FFCP PHASE1:Hg19::chr1:25876348..25876361,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:25876348..25876361,+
|short_description=p5@LDLRAP1
|description=CAGE_peak_5_at_LDLRAP1_5end
|association_with_transcript=-90bp_to_ENST00000485476_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26119 | |EntrezGene=26119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18640 | |HGNC=18640 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-90bp_to_ENST00000485476_5end | |||
|cluster_id=chr1:25876348..25876361,+ | |||
|coexpression_cluster_id=C169 | |||
|description=CAGE_peak_5_at_LDLRAP1_5end | |||
|id=chr1:25876348..25876361,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.50e-26!53;CL:0000051!7.50e-26!53;CL:0000838!3.50e-24!52;CL:0002032!6.48e-17!165;CL:0000837!6.48e-17!165;CL:0000037!9.48e-17!172;CL:0000566!9.48e-17!172;CL:0000084!1.91e-15!25;CL:0000827!1.91e-15!25;CL:0000988!3.60e-15!182;CL:0000791!7.59e-14!18;CL:0000789!7.59e-14!18;CL:0002420!7.59e-14!18;CL:0002419!7.59e-14!18;CL:0000790!7.59e-14!18;CL:0002087!1.68e-11!119;CL:0000945!4.13e-10!24;CL:0000826!4.13e-10!24;CL:0002031!9.25e-10!124;CL:0000625!9.92e-10!11;CL:0000738!1.35e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.04e-12;24!CL:0000815;2.48e-10;2!CL:0000792;2.48e-10;2!CL:0002677;2.48e-10;2!CL:0000542;1.97e-07;53!CL:0000898;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.44e-16,53;CL:0000051,2.44e-16,53;CL:0000945,1.66e-12,24;CL:0000826,1.66e-12,24;CL:0000838,2.22e-12,52;CL:0000815,3.58e-10,2;CL:0000792,3.58e-10,2;CL:0002677,3.58e-10,2;CL:0002032,1.99e-08,161;CL:0000837,1.99e-08,161;CL:0000037,4.74e-08,168;CL:0000988,1.32e-07,177;CL:0002087,2.83e-07,115;CL:0000898,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.97e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!9.00e-19!51;DOID:0060083!9.00e-19!51;DOID:1240!1.30e-13!39;DOID:8692!8.34e-12!31;DOID:0060058!4.08e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;8.94e-20;1!DOID:12603;2.71e-19;1!DOID:74;1.43e-10;2!DOID:0060058;3.03e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,8.95e-20,1;DOID:12603,4.69e-19,1;DOID:74,1.43e-10,2;DOID:2531,6.16e-09,51;DOID:0060083,6.16e-09,51;DOID:0060058,3.25e-08,10;DOID:1240,1.06e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@LDLRAP1 | |||
}} | }} |
Latest revision as of 03:32, 17 September 2015
Short description: | p5@LDLRAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LDLRAP1_5end |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | -90bp_to_ENST00000485476_5end |
EntrezGene: | LDLRAP1 |
HGNC: | 18640 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.44e-16 | 53 |
common lymphoid progenitor | 2.44e-16 | 53 |
lymphocyte of B lineage | 1.66e-12 | 24 |
pro-B cell | 1.66e-12 | 24 |
lymphoid lineage restricted progenitor cell | 2.22e-12 | 52 |
regulatory T cell | 3.58e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.58e-10 | 2 |
naive regulatory T cell | 3.58e-10 | 2 |
hematopoietic oligopotent progenitor cell | 1.99e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-08 | 161 |
hematopoietic stem cell | 4.74e-08 | 168 |
hematopoietic cell | 1.32e-07 | 177 |
nongranular leukocyte | 2.83e-07 | 115 |
naive T cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 8.95e-20 | 1 |
acute leukemia | 4.69e-19 | 1 |
hematopoietic system disease | 1.43e-10 | 2 |
hematologic cancer | 6.16e-09 | 51 |
immune system cancer | 6.16e-09 | 51 |
lymphoma | 3.25e-08 | 10 |
leukemia | 1.06e-07 | 39 |