870796139317,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,1.04047478047903,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0,0,1.22031028774085,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,1.75600456653801,0,0.301586917234893,0.555530670951178,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.53735113621709,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,0.479249710983165,0,0,0,0,0,0.336255431980582,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.606255142892519,3.32870879020994,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00506470303285,0.276242966807689,0.114814448164607,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.330569830721956,0.384380134730212,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0.344743373241465,0,0,0,0,0,0,0.591095237907095,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0.370691816839509,0.835375596043643,0,0,0,1.27718352450966,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,1.7785046870815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,1.19992437512958,0,0.344429959321631,0,0,0.139879507719444,0,0,0,0,0,0.33946505990805,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.299823467774787,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0.436350690340377,0,0,0,0,0.378499274505237,0,3.4208595273088,0.101988829741982,0.534434810531121,0.0918948995348449,0.250707539292375,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0.961705476909699 | ||
|short_description=p@chr12:4409319..4409336,- | |short_description=p@chr12:4409319..4409336,- | ||
}} | }} |
Latest revision as of 08:30, 24 July 2015
Short description: | p@chr12:4409319..4409336, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4409319..4409336, - |
Coexpression cluster: | C539_teratocarcinoma_diffuse_Gingival_Placental_lymphangiectasia_mycosis_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 3.28e-23 | 1 |
mature B cell | 2.59e-12 | 2 |
pre-B-II cell | 2.59e-12 | 2 |
transitional stage B cell | 2.59e-12 | 2 |
small pre-B-II cell | 2.59e-12 | 2 |
immature B cell | 2.59e-12 | 2 |
placental epithelial cell | 8.96e-09 | 3 |
epithelial cell of prostate | 9.66e-09 | 3 |
precursor B cell | 1.21e-08 | 3 |
capillary endothelial cell | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 1.30e-08 | 3 |
endothelium of capillary | 1.30e-08 | 3 |
capillary | 1.30e-08 | 3 |
placenta | 6.87e-07 | 4 |
allantois | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.28e-23 | 1 |
lymphosarcoma | 3.28e-23 | 1 |
non-Hodgkin lymphoma | 5.13e-23 | 1 |
cutaneous T cell lymphoma | 5.13e-23 | 1 |
mycosis fungoides | 5.13e-23 | 1 |
lymphoma | 1.01e-09 | 10 |