FFCP PHASE1:Hg19::chr2:27435634..27435665,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8884 | |EntrezGene=8884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11041 | |HGNC=11041 | ||
|TSSclassifier=strong | |||
|UniProt=E7EXC0 | |UniProt=E7EXC0 | ||
|association_with_transcript=0bp_to_ENST00000430186_5end | |association_with_transcript=0bp_to_ENST00000430186_5end | ||
|cluster_id=chr2:27435634..27435665,- | |||
|coexpression_cluster_id=C123 | |coexpression_cluster_id=C123 | ||
|description=CAGE_peak_6_at_SLC5A6_5end | |description=CAGE_peak_6_at_SLC5A6_5end | ||
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|ontology_enrichment_celltype=CL:0000738!2.36e-14!140;CL:0000037!4.45e-14!172;CL:0000566!4.45e-14!172;CL:0000988!1.00e-13!182;CL:0002032!1.74e-12!165;CL:0000837!1.74e-12!165;CL:0002031!9.06e-11!124;CL:0002087!1.26e-10!119;CL:0000838!6.32e-08!52;CL:0000542!1.50e-07!53;CL:0000051!1.50e-07!53;CL:0000084!6.06e-07!25;CL:0000827!6.06e-07!25 | |ontology_enrichment_celltype=CL:0000738!2.36e-14!140;CL:0000037!4.45e-14!172;CL:0000566!4.45e-14!172;CL:0000988!1.00e-13!182;CL:0002032!1.74e-12!165;CL:0000837!1.74e-12!165;CL:0002031!9.06e-11!124;CL:0002087!1.26e-10!119;CL:0000838!6.32e-08!52;CL:0000542!1.50e-07!53;CL:0000051!1.50e-07!53;CL:0000084!6.06e-07!25;CL:0000827!6.06e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.49e-23;6!CL:0000791;4.93e-20;18!CL:0000789;4.93e-20;18!CL:0002419;4.93e-20;18!CL:0000542;7.20e-15;53!CL:0000084;7.89e-14;25!CL:0000623;8.45e-13;3!CL:0000898;2.94e-12;3!CL:0000767;5.46e-12;3!CL:0000226;7.50e-12;3!CL:0000842;7.50e-12;3!CL:0000094;1.47e-11;8!CL:0000236;7.08e-10;13!CL:0000815;9.99e-09;2!CL:0000792;9.99e-09;2!CL:0002677;9.99e-09;2!CL:0000081;2.56e-08;11 | |ontology_enrichment_celltype_v019=CL:0000624;2.49e-23;6!CL:0000791;4.93e-20;18!CL:0000789;4.93e-20;18!CL:0002419;4.93e-20;18!CL:0000542;7.20e-15;53!CL:0000084;7.89e-14;25!CL:0000623;8.45e-13;3!CL:0000898;2.94e-12;3!CL:0000767;5.46e-12;3!CL:0000226;7.50e-12;3!CL:0000842;7.50e-12;3!CL:0000094;1.47e-11;8!CL:0000236;7.08e-10;13!CL:0000815;9.99e-09;2!CL:0000792;9.99e-09;2!CL:0002677;9.99e-09;2!CL:0000081;2.56e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.10e-24,136;CL:0000624,1.99e-23,6;CL:0000838,2.51e-22,52;CL:0000542,8.19e-22,53;CL:0000051,8.19e-22,53;CL:0000037,2.56e-20,168;CL:0000791,4.24e-20,18;CL:0000789,4.24e-20,18;CL:0002420,4.24e-20,18;CL:0002419,4.24e-20,18;CL:0000790,4.24e-20,18;CL:0000988,7.50e-19,177;CL:0002087,3.79e-17,115;CL:0002032,4.79e-16,161;CL:0000837,4.79e-16,161;CL:0000084,7.10e-14,25;CL:0000827,7.10e-14,25;CL:0002031,1.88e-13,120;CL:0000623,8.45e-13,3;CL:0000825,8.45e-13,3;CL:0000898,2.48e-12,3;CL:0000767,6.12e-12,3;CL:0000226,7.10e-12,3;CL:0000842,7.10e-12,3;CL:0000094,1.49e-11,8;CL:0000236,4.02e-09,14;CL:0000815,8.42e-09,2;CL:0000792,8.42e-09,2;CL:0002677,8.42e-09,2;CL:0000081,2.58e-08,11;CL:0000134,5.09e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;4.93e-20;18!CL:0000051;7.20e-15;53 | |ontology_enrichment_development_v019=CL:0000790;4.93e-20;18!CL:0000051;7.20e-15;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0.791300934685361,0,0,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0,0.0821005894499457,0,5.50709987588466,7.29275856384704,2.16742572642506,0,0,0.369754010166788,0,0.284338464974843,0,1.66198622559563,3.20871115952227,2.82114131930607,0.223915474239924,0,0,0.436194716338694,0.377875943688809,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0,0.47296445977717,0,0,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0,0.598390972864896,0.426224750532694,0,0,0,0.251248665256743,0,0.217188844705117,0,0.736555271975129,0.316462387440884,0.633765858935825,0.425208599930087,0.209658645508376,0.336985893439485,0.600707571366025,0.16072558669708,1.14005097496499,0.59675003159727,0.365328307529268,0,0,0.889509253863555,0,1.20118796110804,1.14950487990897,0,1.90810750907073,17.6456020423929,13.5064553555316,17.9668417218858,1.32171328579026,3.36305137788922,0.526768169550154,10.4256178160332,17.6854843237124,10.6912779479745,0.334372990781356,5.86660079940463,5.6813736688168,0,0.891283655081389,7.65975359434577,5.09527957542329,6.22848886659536,0.128091319725675,0.780356085359269,0.328875809207352,1.38175008892924,1.15921234294021,7.26604159494096,4.54819407752512,3.1360657141493,0.339928028092699,6.13152789763074,10.3088233644789,6.07247260846807,0,0,2.85135613334512,0.602300476311091,0.255973222308837,0,0.473554504088034,0,11.6931911070345,17.6510529217115,13.6134939649831,0,0,0.12786256184353,0,0.50133791063589,0,0,0.973269740605272,0,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,2.14641561874808,0.571994910780128,2.60020250930695,0,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,5.27121669744253,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0.386521706326594,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.220587945464788,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0,0.352226082707465,0.144366447761074,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0.425325291727159,0.179117045405697,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0.576479813667846,0.12624243342638,0,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,8.6693534488848,15.5251853898852,12.1925884465761,0.508189248444927,1.30139853857622,0.773288812777695,0.335032530668698,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.89475236572042,5.1771408196468,5.54983300577911,0.303127571446259,0,0.907170879989041,0,0,0,0,0.511707249066704,0,0,0.462629081407967,0,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.206082023295445,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.92947049429925,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0.766021480529467,0.211673582723883,0,0,0.228234679033192,0.47003968731907,0,0.338583555603207,0.481764225311099,0,0,0,0,0,0,0.390776190804081,0,1.23087398947712,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0.307160702099232,0.994147647766298,0,0,0.329607748453519,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.262379999988587,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0.10893846351899,0,0,0.113942055847001,0.46112780877612,0.179515288819544,0.217294743844016,0,0,0,0,0.31396051279005,0,0,0,0.167821586975843,0.189753732724185,0.158936578980379,0,0.163232808159148,0.424059214301822,0,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0.417687798021821,0,0,0,0.91227394607833,0,0,0,0,0.30607276163049,0.063186579628488,0.450970258243478,0.31106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| ||
|short_description=p6@SLC5A6 | |short_description=p6@SLC5A6 | ||
}} | }} |
Latest revision as of 16:27, 16 September 2015
Short description: | p6@SLC5A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC5A6_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | 0bp_to_ENST00000430186_5end |
EntrezGene: | SLC5A6 |
HGNC: | 11041 |
UniProt: | E7EXC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.10e-24 | 136 |
CD4-positive, alpha-beta T cell | 1.99e-23 | 6 |
lymphoid lineage restricted progenitor cell | 2.51e-22 | 52 |
lymphocyte | 8.19e-22 | 53 |
common lymphoid progenitor | 8.19e-22 | 53 |
hematopoietic stem cell | 2.56e-20 | 168 |
mature alpha-beta T cell | 4.24e-20 | 18 |
alpha-beta T cell | 4.24e-20 | 18 |
immature T cell | 4.24e-20 | 18 |
mature T cell | 4.24e-20 | 18 |
immature alpha-beta T cell | 4.24e-20 | 18 |
hematopoietic cell | 7.50e-19 | 177 |
nongranular leukocyte | 3.79e-17 | 115 |
hematopoietic oligopotent progenitor cell | 4.79e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.79e-16 | 161 |
T cell | 7.10e-14 | 25 |
pro-T cell | 7.10e-14 | 25 |
hematopoietic lineage restricted progenitor cell | 1.88e-13 | 120 |
natural killer cell | 8.45e-13 | 3 |
pro-NK cell | 8.45e-13 | 3 |
naive T cell | 2.48e-12 | 3 |
basophil | 6.12e-12 | 3 |
single nucleate cell | 7.10e-12 | 3 |
mononuclear cell | 7.10e-12 | 3 |
granulocyte | 1.49e-11 | 8 |
B cell | 4.02e-09 | 14 |
regulatory T cell | 8.42e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.42e-09 | 2 |
naive regulatory T cell | 8.42e-09 | 2 |
blood cell | 2.58e-08 | 11 |
mesenchymal cell | 5.09e-07 | 354 |