FFCP PHASE1:Hg19::chr13:24144958..24144969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55504 | |EntrezGene=55504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11915 | |HGNC=11915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS68 | |UniProt=Q9NS68 | ||
|association_with_transcript=155bp_to_ENST00000403372_5end | |association_with_transcript=155bp_to_ENST00000403372_5end | ||
|cluster_id=chr13:24144958..24144969,+ | |||
|coexpression_cluster_id=C221 | |coexpression_cluster_id=C221 | ||
|description=CAGE_peak_10_at_TNFRSF19_5end | |description=CAGE_peak_10_at_TNFRSF19_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002563!1.25e-09!4;CL:0002253!5.47e-09!2 | |ontology_enrichment_celltype=CL:0002563!1.25e-09!4;CL:0002253!5.47e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.85e-24;12!CL:0000322;1.82e-07;3!CL:0000214;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0000182;2.85e-24;12!CL:0000322;1.82e-07;3!CL:0000214;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.94e-24,12;CL:0000223,7.23e-08,58;CL:0000322,1.82e-07,3;CL:0000214,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.97e-26;11!UBERON:0009497;1.93e-22;13!UBERON:0001041;3.73e-15;30!UBERON:0003104;1.52e-09;31 | |ontology_enrichment_development_v019=UBERON:0004161;1.97e-26;11!UBERON:0009497;1.93e-22;13!UBERON:0001041;3.73e-15;30!UBERON:0003104;1.52e-09;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.25e-19;1!DOID:1357;3.25e-19;1!DOID:3910;1.43e-10;2!DOID:7;2.70e-07;39 | |ontology_enrichment_disease_v019=DOID:0050619;3.25e-19;1!DOID:1357;3.25e-19;1!DOID:3910;1.43e-10;2!DOID:7;2.70e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.91e-19,1;DOID:1357,3.91e-19,1;DOID:3910,1.43e-10,2;DOID:7,1.04e-07,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007029;3.25e-19;1!UBERON:0001764;3.25e-19;1!UBERON:0001825;3.25e-19;1!UBERON:0002107;1.71e-15;19!UBERON:0006925;1.71e-15;19!UBERON:0002365;1.58e-13;31!UBERON:0002330;1.58e-13;31!UBERON:0002423;7.26e-12;25!UBERON:0004903;1.43e-10;2!UBERON:0002173;1.43e-10;2!UBERON:0002186;1.43e-10;2!UBERON:0002368;2.30e-08;33!UBERON:0004821;1.82e-07;3!UBERON:0007499;1.82e-07;3!UBERON:0003215;1.82e-07;3!UBERON:0010368;1.82e-07;3!UBERON:0009911;1.82e-07;3!UBERON:0002299;1.82e-07;3!UBERON:0006524;1.82e-07;3!UBERON:0008874;1.82e-07;3!UBERON:0002169;1.82e-07;3!UBERON:0004894;1.82e-07;3!UBERON:0006915;2.79e-07;3!UBERON:0007616;2.79e-07;3!UBERON:0002217;2.79e-07;3!UBERON:0002018;2.79e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0007029;3.25e-19;1!UBERON:0001764;3.25e-19;1!UBERON:0001825;3.25e-19;1!UBERON:0002107;1.71e-15;19!UBERON:0006925;1.71e-15;19!UBERON:0002365;1.58e-13;31!UBERON:0002330;1.58e-13;31!UBERON:0002423;7.26e-12;25!UBERON:0004903;1.43e-10;2!UBERON:0002173;1.43e-10;2!UBERON:0002186;1.43e-10;2!UBERON:0002368;2.30e-08;33!UBERON:0004821;1.82e-07;3!UBERON:0007499;1.82e-07;3!UBERON:0003215;1.82e-07;3!UBERON:0010368;1.82e-07;3!UBERON:0009911;1.82e-07;3!UBERON:0002299;1.82e-07;3!UBERON:0006524;1.82e-07;3!UBERON:0008874;1.82e-07;3!UBERON:0002169;1.82e-07;3!UBERON:0004894;1.82e-07;3!UBERON:0006915;2.79e-07;3!UBERON:0007616;2.79e-07;3!UBERON:0002217;2.79e-07;3!UBERON:0002018;2.79e-07;3 | ||
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| ||
|short_description=p10@TNFRSF19 | |short_description=p10@TNFRSF19 | ||
}} | }} |
Latest revision as of 20:56, 16 September 2015
Short description: | p10@TNFRSF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TNFRSF19_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | 155bp_to_ENST00000403372_5end |
EntrezGene: | TNFRSF19 |
HGNC: | 11915 |
UniProt: | Q9NS68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.94e-24 | 12 |
endodermal cell | 7.23e-08 | 58 |
pneumocyte | 1.82e-07 | 3 |
synovial cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.91e-19 | 1 |
maxillary sinus cancer | 3.91e-19 | 1 |
lung adenocarcinoma | 1.43e-10 | 2 |
disease of anatomical entity | 1.04e-07 | 39 |