FFCP PHASE1:Hg19::chr5:150158295..150158337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85027 | |EntrezGene=85027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30248 | |HGNC=30248 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK027847_5end | |association_with_transcript=0bp_to_AK027847_5end | ||
|cluster_id=chr5:150158295..150158337,+ | |||
|description=CAGE_peak_1_at_C5orf62_5end | |description=CAGE_peak_1_at_C5orf62_5end | ||
|id=chr5:150158295..150158337,+ | |id=chr5:150158295..150158337,+ | ||
|ontology_enrichment_celltype=CL:0000034!1.82e-25!444;CL:0000048!4.13e-24!430;CL:0000723!7.60e-23!436;CL:0000763!3.28e-21!112;CL:0000049!3.28e-21!112;CL:0000766!3.04e-18!76;CL:0002320!1.84e-17!365;CL:0000557!8.96e-17!71;CL:0000134!9.08e-17!358;CL:0000839!3.61e-16!70;CL:0002057!2.35e-15!42;CL:0002194!3.29e-15!63;CL:0000576!3.29e-15!63;CL:0000040!3.29e-15!63;CL:0000559!3.29e-15!63;CL:0002009!1.63e-14!65;CL:0000219!7.24e-14!390;CL:0000860!4.97e-12!45;CL:0002371!7.88e-11!591;CL:0000680!6.73e-10!57;CL:0000056!6.73e-10!57;CL:0000355!6.73e-10!57;CL:0000187!8.57e-09!54;CL:0000183!2.17e-08!59;CL:0000144!5.31e-08!625;CL:0000136!4.30e-07!15;CL:0000055!6.59e-07!180;CL:0000393!8.68e-07!60;CL:0000211!8.68e-07!60 | |ontology_enrichment_celltype=CL:0000034!1.82e-25!444;CL:0000048!4.13e-24!430;CL:0000723!7.60e-23!436;CL:0000763!3.28e-21!112;CL:0000049!3.28e-21!112;CL:0000766!3.04e-18!76;CL:0002320!1.84e-17!365;CL:0000557!8.96e-17!71;CL:0000134!9.08e-17!358;CL:0000839!3.61e-16!70;CL:0002057!2.35e-15!42;CL:0002194!3.29e-15!63;CL:0000576!3.29e-15!63;CL:0000040!3.29e-15!63;CL:0000559!3.29e-15!63;CL:0002009!1.63e-14!65;CL:0000219!7.24e-14!390;CL:0000860!4.97e-12!45;CL:0002371!7.88e-11!591;CL:0000680!6.73e-10!57;CL:0000056!6.73e-10!57;CL:0000355!6.73e-10!57;CL:0000187!8.57e-09!54;CL:0000183!2.17e-08!59;CL:0000144!5.31e-08!625;CL:0000136!4.30e-07!15;CL:0000055!6.59e-07!180;CL:0000393!8.68e-07!60;CL:0000211!8.68e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-14;33!CL:0002057;2.07e-14;33!CL:0000473;1.44e-13;39!CL:0000234;1.44e-13;39!CL:0000576;3.13e-11;48!CL:0000766;3.96e-10;69!CL:0000763;5.86e-09;100!CL:0000136;6.80e-07;13 | |ontology_enrichment_celltype_v019=CL:0000860;2.07e-14;33!CL:0002057;2.07e-14;33!CL:0000473;1.44e-13;39!CL:0000234;1.44e-13;39!CL:0000576;3.13e-11;48!CL:0000766;3.96e-10;69!CL:0000763;5.86e-09;100!CL:0000136;6.80e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.59e-27,441;CL:0000048,3.92e-26,427;CL:0000723,8.54e-25,433;CL:0000763,1.46e-23,108;CL:0000049,1.46e-23,108;CL:0000766,5.25e-21,72;CL:0000557,1.79e-19,67;CL:0002320,2.62e-19,361;CL:0000839,7.37e-19,66;CL:0000134,1.38e-18,354;CL:0002194,5.51e-18,59;CL:0000576,5.51e-18,59;CL:0000040,5.51e-18,59;CL:0000559,5.51e-18,59;CL:0002009,4.15e-17,61;CL:0000473,4.73e-17,48;CL:0000234,4.73e-17,48;CL:0000219,2.01e-15,386;CL:0000860,2.34e-15,42;CL:0002057,2.34e-15,42;CL:0000680,1.02e-09,58;CL:0000056,1.02e-09,58;CL:0000355,1.02e-09,58;CL:0000187,1.26e-08,55;CL:0000037,3.35e-07,168;CL:0000136,4.29e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-11;42!CL:0000049;1.46e-07;108 | |ontology_enrichment_development_v019=CL:0002057;2.23e-11;42!CL:0000049;1.46e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.56e-26!167;UBERON:0002371!3.96e-19!80;UBERON:0002384!3.61e-18!375;UBERON:0002390!9.25e-18!102;UBERON:0003061!9.25e-18!102;UBERON:0001474!4.17e-16!86;UBERON:0004765!4.77e-16!101;UBERON:0001434!4.77e-16!101;UBERON:0002193!9.74e-15!112;UBERON:0004290!4.11e-12!70;UBERON:0000914!1.89e-11!83;UBERON:0002329!1.89e-11!83;UBERON:0003077!1.89e-11!83;UBERON:0003059!1.89e-11!83;UBERON:0007282!1.89e-11!83;UBERON:0009618!1.89e-11!83;UBERON:0007285!1.89e-11!83;UBERON:0002405!1.41e-10!115;UBERON:0003081!1.75e-10!216;UBERON:0001134!1.22e-09!61;UBERON:0002036!1.22e-09!61;UBERON:0003082!1.22e-09!61;UBERON:0000486!1.30e-09!82;UBERON:0002385!2.87e-09!63;UBERON:0001015!2.87e-09!63;UBERON:0000383!2.87e-09!63;UBERON:0000926!1.67e-08!448;UBERON:0004120!1.67e-08!448;UBERON:0006603!1.67e-08!448;UBERON:0001013!4.82e-07!14 | |ontology_enrichment_uberon=UBERON:0002204!2.56e-26!167;UBERON:0002371!3.96e-19!80;UBERON:0002384!3.61e-18!375;UBERON:0002390!9.25e-18!102;UBERON:0003061!9.25e-18!102;UBERON:0001474!4.17e-16!86;UBERON:0004765!4.77e-16!101;UBERON:0001434!4.77e-16!101;UBERON:0002193!9.74e-15!112;UBERON:0004290!4.11e-12!70;UBERON:0000914!1.89e-11!83;UBERON:0002329!1.89e-11!83;UBERON:0003077!1.89e-11!83;UBERON:0003059!1.89e-11!83;UBERON:0007282!1.89e-11!83;UBERON:0009618!1.89e-11!83;UBERON:0007285!1.89e-11!83;UBERON:0002405!1.41e-10!115;UBERON:0003081!1.75e-10!216;UBERON:0001134!1.22e-09!61;UBERON:0002036!1.22e-09!61;UBERON:0003082!1.22e-09!61;UBERON:0000486!1.30e-09!82;UBERON:0002385!2.87e-09!63;UBERON:0001015!2.87e-09!63;UBERON:0000383!2.87e-09!63;UBERON:0000926!1.67e-08!448;UBERON:0004120!1.67e-08!448;UBERON:0006603!1.67e-08!448;UBERON:0001013!4.82e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.49e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0001013;4.49e-07;14 | ||
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| ||
|short_description=p1@C5orf62 | |short_description=p1@C5orf62 | ||
}} | }} |
Latest revision as of 06:17, 16 September 2015
Short description: | p1@C5orf62 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C5orf62_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK027847_5end |
EntrezGene: | C5orf62 |
HGNC: | 30248 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.59e-27 | 441 |
multi fate stem cell | 3.92e-26 | 427 |
somatic stem cell | 8.54e-25 | 433 |
myeloid cell | 1.46e-23 | 108 |
common myeloid progenitor | 1.46e-23 | 108 |
myeloid leukocyte | 5.25e-21 | 72 |
granulocyte monocyte progenitor cell | 1.79e-19 | 67 |
connective tissue cell | 2.62e-19 | 361 |
myeloid lineage restricted progenitor cell | 7.37e-19 | 66 |
mesenchymal cell | 1.38e-18 | 354 |
monopoietic cell | 5.51e-18 | 59 |
monocyte | 5.51e-18 | 59 |
monoblast | 5.51e-18 | 59 |
promonocyte | 5.51e-18 | 59 |
macrophage dendritic cell progenitor | 4.15e-17 | 61 |
defensive cell | 4.73e-17 | 48 |
phagocyte | 4.73e-17 | 48 |
motile cell | 2.01e-15 | 386 |
classical monocyte | 2.34e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-15 | 42 |
muscle precursor cell | 1.02e-09 | 58 |
myoblast | 1.02e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.02e-09 | 58 |
muscle cell | 1.26e-08 | 55 |
hematopoietic stem cell | 3.35e-07 | 168 |
fat cell | 4.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.74e-28 | 167 |
bone marrow | 7.01e-22 | 76 |
connective tissue | 4.84e-20 | 371 |
hematopoietic system | 5.28e-20 | 98 |
blood island | 5.28e-20 | 98 |
mesoderm | 3.85e-19 | 315 |
mesoderm-derived structure | 3.85e-19 | 315 |
presumptive mesoderm | 3.85e-19 | 315 |
skeletal element | 4.41e-19 | 90 |
bone element | 1.97e-18 | 82 |
skeletal system | 2.61e-18 | 100 |
hemolymphoid system | 1.45e-16 | 108 |
immune system | 2.78e-16 | 93 |
lateral plate mesoderm | 1.33e-12 | 203 |
somite | 6.26e-12 | 71 |
presomitic mesoderm | 6.26e-12 | 71 |
presumptive segmental plate | 6.26e-12 | 71 |
dermomyotome | 6.26e-12 | 71 |
trunk paraxial mesoderm | 6.26e-12 | 71 |
paraxial mesoderm | 1.80e-11 | 72 |
presumptive paraxial mesoderm | 1.80e-11 | 72 |
dense mesenchyme tissue | 4.92e-11 | 73 |
epithelial vesicle | 1.11e-10 | 78 |
multilaminar epithelium | 1.74e-09 | 83 |
skeletal muscle tissue | 1.79e-09 | 62 |
striated muscle tissue | 1.79e-09 | 62 |
myotome | 1.79e-09 | 62 |
muscle tissue | 4.10e-09 | 64 |
musculature | 4.10e-09 | 64 |
musculature of body | 4.10e-09 | 64 |
adipose tissue | 4.81e-07 | 14 |