FFCP PHASE1:Hg19::chr1:27953031..27953113,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:27953031..27953113,-
|short_description=p5@FGR
|description=CAGE_peak_5_at_FGR_5end
|association_with_transcript=0bp_to_ENST00000374003,NM_001042729,uc001b...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2268 | |EntrezGene=2268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3697 | |HGNC=3697 | ||
|TSSclassifier=strong | |||
|UniProt=P09769,P78453 | |UniProt=P09769,P78453 | ||
|association_with_transcript=0bp_to_ENST00000374003,NM_001042729,uc001bol.2_5end | |||
|cluster_id=chr1:27953031..27953113,- | |||
|description=CAGE_peak_5_at_FGR_5end | |||
|id=chr1:27953031..27953113,- | |||
|ontology_enrichment_celltype=CL:0002087!7.62e-66!119;CL:0000738!2.97e-64!140;CL:0002031!5.11e-56!124;CL:0000037!1.23e-49!172;CL:0000566!1.23e-49!172;CL:0000988!4.24e-45!182;CL:0002032!1.14e-44!165;CL:0000837!1.14e-44!165;CL:0000542!1.57e-37!53;CL:0000051!1.57e-37!53;CL:0000838!1.86e-36!52;CL:0002057!6.14e-28!42;CL:0000860!3.04e-25!45;CL:0000945!3.97e-25!24;CL:0000826!3.97e-25!24;CL:0002194!3.93e-24!63;CL:0000576!3.93e-24!63;CL:0000040!3.93e-24!63;CL:0000559!3.93e-24!63;CL:0000766!6.87e-24!76;CL:0002009!5.86e-23!65;CL:0000839!2.29e-21!70;CL:0000557!7.21e-21!71;CL:0000236!1.17e-15!14;CL:0000625!4.96e-15!11;CL:0000763!1.62e-13!112;CL:0000049!1.62e-13!112;CL:0000791!1.18e-12!18;CL:0000789!1.18e-12!18;CL:0002420!1.18e-12!18;CL:0002419!1.18e-12!18;CL:0000790!1.18e-12!18;CL:0000084!1.53e-10!25;CL:0000827!1.53e-10!25;CL:0000134!3.42e-10!358;CL:0002320!1.68e-09!365;CL:0002393!5.09e-09!9;CL:0002397!5.09e-09!9;CL:0000219!3.73e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.63e-40;24!CL:0000542;7.93e-33;53!CL:0000625;4.90e-27;11!CL:0000236;8.32e-23;13!CL:0002087;2.34e-18;104!CL:0000791;2.39e-18;18!CL:0000789;2.39e-18;18!CL:0002419;2.39e-18;18!CL:0000084;8.23e-15;25!CL:0000738;6.24e-11;136!CL:0000860;4.62e-09;33!CL:0002057;4.62e-09;33!CL:0000623;6.87e-09;3!CL:0000767;3.39e-08;3!CL:0000226;5.67e-08;3!CL:0000842;5.67e-08;3!CL:0000988;1.60e-07;177!CL:0000576;1.66e-07;48!CL:0000473;9.03e-07;39!CL:0000234;9.03e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.42e-59,53;CL:0000051,1.42e-59,53;CL:0002087,6.72e-59,115;CL:0000738,8.00e-58,136;CL:0000838,1.33e-57,52;CL:0002031,3.36e-47,120;CL:0000037,8.64e-44,168;CL:0000988,9.38e-41,177;CL:0000945,2.61e-40,24;CL:0000826,2.61e-40,24;CL:0002032,1.96e-39,161;CL:0000837,1.96e-39,161;CL:0000625,4.73e-27,11;CL:0000236,4.34e-25,14;CL:0000791,2.37e-18,18;CL:0000789,2.37e-18,18;CL:0002420,2.37e-18,18;CL:0002419,2.37e-18,18;CL:0000790,2.37e-18,18;CL:0000084,8.19e-15,25;CL:0000827,8.19e-15,25;CL:0000134,1.55e-12,354;CL:0002320,5.34e-12,361;CL:0000860,4.73e-11,42;CL:0002057,4.73e-11,42;CL:0000219,4.04e-10,386;CL:0000766,3.02e-09,72;CL:0000473,3.49e-09,48;CL:0000234,3.49e-09,48;CL:0000623,6.96e-09,3;CL:0000825,6.96e-09,3;CL:0000767,3.52e-08,3;CL:0000226,5.89e-08,3;CL:0000842,5.89e-08,3;CL:0000048,7.38e-08,427;CL:0000723,1.50e-07,433;CL:0002194,1.52e-07,59;CL:0000576,1.52e-07,59;CL:0000040,1.52e-07,59;CL:0000559,1.52e-07,59;CL:0002009,3.54e-07,61;CL:0000034,3.72e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000051;7.93e-33;53!CL:0000790;2.39e-18;18!CL:0002057;3.11e-09;42 | |||
|ontology_enrichment_disease=DOID:0060058!2.18e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.10e-32!102;UBERON:0003061!8.10e-32!102;UBERON:0002193!1.28e-29!112;UBERON:0002371!5.64e-17!80;UBERON:0001474!1.22e-15!86;UBERON:0002405!1.43e-15!115;UBERON:0004765!4.85e-12!101;UBERON:0001434!4.85e-12!101;UBERON:0000178!1.40e-11!15;UBERON:0000179!1.40e-11!15;UBERON:0000463!1.40e-11!15;UBERON:0003081!2.31e-10!216;UBERON:0007023!6.93e-10!115;UBERON:0002384!5.51e-09!375;UBERON:0004177!1.08e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-21;15!UBERON:0000179;1.08e-21;15!UBERON:0000463;1.08e-21;15!UBERON:0002390;3.01e-13;32!UBERON:0002193;2.87e-09;42!UBERON:0002106;5.15e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-21,15;UBERON:0000179,1.10e-21,15;UBERON:0000463,1.10e-21,15;UBERON:0002390,4.23e-18,98;UBERON:0003061,4.23e-18,98;UBERON:0002193,5.22e-18,108;UBERON:0002384,2.87e-11,371;UBERON:0002106,4.28e-08,3;UBERON:0004854,4.28e-08,3;UBERON:0009034,4.28e-08,3;UBERON:0002095,4.28e-08,3;UBERON:0004782,4.28e-08,3;UBERON:0003281,4.28e-08,3;UBERON:0009664,4.28e-08,3;UBERON:0002296,4.28e-08,3;UBERON:0005602,4.28e-08,3;UBERON:0001179,4.28e-08,3;UBERON:0006293,4.28e-08,3;UBERON:0002405,1.22e-07,93 | |||
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|short_description=p5@FGR | |||
}} | }} |
Latest revision as of 08:24, 17 September 2015
Short description: | p5@FGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FGR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374003, NM_001042729, uc001bol.2_5end |
EntrezGene: | FGR |
HGNC: | 3697 |
UniProt: | P09769P78453 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-21 | 15 |
haemolymphatic fluid | 1.10e-21 | 15 |
organism substance | 1.10e-21 | 15 |
hematopoietic system | 4.23e-18 | 98 |
blood island | 4.23e-18 | 98 |
hemolymphoid system | 5.22e-18 | 108 |
connective tissue | 2.87e-11 | 371 |
spleen | 4.28e-08 | 3 |
gastrointestinal system mesentery | 4.28e-08 | 3 |
stomach region | 4.28e-08 | 3 |
mesentery | 4.28e-08 | 3 |
gastrointestinal system serosa | 4.28e-08 | 3 |
mesentery of stomach | 4.28e-08 | 3 |
gut mesentery | 4.28e-08 | 3 |
dorsal mesentery | 4.28e-08 | 3 |
dorsal mesogastrium | 4.28e-08 | 3 |
peritoneal cavity | 4.28e-08 | 3 |
spleen primordium | 4.28e-08 | 3 |
immune system | 1.22e-07 | 93 |