FFCP PHASE1:Hg19::chr22:38539430..38539442,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8398 | |EntrezGene=8398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9039 | |HGNC=9039 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_ENST00000498338_5end | |association_with_transcript=58bp_to_ENST00000498338_5end | ||
|cluster_id=chr22:38539430..38539442,- | |||
|coexpression_cluster_id=C4100 | |coexpression_cluster_id=C4100 | ||
|description=CAGE_peak_10_at_PLA2G6_5end | |description=CAGE_peak_10_at_PLA2G6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000767!1.44e-14!3;CL:0000763!1.45e-14!112;CL:0000049!1.45e-14!112;CL:0002150!3.41e-14!3;CL:0000861!3.41e-14!3;CL:0000037!5.54e-13!172;CL:0000566!5.54e-13!172;CL:0000988!6.15e-12!182;CL:0002032!2.60e-10!165;CL:0000837!2.60e-10!165;CL:0002274!6.71e-09!5;CL:0000457!6.71e-09!5;CL:0002191!6.71e-09!5;CL:0000097!6.71e-09!5;CL:0000831!6.71e-09!5;CL:0002028!6.71e-09!5;CL:0000842!9.92e-07!3 | |ontology_enrichment_celltype=CL:0000767!1.44e-14!3;CL:0000763!1.45e-14!112;CL:0000049!1.45e-14!112;CL:0002150!3.41e-14!3;CL:0000861!3.41e-14!3;CL:0000037!5.54e-13!172;CL:0000566!5.54e-13!172;CL:0000988!6.15e-12!182;CL:0002032!2.60e-10!165;CL:0000837!2.60e-10!165;CL:0002274!6.71e-09!5;CL:0000457!6.71e-09!5;CL:0002191!6.71e-09!5;CL:0000097!6.71e-09!5;CL:0000831!6.71e-09!5;CL:0002028!6.71e-09!5;CL:0000842!9.92e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000767;5.36e-08;3!CL:0000763;5.66e-07;100 | |ontology_enrichment_celltype_v019=CL:0000767;5.36e-08;3!CL:0000763;5.66e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.01e-08,108;CL:0000049,1.01e-08,108;CL:0000767,5.54e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!1.39e-22!31;DOID:1240!2.36e-17!39;DOID:1036!5.83e-14!8;DOID:2531!1.34e-12!51;DOID:0060083!1.34e-12!51 | |ontology_enrichment_disease=DOID:8692!1.39e-22!31;DOID:1240!2.36e-17!39;DOID:1036!5.83e-14!8;DOID:2531!1.34e-12!51;DOID:0060083!1.34e-12!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.48e-23;31!DOID:8552;2.54e-21;1!DOID:9119;4.22e-21;1!DOID:1240;5.53e-13;39!DOID:2531;1.23e-10;51!DOID:0060083;1.23e-10;51 | |ontology_enrichment_disease_v019=DOID:8692;4.48e-23;31!DOID:8552;2.54e-21;1!DOID:9119;4.22e-21;1!DOID:1240;5.53e-13;39!DOID:2531;1.23e-10;51!DOID:0060083;1.23e-10;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,4.98e-23,31;DOID:8552,2.30e-21,1;DOID:9119,3.45e-21,1;DOID:1240,2.58e-18,39;DOID:2531,5.29e-14,51;DOID:0060083,5.29e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.30e-09!2 | |ontology_enrichment_uberon=UBERON:0003127!1.30e-09!2 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p10@PLA2G6 | |short_description=p10@PLA2G6 | ||
}} | }} |
Latest revision as of 07:24, 20 September 2015
Short description: | p10@PLA2G6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PLA2G6_5end |
Coexpression cluster: | C4100_chronic_Basophils_acute_Natural_Whole_CD34_leukemia |
Association with transcript: | 58bp_to_ENST00000498338_5end |
EntrezGene: | PLA2G6 |
HGNC: | 9039 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.01e-08 | 108 |
common myeloid progenitor | 1.01e-08 | 108 |
basophil | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.98e-23 | 31 |
chronic myeloid leukemia | 2.30e-21 | 1 |
acute myeloid leukemia | 3.45e-21 | 1 |
leukemia | 2.58e-18 | 39 |
hematologic cancer | 5.29e-14 | 51 |
immune system cancer | 5.29e-14 | 51 |