FFCP PHASE1:Hg19::chr17:77020477..77020492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114897 | |EntrezGene=114897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14324 | |HGNC=14324 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXJ1 | |UniProt=Q9BXJ1 | ||
|association_with_transcript=226bp_to_ENST00000311661,ENST00000339142,NM_030968,NM_198594,uc002jwp.2,uc002jwq.2_5end | |association_with_transcript=226bp_to_ENST00000311661,ENST00000339142,NM_030968,NM_198594,uc002jwp.2,uc002jwq.2_5end | ||
|cluster_id=chr17:77020477..77020492,+ | |||
|coexpression_cluster_id=C3694 | |coexpression_cluster_id=C3694 | ||
|description=CAGE_peak_6_at_C1QTNF1_5end | |description=CAGE_peak_6_at_C1QTNF1_5end | ||
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|ontology_enrichment_celltype=CL:0000680!4.50e-16!57;CL:0000056!4.50e-16!57;CL:0000355!4.50e-16!57;CL:0000183!7.97e-16!59;CL:0000187!3.31e-15!54;CL:0000192!1.53e-14!42;CL:0000514!1.53e-14!42;CL:0000359!3.80e-14!32;CL:0000055!8.46e-14!180;CL:0002494!9.22e-12!16;CL:0000393!9.35e-12!60;CL:0000211!9.35e-12!60;CL:0000222!1.48e-11!119;CL:0002539!7.09e-07!10 | |ontology_enrichment_celltype=CL:0000680!4.50e-16!57;CL:0000056!4.50e-16!57;CL:0000355!4.50e-16!57;CL:0000183!7.97e-16!59;CL:0000187!3.31e-15!54;CL:0000192!1.53e-14!42;CL:0000514!1.53e-14!42;CL:0000359!3.80e-14!32;CL:0000055!8.46e-14!180;CL:0002494!9.22e-12!16;CL:0000393!9.35e-12!60;CL:0000211!9.35e-12!60;CL:0000222!1.48e-11!119;CL:0002539!7.09e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002494;3.48e-19;16!CL:0000359;1.09e-17;32!CL:0000192;1.71e-12;43!CL:0000187;1.02e-08;55!CL:0002539;1.82e-08;10!CL:0002595;2.65e-08;5!CL:0000134;3.62e-08;55!CL:0000048;5.90e-07;58 | |ontology_enrichment_celltype_v019=CL:0002494;3.48e-19;16!CL:0000359;1.09e-17;32!CL:0000192;1.71e-12;43!CL:0000187;1.02e-08;55!CL:0002539;1.82e-08;10!CL:0002595;2.65e-08;5!CL:0000134;3.62e-08;55!CL:0000048;5.90e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.89e-19,16;CL:0000359,1.08e-18,32;CL:0000192,3.83e-17,43;CL:0000514,3.83e-17,43;CL:0000187,1.18e-15,55;CL:0000680,2.17e-15,58;CL:0000056,2.17e-15,58;CL:0000355,2.17e-15,58;CL:0000393,3.38e-13,61;CL:0000211,3.38e-13,61;CL:0000222,1.20e-09,121;CL:0002539,1.21e-08,10;CL:0002595,1.96e-08,5;CL:0000048,2.32e-07,427;CL:0000723,6.05e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;1.71e-12;43!CL:0000355;7.78e-08;58 | |ontology_enrichment_development_v019=CL:0000514;1.71e-12;43!CL:0000355;7.78e-08;58 | ||
|ontology_enrichment_disease=DOID:2394!3.38e-09!14 | |ontology_enrichment_disease=DOID:2394!3.38e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.65e-17;14!DOID:193;3.83e-07;29!DOID:120;6.64e-07;27 | |ontology_enrichment_disease_v019=DOID:2394;6.65e-17;14!DOID:193;3.83e-07;29!DOID:120;6.64e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,7.66e-17,14;DOID:193,4.34e-07,29;DOID:120,7.04e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0004872!3.51e-21!84;UBERON:0001009!1.95e-19!113;UBERON:0000486!8.94e-19!82;UBERON:0004535!6.00e-18!110;UBERON:0007100!1.56e-17!27;UBERON:0002049!2.68e-16!79;UBERON:0007798!2.68e-16!79;UBERON:0000948!9.92e-16!24;UBERON:0005498!9.92e-16!24;UBERON:0004140!9.92e-16!24;UBERON:0009881!9.92e-16!24;UBERON:0004141!9.92e-16!24;UBERON:0003084!9.92e-16!24;UBERON:0007005!9.92e-16!24;UBERON:0004139!9.92e-16!24;UBERON:0004291!9.92e-16!24;UBERON:0001134!1.98e-15!61;UBERON:0002036!1.98e-15!61;UBERON:0003082!1.98e-15!61;UBERON:0004290!3.04e-15!70;UBERON:0000914!3.87e-15!83;UBERON:0002329!3.87e-15!83;UBERON:0003077!3.87e-15!83;UBERON:0003059!3.87e-15!83;UBERON:0007282!3.87e-15!83;UBERON:0009618!3.87e-15!83;UBERON:0007285!3.87e-15!83;UBERON:0003914!4.25e-15!118;UBERON:0000055!5.05e-15!69;UBERON:0002385!7.08e-15!63;UBERON:0001015!7.08e-15!63;UBERON:0000383!7.08e-15!63;UBERON:0000477!5.33e-14!286;UBERON:0004573!1.27e-13!33;UBERON:0004571!1.27e-13!33;UBERON:0000119!1.54e-13!312;UBERON:0001637!1.99e-13!42;UBERON:0003509!1.99e-13!42;UBERON:0004572!1.99e-13!42;UBERON:0005256!2.02e-13!143;UBERON:0001981!2.78e-13!60;UBERON:0007500!2.78e-13!60;UBERON:0004537!2.78e-13!60;UBERON:0006965!2.78e-13!60;UBERON:0000483!5.36e-13!309;UBERON:0000490!1.46e-12!138;UBERON:0002100!3.62e-11!216;UBERON:0000481!3.96e-11!347;UBERON:0004111!8.01e-11!241;UBERON:0003104!2.19e-10!238;UBERON:0009142!2.19e-10!238;UBERON:0003103!5.53e-09!69;UBERON:0000468!1.97e-08!659;UBERON:0001048!4.90e-08!168;UBERON:0000475!6.14e-08!365;UBERON:0000025!6.74e-07!194;UBERON:0004237!7.09e-07!10;UBERON:0004695!7.09e-07!10;UBERON:0002111!7.09e-07!10;UBERON:0004178!7.09e-07!10 | |ontology_enrichment_uberon=UBERON:0004872!3.51e-21!84;UBERON:0001009!1.95e-19!113;UBERON:0000486!8.94e-19!82;UBERON:0004535!6.00e-18!110;UBERON:0007100!1.56e-17!27;UBERON:0002049!2.68e-16!79;UBERON:0007798!2.68e-16!79;UBERON:0000948!9.92e-16!24;UBERON:0005498!9.92e-16!24;UBERON:0004140!9.92e-16!24;UBERON:0009881!9.92e-16!24;UBERON:0004141!9.92e-16!24;UBERON:0003084!9.92e-16!24;UBERON:0007005!9.92e-16!24;UBERON:0004139!9.92e-16!24;UBERON:0004291!9.92e-16!24;UBERON:0001134!1.98e-15!61;UBERON:0002036!1.98e-15!61;UBERON:0003082!1.98e-15!61;UBERON:0004290!3.04e-15!70;UBERON:0000914!3.87e-15!83;UBERON:0002329!3.87e-15!83;UBERON:0003077!3.87e-15!83;UBERON:0003059!3.87e-15!83;UBERON:0007282!3.87e-15!83;UBERON:0009618!3.87e-15!83;UBERON:0007285!3.87e-15!83;UBERON:0003914!4.25e-15!118;UBERON:0000055!5.05e-15!69;UBERON:0002385!7.08e-15!63;UBERON:0001015!7.08e-15!63;UBERON:0000383!7.08e-15!63;UBERON:0000477!5.33e-14!286;UBERON:0004573!1.27e-13!33;UBERON:0004571!1.27e-13!33;UBERON:0000119!1.54e-13!312;UBERON:0001637!1.99e-13!42;UBERON:0003509!1.99e-13!42;UBERON:0004572!1.99e-13!42;UBERON:0005256!2.02e-13!143;UBERON:0001981!2.78e-13!60;UBERON:0007500!2.78e-13!60;UBERON:0004537!2.78e-13!60;UBERON:0006965!2.78e-13!60;UBERON:0000483!5.36e-13!309;UBERON:0000490!1.46e-12!138;UBERON:0002100!3.62e-11!216;UBERON:0000481!3.96e-11!347;UBERON:0004111!8.01e-11!241;UBERON:0003104!2.19e-10!238;UBERON:0009142!2.19e-10!238;UBERON:0003103!5.53e-09!69;UBERON:0000468!1.97e-08!659;UBERON:0001048!4.90e-08!168;UBERON:0000475!6.14e-08!365;UBERON:0000025!6.74e-07!194;UBERON:0004237!7.09e-07!10;UBERON:0004695!7.09e-07!10;UBERON:0002111!7.09e-07!10;UBERON:0004178!7.09e-07!10 | ||
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| ||
|short_description=p6@C1QTNF1 | |short_description=p6@C1QTNF1 | ||
}} | }} |
Latest revision as of 23:58, 17 September 2015
Short description: | p6@C1QTNF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C1QTNF1_5end |
Coexpression cluster: | C3694_Cardiac_Smooth_Mesenchymal_mesenchymal_Hair_heart_Fibroblast |
Association with transcript: | 226bp_to_ENST00000311661, ENST00000339142, NM_030968, NM_198594, uc002jwp.2, uc002jwq.2_5end |
EntrezGene: | C1QTNF1 |
HGNC: | 14324 |
UniProt: | Q9BXJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.89e-19 | 16 |
vascular associated smooth muscle cell | 1.08e-18 | 32 |
smooth muscle cell | 3.83e-17 | 43 |
smooth muscle myoblast | 3.83e-17 | 43 |
muscle cell | 1.18e-15 | 55 |
muscle precursor cell | 2.17e-15 | 58 |
myoblast | 2.17e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.17e-15 | 58 |
electrically responsive cell | 3.38e-13 | 61 |
electrically active cell | 3.38e-13 | 61 |
mesodermal cell | 1.20e-09 | 121 |
aortic smooth muscle cell | 1.21e-08 | 10 |
smooth muscle cell of the subclavian artery | 1.96e-08 | 5 |
multi fate stem cell | 2.32e-07 | 427 |
somatic stem cell | 6.05e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.66e-17 | 14 |
reproductive organ cancer | 4.34e-07 | 29 |
female reproductive organ cancer | 7.04e-07 | 27 |