FFCP PHASE1:Hg19::chr7:137139686..137139717,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9162 | |EntrezGene=9162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2855 | |HGNC=2855 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_ENST00000477835_5end | |association_with_transcript=-67bp_to_ENST00000477835_5end | ||
|cluster_id=chr7:137139686..137139717,- | |||
|coexpression_cluster_id=C4656 | |coexpression_cluster_id=C4656 | ||
|description=CAGE_peak_4_at_DGKI_5end | |description=CAGE_peak_4_at_DGKI_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.97e-17!180;CL:0000057!4.36e-13!75;CL:0000192!2.99e-08!42;CL:0000514!2.99e-08!42;CL:0000680!2.12e-07!57;CL:0000056!2.12e-07!57;CL:0000355!2.12e-07!57 | |ontology_enrichment_celltype=CL:0000055!3.97e-17!180;CL:0000057!4.36e-13!75;CL:0000192!2.99e-08!42;CL:0000514!2.99e-08!42;CL:0000680!2.12e-07!57;CL:0000056!2.12e-07!57;CL:0000355!2.12e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002549;1.29e-10;2!CL:0002548;1.62e-07;6!CL:0000048;2.59e-07;58!CL:0002494;4.36e-07;16 | |ontology_enrichment_celltype_v019=CL:0002549;1.29e-10;2!CL:0002548;1.62e-07;6!CL:0000048;2.59e-07;58!CL:0002494;4.36e-07;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.80e-10,2;CL:0002548,2.52e-07,6;CL:0002494,5.34e-07,16 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.46e-09!14 | |ontology_enrichment_disease=DOID:2394!2.46e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.17e-15;14!DOID:1909;3.21e-11;2!DOID:193;3.97e-09;29!DOID:120;1.54e-07;27 | |ontology_enrichment_disease_v019=DOID:2394;2.17e-15;14!DOID:1909;3.21e-11;2!DOID:193;3.97e-09;29!DOID:120;1.54e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.64e-15,14;DOID:1909,3.14e-11,2;DOID:193,4.42e-09,29;DOID:120,1.69e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000948!4.13e-08!24;UBERON:0005498!4.13e-08!24;UBERON:0004140!4.13e-08!24;UBERON:0009881!4.13e-08!24;UBERON:0004141!4.13e-08!24;UBERON:0003084!4.13e-08!24;UBERON:0007005!4.13e-08!24;UBERON:0004139!4.13e-08!24;UBERON:0004291!4.13e-08!24;UBERON:0004872!2.07e-07!84;UBERON:0002385!3.03e-07!63;UBERON:0001015!3.03e-07!63;UBERON:0000383!3.03e-07!63 | |ontology_enrichment_uberon=UBERON:0000948!4.13e-08!24;UBERON:0005498!4.13e-08!24;UBERON:0004140!4.13e-08!24;UBERON:0009881!4.13e-08!24;UBERON:0004141!4.13e-08!24;UBERON:0003084!4.13e-08!24;UBERON:0007005!4.13e-08!24;UBERON:0004139!4.13e-08!24;UBERON:0004291!4.13e-08!24;UBERON:0004872!2.07e-07!84;UBERON:0002385!3.03e-07!63;UBERON:0001015!3.03e-07!63;UBERON:0000383!3.03e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;2.02e-12;22!UBERON:0007100;8.83e-11;25!UBERON:0005629;1.29e-10;2!UBERON:0005358;1.29e-10;2!UBERON:0001886;1.29e-10;2!UBERON:0004086;1.29e-10;2!UBERON:0005282;1.29e-10;2!UBERON:0005281;1.29e-10;2!UBERON:0002118;3.26e-09;5!UBERON:0000992;7.78e-09;13!UBERON:0000991;1.91e-07;21!UBERON:0004151;5.54e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000948;2.02e-12;22!UBERON:0007100;8.83e-11;25!UBERON:0005629;1.29e-10;2!UBERON:0005358;1.29e-10;2!UBERON:0001886;1.29e-10;2!UBERON:0004086;1.29e-10;2!UBERON:0005282;1.29e-10;2!UBERON:0005281;1.29e-10;2!UBERON:0002118;3.26e-09;5!UBERON:0000992;7.78e-09;13!UBERON:0000991;1.91e-07;21!UBERON:0004151;5.54e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.92e-14,24;UBERON:0005498,2.92e-14,24;UBERON:0004140,2.92e-14,24;UBERON:0009881,2.92e-14,24;UBERON:0004141,2.92e-14,24;UBERON:0003084,2.92e-14,24;UBERON:0007005,2.92e-14,24;UBERON:0004139,2.92e-14,24;UBERON:0004291,2.92e-14,24;UBERON:0007100,1.67e-12,27;UBERON:0005629,1.80e-10,2;UBERON:0005358,1.80e-10,2;UBERON:0001886,1.80e-10,2;UBERON:0004086,1.80e-10,2;UBERON:0005282,1.80e-10,2;UBERON:0005281,1.80e-10,2;UBERON:0002118,3.92e-09,5;UBERON:0000992,8.56e-09,13;UBERON:0000991,1.84e-07,21;UBERON:0009196,1.84e-07,21;UBERON:0009117,1.84e-07,21;UBERON:0005564,1.84e-07,21;UBERON:0004176,4.27e-07,22;UBERON:0004151,4.91e-07,3 | |||
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| ||
|short_description=p4@DGKI | |short_description=p4@DGKI | ||
}} | }} |
Latest revision as of 14:16, 16 September 2015
Short description: | p4@DGKI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DGKI_5end |
Coexpression cluster: | C4656_Mesenchymal_melanoma_heart_teratocarcinoma_Fibroblast_mesenchymal_Preadipocyte |
Association with transcript: | -67bp_to_ENST00000477835_5end |
EntrezGene: | DGKI |
HGNC: | 2855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.80e-10 | 2 |
cardiac fibroblast | 2.52e-07 | 6 |
cardiocyte | 5.34e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
heart | 2.92e-14 | 24 |
primitive heart tube | 2.92e-14 | 24 |
primary heart field | 2.92e-14 | 24 |
anterior lateral plate mesoderm | 2.92e-14 | 24 |
heart tube | 2.92e-14 | 24 |
heart primordium | 2.92e-14 | 24 |
cardiac mesoderm | 2.92e-14 | 24 |
cardiogenic plate | 2.92e-14 | 24 |
heart rudiment | 2.92e-14 | 24 |
primary circulatory organ | 1.67e-12 | 27 |
vascular plexus | 1.80e-10 | 2 |
ventricle of nervous system | 1.80e-10 | 2 |
choroid plexus | 1.80e-10 | 2 |
brain ventricle | 1.80e-10 | 2 |
ventricular system of brain | 1.80e-10 | 2 |
ventricular system of central nervous system | 1.80e-10 | 2 |
right ovary | 3.92e-09 | 5 |
female gonad | 8.56e-09 | 13 |
gonad | 1.84e-07 | 21 |
indifferent external genitalia | 1.84e-07 | 21 |
indifferent gonad | 1.84e-07 | 21 |
gonad primordium | 1.84e-07 | 21 |
external genitalia | 4.27e-07 | 22 |
cardiac chamber | 4.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.64e-15 | 14 |
melanoma | 3.14e-11 | 2 |
reproductive organ cancer | 4.42e-09 | 29 |
female reproductive organ cancer | 1.69e-07 | 27 |