FFCP PHASE1:Hg19::chr8:27850157..27850179,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286133 | |EntrezGene=286133 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28701 | |HGNC=28701 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000380385_5end | |association_with_transcript=1bp_to_ENST00000380385_5end | ||
|cluster_id=chr8:27850157..27850179,- | |||
|coexpression_cluster_id=C2924 | |coexpression_cluster_id=C2924 | ||
|description=CAGE_peak_2_at_SCARA5_5end | |description=CAGE_peak_2_at_SCARA5_5end | ||
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|ontology_enrichment_celltype=CL:0000136!9.49e-11!15;CL:0000153!3.65e-07!9;CL:0000447!3.65e-07!9 | |ontology_enrichment_celltype=CL:0000136!9.49e-11!15;CL:0000153!3.65e-07!9;CL:0000447!3.65e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.87e-09;13!CL:0000153;4.80e-07;9!CL:0000447;4.80e-07;9!CL:0000214;6.62e-07;3 | |ontology_enrichment_celltype_v019=CL:0000136;5.87e-09;13!CL:0000153;4.80e-07;9!CL:0000447;4.80e-07;9!CL:0000214;6.62e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.66e-07,15;CL:0000153,6.26e-07,9;CL:0000447,6.26e-07,9;CL:0000214,7.09e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.68e-39!115;UBERON:0000481!9.63e-08!347;UBERON:0000477!3.43e-07!286;UBERON:0000479!5.44e-07!787;UBERON:0007100!5.85e-07!27;UBERON:0003075!6.72e-07!86;UBERON:0007284!6.72e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!8.68e-39!115;UBERON:0000481!9.63e-08!347;UBERON:0000477!3.43e-07!286;UBERON:0000479!5.44e-07!787;UBERON:0007100!5.85e-07!27;UBERON:0003075!6.72e-07!86;UBERON:0007284!6.72e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.61e-08;25!UBERON:0004151;5.84e-07;3!UBERON:0006915;6.62e-07;3!UBERON:0007616;6.62e-07;3!UBERON:0002217;6.62e-07;3!UBERON:0002018;6.62e-07;3!UBERON:0007023;8.40e-07;114!UBERON:0003978;8.65e-07;3!UBERON:0000946;8.65e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0007100;5.61e-08;25!UBERON:0004151;5.84e-07;3!UBERON:0006915;6.62e-07;3!UBERON:0007616;6.62e-07;3!UBERON:0002217;6.62e-07;3!UBERON:0002018;6.62e-07;3!UBERON:0007023;8.40e-07;114!UBERON:0003978;8.65e-07;3!UBERON:0000946;8.65e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-25,114;UBERON:0007100,1.27e-08,27;UBERON:0004151,6.08e-07,3;UBERON:0006915,7.09e-07,3;UBERON:0007616,7.09e-07,3;UBERON:0002217,7.09e-07,3;UBERON:0002018,7.09e-07,3;UBERON:0003978,8.59e-07,3;UBERON:0009751,8.59e-07,3;UBERON:0000946,8.59e-07,3;UBERON:0002523,8.59e-07,3;UBERON:0005983,8.59e-07,3;UBERON:0002165,8.59e-07,3;UBERON:0002062,8.59e-07,3;UBERON:0007280,8.59e-07,3 | |||
|phase1_expression=0.54503513781167,1.2846031433459,1.83240725324762,1.0007329835313,1.78784437770915,2.61701557230111,0,6.31719873426831,14.3652095509911,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.0843174571537,0.50133791063589,1.30361867064741,0,0.486634870302636,0,0,0.351339142772504,2.75056058545197,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,4.58938593198102,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0.70296429550139,0,0,0,0,0,0,0.204154171254893,0.368502951935304,1.96318984233954,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,3.55621325001386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,0,0,0,0,1.71072446022705,0,1.8020583470635,0,0,1.74384027533312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0,0,0,0,0.234282829985426,2.10662269809403,0,5.17365356462525,0,0,0,0,0.343143423810856,0,0,0,0,0,1.5119514666484,0,0,0,0,0,0,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0,0,0,0,0,0,0.924291702687866,0.15350367472613,0,0.859361958946189,1.30515024522806,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0,0.855877976067841,3.81843897511124,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,12.4308928282267,2.75682671773062,0.66343897524122,0,0,0,0,1.239293992399,0,0,0,0,0,86.9763457426376,59.6023756257422,0,1.74967360122491,0,0.670302275535787,0,4.23647103495506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3646369187933,0,0.222886768554957,0,0.47748896947538,0,0,0,0.281338832821026,0,0,0,13.7481111893238,2.76283915531148,0,0,0,0,0,0,0,14.79651084554,0,0,0,0.463840490809256,0,0,0,7.24999575434793,0,0,0,0,0,0,0,0,0,0.331737779793674,0.591095237907095,2.19385397153973,0,0,8.07977714289869,0,0,0,0,9.57003479195758,0,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0,0,24.8815482769626,6.01511438622706,8.55442202907076,0,0,0,0.067401132980677,12.0386647094818,0,0,0,0,5.52418163989147,2.41981432097328,0.91821828489147,13.7114877793819,0,0,1.99396161812156,1.65495977937749,0.627865836814451,0,0,0.138674673013139,0,0,0,15.9001268100247,0,0,0,0,17.6520010008923,45.8049297528886,29.6034770422498,0,0,0.316553979779393,0.586654148204409,0,6.61704283691993,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,18.4326384839688,9.8538982325024,7.17873024576814,2.99518500748487,9.01374701086799,10.489058499768,2.62015542698232,0,0,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0.157611414598396,2.09818352539992,0,39.263927313893,0,31.4465943604281,15.2281153184049,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,4.16470909014009,4.08731193259131,1.65695622138878,0.992332043623902,0,0,0,0.544017803369474,0.7520696820681,3.67614692116154,4.91808946064707,0,0,0.122026264901963,0.1251909307065,0,2.66229723688445,0.807253238237985,0,0,0,2.28372266835974,0,0,0,1.49254802886874,0,3.88364103051829,0,0,7.11848977277229,0,1.20984739010591,1.5543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0.756215088665154,0.553258019713743,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,5.26472298444801,0,0.781514011233092,0,0,0,0.472763092328763,0,0,0.253663240775627,0,1.09651553371436,11.9090682813431,0,0,0.535701835878287,0.672567444437648,0.606965604236632,0.227662191351298,15.3455100381365,0,0,0.135939465953663,0.328863867814245,0.236387681767936,0.222462803784138,9.65465042061322,0,0,9.13158720509496,0,0,31.7355856144354,0,1.16241425368125,0.173858272302579,0,0,0,0,3.8720462293825,0,0,0.423387050190929,0,0,0,0,0,0,3.88457302312737,3.38787262625615,18.5570309014112,3.88568794447312,0,0,0,0,0,0,1.92935395269862,0.437119121007915,0,18.8764207750507,0,0,0.594092800654172,5.0718687310008,0,0.281951753939561,0.386747327841463,0,0,0,0,0.730336388246517,2.75237570042724,1.29005624836306,3.31320280605688,0.611923411718232,2.18175345170189,5.290268405154,1.85997509083376,20.7979032884138,20.7660749819419,0,0,0,0,0.801652215796681,0,0,13.8675017739378,4.82335434281121,0,0.103432995861895,3.83821167421766,4.28515976634733,0.129177819672012,0.682821857254437,0,7.70130615165795,3.23387502333151,2.8303177226605,3.08009970976753,1.41439311330634,6.52672069073355,5.65522606128223,0,0,0,0.179650404213174,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| ||
|short_description=p2@SCARA5 | |short_description=p2@SCARA5 | ||
}} | }} |
Latest revision as of 20:14, 17 September 2015
Short description: | p2@SCARA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCARA5_5end |
Coexpression cluster: | C2924_Synoviocyte_large_left_vagina_extraskeletal_eye_retina |
Association with transcript: | 1bp_to_ENST00000380385_5end |
EntrezGene: | SCARA5 |
HGNC: | 28701 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.66e-07 | 15 |
GAG secreting cell | 6.26e-07 | 9 |
carbohydrate secreting cell | 6.26e-07 | 9 |
synovial cell | 7.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.87e-25 | 114 |
primary circulatory organ | 1.27e-08 | 27 |
cardiac chamber | 6.08e-07 | 3 |
stratified squamous epithelium | 7.09e-07 | 3 |
layer of synovial tissue | 7.09e-07 | 3 |
synovial joint | 7.09e-07 | 3 |
synovial membrane of synovial joint | 7.09e-07 | 3 |
valve | 8.59e-07 | 3 |
cardiac mesenchyme | 8.59e-07 | 3 |
cardial valve | 8.59e-07 | 3 |
tunica intima | 8.59e-07 | 3 |
heart layer | 8.59e-07 | 3 |
endocardium | 8.59e-07 | 3 |
endocardial cushion | 8.59e-07 | 3 |
presumptive endocardium | 8.59e-07 | 3 |