FFCP PHASE1:Hg19::chr22:37638755..37638764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:37638755..37638764,+ | |||
|coexpression_cluster_id=C627 | |coexpression_cluster_id=C627 | ||
|description=CAGE_peak_at_chr22:37638755..37638764,+ | |description=CAGE_peak_at_chr22:37638755..37638764,+ | ||
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|ontology_enrichment_celltype=CL:0000738!3.10e-31!140;CL:0000988!6.64e-31!182;CL:0000766!9.73e-30!76;CL:0000037!6.21e-29!172;CL:0000566!6.21e-29!172;CL:0002032!1.00e-27!165;CL:0000837!1.00e-27!165;CL:0002057!2.29e-26!42;CL:0002031!2.73e-24!124;CL:0000860!3.22e-24!45;CL:0000763!1.99e-23!112;CL:0000049!1.99e-23!112;CL:0000839!5.71e-22!70;CL:0000557!1.45e-21!71;CL:0002087!1.20e-20!119;CL:0002274!1.75e-15!5;CL:0000457!1.75e-15!5;CL:0002191!1.75e-15!5;CL:0000097!1.75e-15!5;CL:0000831!1.75e-15!5;CL:0002028!1.75e-15!5;CL:0002393!1.81e-15!9;CL:0002397!1.81e-15!9;CL:0002194!2.47e-15!63;CL:0000576!2.47e-15!63;CL:0000040!2.47e-15!63;CL:0000559!2.47e-15!63;CL:0002009!1.06e-14!65;CL:0000080!4.84e-11!6;CL:0000094!1.92e-09!8;CL:0000081!2.19e-09!11;CL:0000163!2.05e-08!9;CL:0000134!9.06e-08!358;CL:0002320!2.08e-07!365 | |ontology_enrichment_celltype=CL:0000738!3.10e-31!140;CL:0000988!6.64e-31!182;CL:0000766!9.73e-30!76;CL:0000037!6.21e-29!172;CL:0000566!6.21e-29!172;CL:0002032!1.00e-27!165;CL:0000837!1.00e-27!165;CL:0002057!2.29e-26!42;CL:0002031!2.73e-24!124;CL:0000860!3.22e-24!45;CL:0000763!1.99e-23!112;CL:0000049!1.99e-23!112;CL:0000839!5.71e-22!70;CL:0000557!1.45e-21!71;CL:0002087!1.20e-20!119;CL:0002274!1.75e-15!5;CL:0000457!1.75e-15!5;CL:0002191!1.75e-15!5;CL:0000097!1.75e-15!5;CL:0000831!1.75e-15!5;CL:0002028!1.75e-15!5;CL:0002393!1.81e-15!9;CL:0002397!1.81e-15!9;CL:0002194!2.47e-15!63;CL:0000576!2.47e-15!63;CL:0000040!2.47e-15!63;CL:0000559!2.47e-15!63;CL:0002009!1.06e-14!65;CL:0000080!4.84e-11!6;CL:0000094!1.92e-09!8;CL:0000081!2.19e-09!11;CL:0000163!2.05e-08!9;CL:0000134!9.06e-08!358;CL:0002320!2.08e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.57e-36;5!CL:0000163;1.16e-20;9!CL:0000766;8.41e-13;69!CL:0000771;3.34e-11;2!CL:0000094;6.28e-11;8!CL:0000081;3.37e-08;11!CL:0000775;5.18e-08;3!CL:0000875;6.78e-08;3!CL:0002396;6.78e-08;3 | |ontology_enrichment_celltype_v019=CL:0000097;1.57e-36;5!CL:0000163;1.16e-20;9!CL:0000766;8.41e-13;69!CL:0000771;3.34e-11;2!CL:0000094;6.28e-11;8!CL:0000081;3.37e-08;11!CL:0000775;5.18e-08;3!CL:0000875;6.78e-08;3!CL:0002396;6.78e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.24e-36,5;CL:0002028,1.24e-36,5;CL:0000766,1.31e-21,72;CL:0000163,1.02e-20,9;CL:0000763,2.35e-14,108;CL:0000049,2.35e-14,108;CL:0000839,2.61e-14,66;CL:0000557,4.27e-14,67;CL:0000738,2.48e-11,136;CL:0000771,3.35e-11,2;CL:0000094,6.29e-11,8;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,4.31e-09,168;CL:0000988,1.32e-08,177;CL:0000081,3.37e-08,11;CL:0000775,5.18e-08,3;CL:0000860,7.10e-08,42;CL:0002057,7.10e-08,42;CL:0000875,7.26e-08,3;CL:0002396,7.26e-08,3;CL:0002031,8.44e-08,120;CL:0000473,6.32e-07,48;CL:0000234,6.32e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;6.30e-07;42 | |ontology_enrichment_development_v019=CL:0002057;6.30e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.90e-32!102;UBERON:0003061!6.90e-32!102;UBERON:0002193!7.27e-30!112;UBERON:0002371!2.24e-18!80;UBERON:0000178!1.53e-17!15;UBERON:0000179!1.53e-17!15;UBERON:0000463!1.53e-17!15;UBERON:0001474!1.27e-16!86;UBERON:0002405!6.34e-14!115;UBERON:0004765!3.62e-13!101;UBERON:0001434!3.62e-13!101;UBERON:0003081!1.39e-11!216;UBERON:0002384!6.41e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!6.90e-32!102;UBERON:0003061!6.90e-32!102;UBERON:0002193!7.27e-30!112;UBERON:0002371!2.24e-18!80;UBERON:0000178!1.53e-17!15;UBERON:0000179!1.53e-17!15;UBERON:0000463!1.53e-17!15;UBERON:0001474!1.27e-16!86;UBERON:0002405!6.34e-14!115;UBERON:0004765!3.62e-13!101;UBERON:0001434!3.62e-13!101;UBERON:0003081!1.39e-11!216;UBERON:0002384!6.41e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.77e-12,98;UBERON:0003061,1.77e-12,98;UBERON:0002371,2.01e-12,76;UBERON:0001474,1.66e-11,82;UBERON:0002193,2.67e-11,108;UBERON:0004765,1.79e-10,90;UBERON:0002405,3.95e-10,93;UBERON:0001434,2.08e-09,100 | |||
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| ||
|short_description=p@chr22:37638755..37638764,+ | |short_description=p@chr22:37638755..37638764,+ | ||
}} | }} |
Latest revision as of 20:56, 28 July 2015
Short description: | p@chr22:37638755..37638764, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37638755..37638764, + |
Coexpression cluster: | C627_Mast_Eosinophils_CD14_Neutrophils_Basophils_immature_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.24e-36 | 5 |
basophil mast progenitor cell | 1.24e-36 | 5 |
myeloid leukocyte | 1.31e-21 | 72 |
endocrine cell | 1.02e-20 | 9 |
myeloid cell | 2.35e-14 | 108 |
common myeloid progenitor | 2.35e-14 | 108 |
myeloid lineage restricted progenitor cell | 2.61e-14 | 66 |
granulocyte monocyte progenitor cell | 4.27e-14 | 67 |
leukocyte | 2.48e-11 | 136 |
eosinophil | 3.35e-11 | 2 |
granulocyte | 6.29e-11 | 8 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
hematopoietic stem cell | 4.31e-09 | 168 |
hematopoietic cell | 1.32e-08 | 177 |
blood cell | 3.37e-08 | 11 |
neutrophil | 5.18e-08 | 3 |
classical monocyte | 7.10e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.10e-08 | 42 |
non-classical monocyte | 7.26e-08 | 3 |
CD14-low, CD16-positive monocyte | 7.26e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.44e-08 | 120 |
defensive cell | 6.32e-07 | 48 |
phagocyte | 6.32e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.77e-12 | 98 |
blood island | 1.77e-12 | 98 |
bone marrow | 2.01e-12 | 76 |
bone element | 1.66e-11 | 82 |
hemolymphoid system | 2.67e-11 | 108 |
skeletal element | 1.79e-10 | 90 |
immune system | 3.95e-10 | 93 |
skeletal system | 2.08e-09 | 100 |