FFCP PHASE1:Hg19::chr19:31630560..31630583,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:31630560..31630583,- | |||
|coexpression_cluster_id=C165 | |coexpression_cluster_id=C165 | ||
|description=CAGE_peak_at_chr19:31630560..31630583,- | |description=CAGE_peak_at_chr19:31630560..31630583,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000515!6.65e-07!4 | |ontology_enrichment_celltype=CL:0000515!6.65e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000222;3.30e-40;1!CL:0002149;6.34e-08;6!CL:0002255;6.34e-08;6 | |ontology_enrichment_celltype_v019=CL:0000222;3.30e-40;1!CL:0002149;6.34e-08;6!CL:0002255;6.34e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,5.92e-08,6;CL:0002255,5.92e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.97e-09;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.97e-09;5 | ||
|ontology_enrichment_disease=DOID:6193!6.59e-08!1;DOID:0060085!2.07e-07!1;DOID:3165!2.07e-07!1;DOID:0060121!2.07e-07!1;DOID:2438!2.07e-07!1;DOID:4418!2.07e-07!1 | |ontology_enrichment_disease=DOID:6193!6.59e-08!1;DOID:0060085!2.07e-07!1;DOID:3165!2.07e-07!1;DOID:0060121!2.07e-07!1;DOID:2438!2.07e-07!1;DOID:4418!2.07e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;6.62e-41;1!DOID:3350;3.11e-21;2!DOID:3001;6.34e-08;6 | |ontology_enrichment_disease_v019=DOID:6193;6.62e-41;1!DOID:3350;3.11e-21;2!DOID:3001;6.34e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,6.62e-41,1;DOID:3350,3.11e-21,2;DOID:3001,5.92e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.97e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0002046;2.97e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.97e-09,5;UBERON:0004117,2.97e-09,5;UBERON:0007689,2.97e-09,5;UBERON:0007123,2.97e-09,5;UBERON:0003091,2.97e-09,5 | |||
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|short_description=p@chr19:31630560..31630583,- | |short_description=p@chr19:31630560..31630583,- | ||
}} | }} |
Latest revision as of 06:10, 26 July 2015
Short description: | p@chr19:31630560..31630583, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:31630560..31630583, - |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 5.92e-08 | 6 |
stromal cell of endometrium | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.97e-09 | 5 |
pharyngeal pouch | 2.97e-09 | 5 |
thyroid diverticulum | 2.97e-09 | 5 |
pharyngeal pouch 2 | 2.97e-09 | 5 |
thyroid primordium | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.62e-41 | 1 |
mesenchymal cell neoplasm | 3.11e-21 | 2 |
female reproductive endometrioid cancer | 5.92e-08 | 6 |