FFCP PHASE1:Hg19::chr19:35504204..35504215,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57655 | |EntrezGene=57655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29305 | |HGNC=29305 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=44bp_to_uc002nxm.1_5end | |association_with_transcript=44bp_to_uc002nxm.1_5end | ||
|cluster_id=chr19:35504204..35504215,+ | |||
|description=CAGE_peak_7_at_GRAMD1A_5end | |description=CAGE_peak_7_at_GRAMD1A_5end | ||
|id=chr19:35504204..35504215,+ | |id=chr19:35504204..35504215,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.41e-21!140;CL:0002087!4.40e-18!119;CL:0000791!9.21e-17!18;CL:0000789!9.21e-17!18;CL:0002420!9.21e-17!18;CL:0002419!9.21e-17!18;CL:0000790!9.21e-17!18;CL:0000037!1.02e-16!172;CL:0000566!1.02e-16!172;CL:0000988!2.13e-16!182;CL:0002031!1.41e-15!124;CL:0000084!1.24e-14!25;CL:0000827!1.24e-14!25;CL:0002032!1.30e-13!165;CL:0000837!1.30e-13!165;CL:0002057!6.64e-13!42;CL:0000860!1.26e-11!45;CL:0000766!9.04e-11!76;CL:0000624!1.03e-10!6;CL:0000557!5.31e-10!71;CL:0002009!1.28e-09!65;CL:0000625!1.76e-09!11;CL:0002194!4.10e-09!63;CL:0000576!4.10e-09!63;CL:0000040!4.10e-09!63;CL:0000559!4.10e-09!63;CL:0000839!2.58e-08!70;CL:0000838!1.67e-07!52;CL:0000763!2.82e-07!112;CL:0000049!2.82e-07!112;CL:0000542!2.89e-07!53;CL:0000051!2.89e-07!53 | |ontology_enrichment_celltype=CL:0000738!3.41e-21!140;CL:0002087!4.40e-18!119;CL:0000791!9.21e-17!18;CL:0000789!9.21e-17!18;CL:0002420!9.21e-17!18;CL:0002419!9.21e-17!18;CL:0000790!9.21e-17!18;CL:0000037!1.02e-16!172;CL:0000566!1.02e-16!172;CL:0000988!2.13e-16!182;CL:0002031!1.41e-15!124;CL:0000084!1.24e-14!25;CL:0000827!1.24e-14!25;CL:0002032!1.30e-13!165;CL:0000837!1.30e-13!165;CL:0002057!6.64e-13!42;CL:0000860!1.26e-11!45;CL:0000766!9.04e-11!76;CL:0000624!1.03e-10!6;CL:0000557!5.31e-10!71;CL:0002009!1.28e-09!65;CL:0000625!1.76e-09!11;CL:0002194!4.10e-09!63;CL:0000576!4.10e-09!63;CL:0000040!4.10e-09!63;CL:0000559!4.10e-09!63;CL:0000839!2.58e-08!70;CL:0000838!1.67e-07!52;CL:0000763!2.82e-07!112;CL:0000049!2.82e-07!112;CL:0000542!2.89e-07!53;CL:0000051!2.89e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.74e-21;18!CL:0000789;1.74e-21;18!CL:0002419;1.74e-21;18!CL:0000623;1.94e-19;3!CL:0000084;2.78e-19;25!CL:0000624;6.54e-17;6!CL:0000860;4.63e-10;33!CL:0002057;4.63e-10;33!CL:0000625;1.21e-09;11!CL:0002087;2.01e-09;104!CL:0000473;3.91e-09;39!CL:0000234;3.91e-09;39!CL:0000226;4.35e-09;3!CL:0000784;4.35e-09;3!CL:0000842;4.35e-09;3!CL:0000542;2.82e-08;53!CL:0002032;1.97e-07;1!CL:0000557;1.97e-07;1!CL:0000738;3.23e-07;136 | |ontology_enrichment_celltype_v019=CL:0000791;1.74e-21;18!CL:0000789;1.74e-21;18!CL:0002419;1.74e-21;18!CL:0000623;1.94e-19;3!CL:0000084;2.78e-19;25!CL:0000624;6.54e-17;6!CL:0000860;4.63e-10;33!CL:0002057;4.63e-10;33!CL:0000625;1.21e-09;11!CL:0002087;2.01e-09;104!CL:0000473;3.91e-09;39!CL:0000234;3.91e-09;39!CL:0000226;4.35e-09;3!CL:0000784;4.35e-09;3!CL:0000842;4.35e-09;3!CL:0000542;2.82e-08;53!CL:0002032;1.97e-07;1!CL:0000557;1.97e-07;1!CL:0000738;3.23e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,6.34e-32,115;CL:0000738,4.78e-31,136;CL:0000037,3.28e-26,168;CL:0002031,1.97e-25,120;CL:0000988,1.28e-24,177;CL:0002032,1.89e-21,161;CL:0000837,1.89e-21,161;CL:0000791,1.95e-21,18;CL:0000789,1.95e-21,18;CL:0002420,1.95e-21,18;CL:0002419,1.95e-21,18;CL:0000790,1.95e-21,18;CL:0000623,1.37e-19,3;CL:0000825,1.37e-19,3;CL:0000084,3.04e-19,25;CL:0000827,3.04e-19,25;CL:0000624,7.42e-17,6;CL:0000838,2.63e-15,52;CL:0000542,5.65e-15,53;CL:0000051,5.65e-15,53;CL:0000473,6.87e-14,48;CL:0000234,6.87e-14,48;CL:0000860,2.14e-13,42;CL:0002057,2.14e-13,42;CL:0000557,4.73e-13,67;CL:0002194,7.73e-13,59;CL:0000576,7.73e-13,59;CL:0000040,7.73e-13,59;CL:0000559,7.73e-13,59;CL:0002009,2.37e-12,61;CL:0000766,4.53e-12,72;CL:0000134,1.07e-11,354;CL:0002320,2.31e-11,361;CL:0000839,2.92e-11,66;CL:0000219,3.49e-10,386;CL:0000625,1.24e-09,11;CL:0000226,2.75e-09,3;CL:0000842,2.75e-09,3;CL:0000034,3.54e-09,441;CL:0000784,4.35e-09,3;CL:0000048,9.71e-09,427;CL:0000723,1.54e-08,433;CL:0000763,1.58e-08,108;CL:0000049,1.58e-08,108 | |||
|ontology_enrichment_development_v019=CL:0000790;1.74e-21;18!CL:0002057;1.41e-10;42!CL:0000051;2.82e-08;53 | |ontology_enrichment_development_v019=CL:0000790;1.74e-21;18!CL:0002057;1.41e-10;42!CL:0000051;2.82e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.51e-09!115;UBERON:0002193!4.55e-09!112;UBERON:0002390!1.08e-08!102;UBERON:0003061!1.08e-08!102;UBERON:0002371!4.47e-08!80;UBERON:0001474!4.86e-07!86 | |ontology_enrichment_uberon=UBERON:0002405!2.51e-09!115;UBERON:0002193!4.55e-09!112;UBERON:0002390!1.08e-08!102;UBERON:0003061!1.08e-08!102;UBERON:0002371!4.47e-08!80;UBERON:0001474!4.86e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.12e-11,76;UBERON:0002390,3.29e-11,98;UBERON:0003061,3.29e-11,98;UBERON:0002384,6.61e-11,371;UBERON:0001474,3.07e-10,82;UBERON:0002193,6.57e-10,108;UBERON:0004765,4.02e-09,90;UBERON:0002405,9.43e-09,93;UBERON:0001434,5.63e-08,100 | |||
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| ||
|short_description=p7@GRAMD1A | |short_description=p7@GRAMD1A | ||
}} | }} |
Latest revision as of 09:22, 17 September 2015
Short description: | p7@GRAMD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GRAMD1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_uc002nxm.1_5end |
EntrezGene: | GRAMD1A |
HGNC: | 29305 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.12e-11 | 76 |
hematopoietic system | 3.29e-11 | 98 |
blood island | 3.29e-11 | 98 |
connective tissue | 6.61e-11 | 371 |
bone element | 3.07e-10 | 82 |
hemolymphoid system | 6.57e-10 | 108 |
skeletal element | 4.02e-09 | 90 |
immune system | 9.43e-09 | 93 |
skeletal system | 5.63e-08 | 100 |