FFCP PHASE1:Hg19::chr1:25256175..25256228,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:25256175..25256228,-
|short_description=p5@RUNX3
|description=CAGE_peak_5_at_RUNX3_5end
|association_with_transcript=136bp_to_X79550_5end
|EntrezGene=864
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=864 | |EntrezGene=864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |HGNC=10473 | ||
|TSSclassifier=strong | |||
|UniProt=Q13761 | |UniProt=Q13761 | ||
|association_with_transcript=136bp_to_X79550_5end | |||
|cluster_id=chr1:25256175..25256228,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_5_at_RUNX3_5end | |||
|id=chr1:25256175..25256228,- | |||
|ontology_enrichment_celltype=CL:0000738!4.57e-57!140;CL:0000988!7.21e-57!182;CL:0000037!2.48e-56!172;CL:0000566!2.48e-56!172;CL:0002032!8.67e-53!165;CL:0000837!8.67e-53!165;CL:0002031!7.93e-48!124;CL:0002087!7.51e-47!119;CL:0000763!3.47e-28!112;CL:0000049!3.47e-28!112;CL:0002057!3.12e-26!42;CL:0000766!4.03e-26!76;CL:0000557!5.18e-24!71;CL:0000838!2.53e-23!52;CL:0000860!2.76e-23!45;CL:0000542!1.60e-22!53;CL:0000051!1.60e-22!53;CL:0000839!3.87e-22!70;CL:0002009!4.45e-22!65;CL:0002194!7.51e-21!63;CL:0000576!7.51e-21!63;CL:0000040!7.51e-21!63;CL:0000559!7.51e-21!63;CL:0000084!1.81e-17!25;CL:0000827!1.81e-17!25;CL:0000134!4.41e-15!358;CL:0002320!3.02e-14!365;CL:0000791!3.51e-14!18;CL:0000789!3.51e-14!18;CL:0002420!3.51e-14!18;CL:0002419!3.51e-14!18;CL:0000790!3.51e-14!18;CL:0000219!1.11e-13!390;CL:0000625!1.24e-09!11;CL:0002393!5.01e-07!9;CL:0002397!5.01e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.93e-23;25!CL:0000791;3.55e-21;18!CL:0000789;3.55e-21;18!CL:0002419;3.55e-21;18!CL:0000860;5.46e-20;33!CL:0002057;5.46e-20;33!CL:0000625;5.14e-16;11!CL:0000576;2.03e-14;48!CL:0002087;4.19e-14;104!CL:0000542;1.14e-13;53!CL:0000473;1.17e-13;39!CL:0000234;1.17e-13;39!CL:0000738;1.43e-11;136!CL:0000766;1.88e-10;69!CL:0000624;2.64e-08;6!CL:0002393;5.99e-08;6!CL:0002397;5.99e-08;6!CL:0000988;7.39e-08;177!CL:0000623;8.84e-08;3!CL:0000226;2.44e-07;3!CL:0000842;2.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.53e-52,136;CL:0000037,6.46e-46,168;CL:0000988,6.69e-44,177;CL:0002087,8.60e-44,115;CL:0002031,4.13e-42,120;CL:0002032,4.18e-42,161;CL:0000837,4.18e-42,161;CL:0000838,1.21e-25,52;CL:0000542,5.49e-25,53;CL:0000051,5.49e-25,53;CL:0000860,1.04e-24,42;CL:0002057,1.04e-24,42;CL:0000084,2.93e-23,25;CL:0000827,2.93e-23,25;CL:0000791,2.39e-21,18;CL:0000789,2.39e-21,18;CL:0002420,2.39e-21,18;CL:0002419,2.39e-21,18;CL:0000790,2.39e-21,18;CL:0000473,1.26e-20,48;CL:0000234,1.26e-20,48;CL:0000766,1.66e-18,72;CL:0000763,6.82e-18,108;CL:0000049,6.82e-18,108;CL:0000557,3.73e-17,67;CL:0002009,7.73e-17,61;CL:0000625,3.52e-16,11;CL:0000839,5.66e-15,66;CL:0002194,5.76e-15,59;CL:0000576,5.76e-15,59;CL:0000040,5.76e-15,59;CL:0000559,5.76e-15,59;CL:0000219,2.13e-13,386;CL:0000134,3.24e-13,354;CL:0002320,1.39e-12,361;CL:0000624,2.50e-08,6;CL:0000623,8.79e-08,3;CL:0000825,8.79e-08,3;CL:0000048,9.31e-08,427;CL:0000034,1.94e-07,441;CL:0000723,2.10e-07,433;CL:0000226,2.40e-07,3;CL:0000842,2.40e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.55e-21;18!CL:0002057;1.17e-18;42!CL:0000051;1.14e-13;53 | |||
|ontology_enrichment_disease=DOID:2531!1.10e-07!51;DOID:0060083!1.10e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-34!102;UBERON:0003061!1.31e-34!102;UBERON:0002193!5.83e-31!112;UBERON:0002371!1.64e-21!80;UBERON:0001474!9.91e-20!86;UBERON:0004765!1.06e-16!101;UBERON:0001434!1.06e-16!101;UBERON:0002405!6.20e-15!115;UBERON:0002384!2.89e-14!375;UBERON:0000178!9.18e-12!15;UBERON:0000179!9.18e-12!15;UBERON:0000463!9.18e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.16e-16;15!UBERON:0000179;2.16e-16;15!UBERON:0000463;2.16e-16;15!UBERON:0002390;4.69e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.05e-27,98;UBERON:0003061,9.05e-27,98;UBERON:0002193,1.78e-24,108;UBERON:0000178,1.62e-16,15;UBERON:0000179,1.62e-16,15;UBERON:0000463,1.62e-16,15;UBERON:0002371,3.11e-15,76;UBERON:0002405,6.86e-14,93;UBERON:0001474,1.66e-13,82;UBERON:0002384,2.68e-12,371;UBERON:0004765,1.40e-11,90;UBERON:0001434,1.24e-09,100;UBERON:0003081,2.25e-07,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,2.44522898393444,3.28402357799783,2.59745578335141,0.786728553697808,4.98978217526377,3.40595471295367,0,0,0,0.154934401160603,0.853015394924529,0.293600439334847,1.10799081706375,3.81034450193269,5.4252717678963,0,0.647787332037959,0.257575567634187,3.92575244704825,4.1566353805769,3.88134497900506,1.16214518452842,3.28934310417461,2.16794459626573,4.31538588483226,1.7931249457037,1.41889337933151,1.37898272294647,0.645484683583826,1.35426486594342,3.01187743268168,1.91034305040492,0.449446968890169,2.14258724659632,0.962787081228281,2.55734850319616,8.2462825046679,1.79517291859469,6.39337125799041,0.870627715885752,0,0.622822248995575,2.26123798731069,4.17186334736161,1.3031330682307,0.605399502633369,0.736555271975129,0.632924774881769,1.05627643155971,1.27562579979026,0.838634582033504,0.112328631146495,0.150176892841506,0.32145117339416,0.855038231223746,0.59675003159727,0.91332076882317,0,0,0,0,0.400395987036012,1.14950487990897,0,0,0.569212969109448,0.587237189370939,1.52909291250092,0,3.36305137788922,0.263384084775077,1.96709770113833,5.10913991573914,5.96244347098577,1.00311897234407,0.32592226663359,0.473447805734733,1.94826728407911,1.89397776704795,2.06224135232386,1.32920336750173,1.89562704635511,1.15282187753108,1.43065282315866,0.328875809207352,0.552700035571697,0.579606171470105,0.444859689486181,0.535081656179426,2.09071047609954,0.453237370790265,1.14966148080576,0.68725489096526,1.01207876807801,0.637130828648193,1.30216690771284,3.8018081777935,1.50575119077773,1.79181255616186,1.24930726552346,1.18388626022008,1.64225599384209,7.66105624253983,16.3138519427939,8.25499102131954,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469737994575059,0.485618833104395,0.280901613404497,0,0.859840221182376,0.723280468230358,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0,0.30648779579902,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0.492663237895943,0.616339038092582,0.829312462163088,1.29707958075265,1.2624243342638,1.20645999155121,2.29193055334967,0,3.4214489204541,0.719792448923265,1.20137223137567,1.71495859578347,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0.718874566474748,1.14861935834114,0,0,0,0,0.672510863961164,8.6693534488848,15.5251853898852,17.326309897766,0,0,0,0,0,1.49801404789436,2.99161459204025,0.828831026872071,0,0,0,0.831883446123229,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,2.65690239414175,0,0,0.195801157462741,0,2.48121631347465,5.82428342210265,7.04401881502733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,1.52927441428475,2.84823593587081,1.90585420366231,1.23408681925858,2.59389324477087,1.08006287447623,3.17250070517708,0,0,0,0,0,0.0711418433484141,0.318852545457645,0.798317485731266,1.1490322207942,0.635020748171649,0,0.561594356226918,0.228234679033192,0.313359791546046,0,1.01575066680962,1.76646882614069,1.21079824314629,0,0,0,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0.293016358543788,0.36408156524854,1.5602073798847,0,0,0,0,0,0,0,0.659215496907038,0.422250816255987,0.19924798825107,0.552567831062295,0,0,0.984678443688556,0.933118762985422,0,0,0.511572370226872,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0.689486746482929,0.291604613383254,1.21537496453305,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.494255755786011,0.835375596043643,0,0,0,0.91227394607833,0,0,0,0,0,0.442306057399416,0,0,0,0.661983911750998,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0.685209623233754,0.397429223405979,0,0,0,0.213452994739353,0.19980960958213,0,0.343609788497747,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,2.10309883423452,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,1.1248694577575,1.5476039091159,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0.146552233678082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| ||
|short_description=p5@RUNX3 | |||
}} | }} |
Latest revision as of 02:37, 17 September 2015
Short description: | p5@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RUNX3_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 136bp_to_X79550_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | Q13761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.05e-27 | 98 |
blood island | 9.05e-27 | 98 |
hemolymphoid system | 1.78e-24 | 108 |
blood | 1.62e-16 | 15 |
haemolymphatic fluid | 1.62e-16 | 15 |
organism substance | 1.62e-16 | 15 |
bone marrow | 3.11e-15 | 76 |
immune system | 6.86e-14 | 93 |
bone element | 1.66e-13 | 82 |
connective tissue | 2.68e-12 | 371 |
skeletal element | 1.40e-11 | 90 |
skeletal system | 1.24e-09 | 100 |
lateral plate mesoderm | 2.25e-07 | 203 |