FFCP PHASE1:Hg19::chr4:110723298..110723312,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3426 | |EntrezGene=3426 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5394 | |HGNC=5394 | ||
|TSSclassifier=strong | |||
|UniProt=P05156,A8K3L0 | |UniProt=P05156,A8K3L0 | ||
|association_with_transcript=22bp_to_ENST00000394634,NM_000204,uc003hzr.3,uc003hzs.3,uc011cft.1_5end | |association_with_transcript=22bp_to_ENST00000394634,NM_000204,uc003hzr.3,uc003hzs.3,uc011cft.1_5end | ||
|cluster_id=chr4:110723298..110723312,- | |||
|coexpression_cluster_id=C4359 | |coexpression_cluster_id=C4359 | ||
|description=CAGE_peak_3_at_CFI_5end | |description=CAGE_peak_3_at_CFI_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002139!2.41e-08!24 | |ontology_enrichment_celltype=CL:0002139!2.41e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.35e-09;24!CL:0002138;1.95e-07;6 | |ontology_enrichment_celltype_v019=CL:0002139;4.35e-09;24!CL:0002138;1.95e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.65e-09,24;CL:0005020,1.78e-07,6;CL:0002138,1.78e-07,6;CL:0005022,1.78e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.95e-07;6 | |ontology_enrichment_development_v019=CL:0005022;1.95e-07;6 | ||
|ontology_enrichment_disease=DOID:2394!4.70e-08!14 | |ontology_enrichment_disease=DOID:2394!4.70e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.02e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;1.02e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,9.39e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.90e-18!115;UBERON:0000477!9.10e-15!286;UBERON:0004111!1.40e-14!241;UBERON:0000119!1.18e-13!312;UBERON:0000483!1.88e-13!309;UBERON:0000025!4.44e-12!194;UBERON:0000467!5.37e-11!625;UBERON:0000480!7.70e-11!626;UBERON:0003075!8.88e-10!86;UBERON:0007284!8.88e-10!86;UBERON:0000468!4.61e-09!659;UBERON:0002346!8.12e-09!90;UBERON:0005743!2.34e-08!86;UBERON:0003914!3.57e-08!118;UBERON:0000481!1.98e-07!347;UBERON:0001017!2.26e-07!82;UBERON:0007625!3.81e-07!11;UBERON:0000062!3.88e-07!511;UBERON:0000922!3.97e-07!612;UBERON:0002050!5.09e-07!605;UBERON:0005423!5.09e-07!605;UBERON:0001048!6.08e-07!168;UBERON:0000923!9.56e-07!604;UBERON:0005291!9.56e-07!604;UBERON:0006598!9.56e-07!604;UBERON:0002532!9.56e-07!604 | |ontology_enrichment_uberon=UBERON:0007023!6.90e-18!115;UBERON:0000477!9.10e-15!286;UBERON:0004111!1.40e-14!241;UBERON:0000119!1.18e-13!312;UBERON:0000483!1.88e-13!309;UBERON:0000025!4.44e-12!194;UBERON:0000467!5.37e-11!625;UBERON:0000480!7.70e-11!626;UBERON:0003075!8.88e-10!86;UBERON:0007284!8.88e-10!86;UBERON:0000468!4.61e-09!659;UBERON:0002346!8.12e-09!90;UBERON:0005743!2.34e-08!86;UBERON:0003914!3.57e-08!118;UBERON:0000481!1.98e-07!347;UBERON:0001017!2.26e-07!82;UBERON:0007625!3.81e-07!11;UBERON:0000062!3.88e-07!511;UBERON:0000922!3.97e-07!612;UBERON:0002050!5.09e-07!605;UBERON:0005423!5.09e-07!605;UBERON:0001048!6.08e-07!168;UBERON:0000923!9.56e-07!604;UBERON:0005291!9.56e-07!604;UBERON:0006598!9.56e-07!604;UBERON:0002532!9.56e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.57e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0007625;2.57e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.36e-08,114;UBERON:0001048,8.72e-08,160;UBERON:0003103,1.57e-07,68;UBERON:0003914,2.23e-07,117;UBERON:0007625,3.61e-07,11;UBERON:0001009,8.11e-07,112 | |||
|phase1_expression=0,0,2.53717927372748,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0.816002764977012,1.56727360739044,4.86601178122796,3.14811177667634,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,19.5045493051169,14.75541891348,9.07824189089065,0,0.50133791063589,3.0417768981773,0.795285947051099,0.486634870302636,6.14476311566441,5.32150553910154,3.16205228495254,1.44076983047484,0,0,2.59637914923747,2.96020553408754,1.59549552622638,0,0,0,0.198762407366705,0,0.347140501607594,0,1.25849830862972,1.92582629358047,0.208994966536811,17.313922864345,29.1728335403102,13.0541038978221,2.81980521976403,3.04108842287405,2.19655851793353,5.8826092855339,3.24056779152704,12.9484606011916,6.06229306090659,4.0540132973996,0,0.949265659568129,1.46561395144326,0,0,0,0,0.25326102332916,1.05927344650575,6.3104056564739,1.06400514659507,0.560677600142307,0,0.98667019366864,4.66816553099649,0.269421344139376,1.30769522490767,0.605429710579726,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,1.47461838108027,0.179389635688862,0,0.635795703478686,0,0.309157587715317,0,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0.738155454624648,0,3.7041661019826,2.94017422771084,6.33775174109154,3.9313088667105,3.54473944008842,0,0,7.3774158428366,0,0,0,0,0,0,5.77325368101093,6.83989389352953,11.3886433408747,4.61972632835436,2.77791307545966,5.32711626256875,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61576041299968,0.36669142910475,0.387815147273333,0,0,1.06375246633948,0,0.257207374262142,0,0,3.14551586047925,0,0,0,3.55391948742546,0,28.9381801977203,10.4584015032035,28.3923294957042,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,6.86055485400651,5.20559415430487,1.54657762555539,1.50764638800914,1.27587750330633,0,0,0,0.49076596687656,0,0,0.415941723061614,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,2.17836553734692,0,0.321707842287215,1.48418066444991,0.154209693802656,1.24293207719189,1.23190734020714,1.03850885836724,0.348631135379878,0,1.20303882181971,0,1.26295892981067,0.182091168006717,0.393373244878272,0,1.30926073077505,0.784349769176855,0,1.58327443339314,1.13733384070897,0.510281115829547,1.0795795805107,0,1.08378575017541,0.501689773854853,0.509752546090077,0,0,0,0,3.07740150139667,0.656029291399411,0.976135183992909,3.81251743096572,2.38080608527693,3.96045599618822,0,0,6.42735719376638,0.386682873168488,0.770243085573222,1.07452572308291,0.137836572484531,2.57808587683857,0.580066775656914,0.511359764496605,1.78064071293475,0.165284915360978,0,0.255225424989168,0.10115778085555,0,4.09256050879832,0,0,0,0,0,0,0.372158369359667,0,1.71567174531442,0,0,0.318203247925937,0,1.2591072030832,3.56898138656871,2.35624804691373,0,0,0,0,0.487426979262569,0,0.682499557039929,2.12108147930569,0,0,0,0,0,0,0,0.92947049429925,0,0.573645408816206,0,0,0,0.844430541190656,4.61012850143863,0,0,0.192444225451024,0,0,5.17790904272285,0,0,0.443430153536676,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0.383010740264733,3.17510374085824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04935025439248,0.37428108081644,3.51619630252546,0,0.222886768554957,0,0,0,0,0.994147647766298,0.703347082052564,0.222617410045812,15.1619564288619,0,1.39473591775749,1.65770349318689,0,0.920418142519393,0,0,0,0.179021174675609,0,1.38100767891707,0,0,0,0.556608588971108,0,0,0,0.724999575434793,0,4.32231205497703,0,0,0,0.520874984799877,0.885741385813839,0.60298219312704,0,0.331737779793674,0.295547618953547,0.438770794307945,0.762569244632931,0,3.23191085715948,0.113942055847001,0,0,0,1.91400695839152,1.28236630762607,3.19820865611181,0,0,0.664846727600626,0,0,0,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,2.12298154808014,0,0.889563386041866,1.97702302314405,3.34150238417457,0.808813595768125,2.40773294189637,0.234264445725339,0,1.36965233252463,0,3.55125962564451,1.20990716048664,0.30607276163049,1.51647791108371,0,0,0,0,0,0,0.284609546029793,0,0,0,0,5.94070672022902,0,0,0,0.164230914106418,3.87956065953678,0,6.32746074185491,0,0,0.823040347426423,0,0.801588202515337,2.98834192635094,2.19790570540343,0,0,0,0,5.59136410044446,0,0.271808412147228,0.104602846312333,1.01998217636322,0.288950589901519,0.600420288709789,0.410716136675979,0,7.73577794555923,0,6.98206003180636,2.97908551215189,3.58936512288407,0.798716001995964,1.28767814440971,2.00854311697685,1.34366944973453,1.44119953416961,0,0.709048640765013,0.412079291905832,0.943649613958588,2.95282444544246,0,0,0.953423842781029,0,0,0,1.5748172408605,2.3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| ||
|short_description=p3@CFI | |short_description=p3@CFI | ||
}} | }} |
Latest revision as of 16:23, 24 September 2015
Short description: | p3@CFI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CFI_5end |
Coexpression cluster: | C4359_mesenchymal_Mesothelial_Endothelial_Cardiac_mesothelioma_myeloma_anaplastic |
Association with transcript: | 22bp_to_ENST00000394634, NM_000204, uc003hzr.3, uc003hzs.3, uc011cft.1_5end |
EntrezGene: | CFI |
HGNC: | 5394 |
UniProt: | P05156A8K3L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.65e-09 | 24 |
lymphangioblast | 1.78e-07 | 6 |
endothelial cell of lymphatic vessel | 1.78e-07 | 6 |
vascular lymphangioblast | 1.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.36e-08 | 114 |
primordium | 8.72e-08 | 160 |
compound organ | 1.57e-07 | 68 |
epithelial tube | 2.23e-07 | 117 |
pigment epithelium of eye | 3.61e-07 | 11 |
circulatory system | 8.11e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.39e-09 | 14 |