FFCP PHASE1:Hg19::chr1:78392508..78392544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=254bp_to_ENST00000464998_5end | |association_with_transcript=254bp_to_ENST00000464998_5end | ||
|cluster_id=chr1:78392508..78392544,+ | |||
|description=CAGE_peak_7_at_NEXN_5end | |description=CAGE_peak_7_at_NEXN_5end | ||
|id=chr1:78392508..78392544,+ | |id=chr1:78392508..78392544,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.13e-26!42;CL:0002087!3.31e-26!119;CL:0000037!1.44e-25!172;CL:0000566!1.44e-25!172;CL:0000860!3.75e-23!45;CL:0002032!5.43e-23!165;CL:0000837!5.43e-23!165;CL:0000988!1.99e-22!182;CL:0000738!2.04e-22!140;CL:0002031!2.94e-22!124;CL:0002194!1.37e-19!63;CL:0000576!1.37e-19!63;CL:0000040!1.37e-19!63;CL:0000559!1.37e-19!63;CL:0002009!2.42e-18!65;CL:0000839!5.17e-17!70;CL:0000766!1.34e-16!76;CL:0000557!1.76e-16!71;CL:0000763!2.83e-16!112;CL:0000049!2.83e-16!112;CL:0000945!5.77e-10!24;CL:0000826!5.77e-10!24;CL:0000134!2.93e-07!358;CL:0000838!4.88e-07!52;CL:0002393!5.17e-07!9;CL:0002397!5.17e-07!9;CL:0000236!5.74e-07!14;CL:0002320!6.88e-07!365 | |ontology_enrichment_celltype=CL:0002057!3.13e-26!42;CL:0002087!3.31e-26!119;CL:0000037!1.44e-25!172;CL:0000566!1.44e-25!172;CL:0000860!3.75e-23!45;CL:0002032!5.43e-23!165;CL:0000837!5.43e-23!165;CL:0000988!1.99e-22!182;CL:0000738!2.04e-22!140;CL:0002031!2.94e-22!124;CL:0002194!1.37e-19!63;CL:0000576!1.37e-19!63;CL:0000040!1.37e-19!63;CL:0000559!1.37e-19!63;CL:0002009!2.42e-18!65;CL:0000839!5.17e-17!70;CL:0000766!1.34e-16!76;CL:0000557!1.76e-16!71;CL:0000763!2.83e-16!112;CL:0000049!2.83e-16!112;CL:0000945!5.77e-10!24;CL:0000826!5.77e-10!24;CL:0000134!2.93e-07!358;CL:0000838!4.88e-07!52;CL:0002393!5.17e-07!9;CL:0002397!5.17e-07!9;CL:0000236!5.74e-07!14;CL:0002320!6.88e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.23e-29;33!CL:0002057;9.23e-29;33!CL:0000576;7.11e-27;48!CL:0000473;3.70e-21;39!CL:0000234;3.70e-21;39!CL:0000945;1.32e-15;24!CL:0000766;1.12e-13;69!CL:0002087;2.10e-13;104!CL:0000763;6.35e-12;100!CL:0000236;1.36e-10;13!CL:0000738;1.66e-09;136!CL:0000988;1.11e-08;177 | |ontology_enrichment_celltype_v019=CL:0000860;9.23e-29;33!CL:0002057;9.23e-29;33!CL:0000576;7.11e-27;48!CL:0000473;3.70e-21;39!CL:0000234;3.70e-21;39!CL:0000945;1.32e-15;24!CL:0000766;1.12e-13;69!CL:0002087;2.10e-13;104!CL:0000763;6.35e-12;100!CL:0000236;1.36e-10;13!CL:0000738;1.66e-09;136!CL:0000988;1.11e-08;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.52e-39,115;CL:0000037,2.54e-39,168;CL:0000860,1.24e-38,42;CL:0002057,1.24e-38,42;CL:0002032,3.25e-37,161;CL:0000837,3.25e-37,161;CL:0000988,2.20e-36,177;CL:0002031,2.11e-35,120;CL:0000473,7.88e-35,48;CL:0000234,7.88e-35,48;CL:0002194,2.78e-34,59;CL:0000576,2.78e-34,59;CL:0000040,2.78e-34,59;CL:0000559,2.78e-34,59;CL:0000738,9.84e-34,136;CL:0002009,8.00e-33,61;CL:0000839,1.45e-29,66;CL:0000557,5.70e-29,67;CL:0000763,1.59e-28,108;CL:0000049,1.59e-28,108;CL:0000766,7.07e-28,72;CL:0000945,6.98e-16,24;CL:0000826,6.98e-16,24;CL:0000236,3.35e-12,14;CL:0000134,5.73e-10,354;CL:0002320,1.85e-09,361;CL:0000838,1.58e-08,52;CL:0000542,2.78e-08,53;CL:0000051,2.78e-08,53;CL:0000219,1.08e-07,386;CL:0002393,1.16e-07,9;CL:0002397,1.16e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-25;42!CL:0000049;4.02e-09;108 | |ontology_enrichment_development_v019=CL:0002057;2.72e-25;42!CL:0000049;4.02e-09;108 | ||
|ontology_enrichment_disease=DOID:1240!5.47e-07!39 | |ontology_enrichment_disease=DOID:1240!5.47e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.42e-09;39!DOID:8692;2.83e-08;31 | |ontology_enrichment_disease_v019=DOID:1240;2.42e-09;39!DOID:8692;2.83e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,9.56e-12,39;DOID:2531,3.45e-09,51;DOID:0060083,3.45e-09,51;DOID:8692,1.53e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.09e-21!102;UBERON:0003061!7.09e-21!102;UBERON:0002193!4.18e-18!112;UBERON:0002371!3.98e-16!80;UBERON:0001474!9.86e-15!86;UBERON:0004765!2.33e-12!101;UBERON:0001434!2.33e-12!101;UBERON:0002405!1.28e-10!115;UBERON:0002204!1.57e-07!167;UBERON:0002384!2.02e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!7.09e-21!102;UBERON:0003061!7.09e-21!102;UBERON:0002193!4.18e-18!112;UBERON:0002371!3.98e-16!80;UBERON:0001474!9.86e-15!86;UBERON:0004765!2.33e-12!101;UBERON:0001434!2.33e-12!101;UBERON:0002405!1.28e-10!115;UBERON:0002204!1.57e-07!167;UBERON:0002384!2.02e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.85e-30,98;UBERON:0003061,1.85e-30,98;UBERON:0002371,1.01e-27,76;UBERON:0002193,1.91e-26,108;UBERON:0002405,4.31e-25,93;UBERON:0001474,6.59e-25,82;UBERON:0004765,9.51e-22,90;UBERON:0001434,1.59e-18,100;UBERON:0003081,1.04e-12,203;UBERON:0002384,7.37e-10,371;UBERON:0002204,3.08e-09,167 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0.251085279189606,6.72437970581971,7.63535481884495,6.53299484903538,1.18009283054671,0.383829398097213,0.464448369948228,0,0,0,0,0,2.64240395401362,1.10799081706375,0.601633342410425,0.651032612147555,0,0,1.03030227053675,0.145398238779565,0.377875943688809,0.727752183563449,0.232429036905685,0.822335776043652,1.54853185447552,4.02769349251011,5.63553554364021,7.80391358632331,1.37898272294647,0.645484683583826,0,0.376484679085209,0.272906150057846,1.57306439111559,10.1007684482398,4.17207735198922,5.11469700639233,6.92687730392104,7.97854630486527,7.6720455095885,8.41606792022894,2.8369261234557,4.9825779919646,4.52247597462138,4.17186334736161,7.60160956467908,28.4537766237683,13.2579948955523,32.912088293852,4.22510572623884,4.67729459923096,7.54771123830153,6.06574608191074,6.00707571366025,17.3583633632847,0.855038231223746,1.79025009479181,3.65328307529268,1.75996244461323,3.82297027883492,1.77901850772711,1.28019066769952,2.40237592221607,2.29900975981793,1.98313461835459,2.86216126360609,0.569212969109448,0,0,0,0,2.10707267820062,0.590129310341499,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.493313713811028,0,0,0.14828656316206,0.535081656179426,1.04535523804977,0.226618685395132,0,0,0.759059076058509,0,0,0,0.150575119077773,0.127986611154418,0,0.710331756132051,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0,0,0,0.324547393654683,0,0.132957960518865,0,4.0039643754609,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.662045904066094,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0.358779271377724,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0.504867548488229,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0.234004265139238,1.18904929830983,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,9.75140752743687,0.197030760201927,0.215627574859517,0.256686072559497,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,1.24782516918484,0.356857977594324,0.473107245101804,0.468565659970853,0,0,0,0,0,0.173767228936166,0,0,2.48121631347465,0.647142602455851,0.853820462427555,0,0,0,0.248107807818777,0.306923946576125,0,0.384417447767103,1.02341449813341,0.965123526861645,0,0.462629081407967,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0.546273504020151,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.721287081534056,0.27470839445503,0,0,0,0,0.193341436584244,0,0,0.275673144969061,0.322260734604821,0.435050081742686,0.170453254832202,0.801288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0.539617372749944,0,0.471249609382746,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,1.31178950409327,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0.764637207142375,1.70894156152249,1.19115887728894,0.822724546172388,1.29694662238543,1.08006287447623,0.79312517629427,0.106824071127473,0,2.45040215981032,0,9.08896041751603,16.6471913435289,0.318852545457645,0.997896857164083,0,0.635020748171649,0,3.36956613736151,13.4658460629583,0.783399478865116,0,0,12.0441056327775,17.9601739400032,4.68430861459359,1.71752672377882,5.22309299324379,6.26293102098765,6.84081481018825,2.9308214310306,0,1.23087398947712,0,0,2.81974010175699,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.422008249231538,0,0,0,0.796991953004279,0.276283915531148,0,0,0.984678443688556,0.622079175323615,0,0,1.53471711068062,0.690503839458535,0,3.33410970433911,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,7.15353087370155,0.31396051279005,0.664846727600626,0,0,0,0,0.476809736941136,0,0,0,0,0,1.94606641907346,0.611030144933625,0,0,0,0.134802265961354,0,0.702793337176017,0.547364367646998,0,0,0.394584402849391,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,3.42973390950322,0,0.873633341210151,0,0,0,0,1.16386819786103,0,0.225980740780532,0.274083849293502,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.547621515567972,0,0,0,1.95497680890578,3.66656678418694,0.717873024576814,0,1.28767814440971,2.23171457441873,0.403100834920358,0.720599767084807,0,0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| ||
|short_description=p7@NEXN | |short_description=p7@NEXN | ||
}} | }} |
Latest revision as of 07:44, 19 September 2015
Short description: | p7@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NEXN_5end |
Coexpression cluster: | NA |
Association with transcript: | 254bp_to_ENST00000464998_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.85e-30 | 98 |
blood island | 1.85e-30 | 98 |
bone marrow | 1.01e-27 | 76 |
hemolymphoid system | 1.91e-26 | 108 |
immune system | 4.31e-25 | 93 |
bone element | 6.59e-25 | 82 |
skeletal element | 9.51e-22 | 90 |
skeletal system | 1.59e-18 | 100 |
lateral plate mesoderm | 1.04e-12 | 203 |
connective tissue | 7.37e-10 | 371 |
musculoskeletal system | 3.08e-09 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.56e-12 | 39 |
hematologic cancer | 3.45e-09 | 51 |
immune system cancer | 3.45e-09 | 51 |
myeloid leukemia | 1.53e-08 | 31 |