FFCP PHASE1:Hg19::chr14:55595767..55595782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3958 | |EntrezGene=3958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6563 | |HGNC=6563 | ||
|TSSclassifier=strong | |||
|UniProt=P17931 | |UniProt=P17931 | ||
|association_with_transcript=5bp_to_ENST00000254301_5end | |association_with_transcript=5bp_to_ENST00000254301_5end | ||
|cluster_id=chr14:55595767..55595782,+ | |||
|description=CAGE_peak_5_at_LGALS3_5end | |description=CAGE_peak_5_at_LGALS3_5end | ||
|id=chr14:55595767..55595782,+ | |id=chr14:55595767..55595782,+ | ||
|ontology_enrichment_celltype=CL:0000839!4.96e-17!70;CL:0000766!1.66e-15!76;CL:0000557!6.26e-15!71;CL:0002194!6.86e-15!63;CL:0000576!6.86e-15!63;CL:0000040!6.86e-15!63;CL:0000559!6.86e-15!63;CL:0002009!4.20e-14!65;CL:0000860!4.34e-14!45;CL:0002057!1.68e-13!42;CL:0002031!5.52e-12!124;CL:0000738!6.04e-11!140;CL:0002087!2.85e-10!119 | |ontology_enrichment_celltype=CL:0000839!4.96e-17!70;CL:0000766!1.66e-15!76;CL:0000557!6.26e-15!71;CL:0002194!6.86e-15!63;CL:0000576!6.86e-15!63;CL:0000040!6.86e-15!63;CL:0000559!6.86e-15!63;CL:0002009!4.20e-14!65;CL:0000860!4.34e-14!45;CL:0002057!1.68e-13!42;CL:0002031!5.52e-12!124;CL:0000738!6.04e-11!140;CL:0002087!2.85e-10!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.04e-15;33!CL:0002057;5.04e-15;33!CL:0000473;1.53e-13;39!CL:0000234;1.53e-13;39!CL:0000766;1.34e-09;69!CL:0000576;5.83e-08;48 | |ontology_enrichment_celltype_v019=CL:0000860;5.04e-15;33!CL:0002057;5.04e-15;33!CL:0000473;1.53e-13;39!CL:0000234;1.53e-13;39!CL:0000766;1.34e-09;69!CL:0000576;5.83e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,4.75e-16,66;CL:0000557,1.09e-15,67;CL:0000766,3.86e-15,72;CL:0000473,5.79e-15,48;CL:0000234,5.79e-15,48;CL:0000860,1.39e-14,42;CL:0002057,1.39e-14,42;CL:0002194,3.85e-14,59;CL:0000576,3.85e-14,59;CL:0000040,3.85e-14,59;CL:0000559,3.85e-14,59;CL:0002009,1.91e-13,61;CL:0002031,1.15e-11,120;CL:0000738,1.72e-10,136;CL:0002087,9.82e-10,115;CL:0000763,1.77e-07,108;CL:0000049,1.77e-07,108;CL:0002032,7.76e-07,161;CL:0000837,7.76e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;4.53e-12;42 | |ontology_enrichment_development_v019=CL:0002057;4.53e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.89e-15!112;UBERON:0002390!4.94e-14!102;UBERON:0003061!4.94e-14!102;UBERON:0002371!4.97e-12!80;UBERON:0001474!1.12e-11!86;UBERON:0004765!8.69e-10!101;UBERON:0001434!8.69e-10!101;UBERON:0002405!1.52e-08!115 | |ontology_enrichment_uberon=UBERON:0002193!7.89e-15!112;UBERON:0002390!4.94e-14!102;UBERON:0003061!4.94e-14!102;UBERON:0002371!4.97e-12!80;UBERON:0001474!1.12e-11!86;UBERON:0004765!8.69e-10!101;UBERON:0001434!8.69e-10!101;UBERON:0002405!1.52e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.02e-08;10!UBERON:0000158;8.02e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0005631;8.02e-08;10!UBERON:0000158;8.02e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.56e-14,108;UBERON:0002371,6.20e-14,76;UBERON:0002405,6.32e-14,93;UBERON:0002390,9.35e-14,98;UBERON:0003061,9.35e-14,98;UBERON:0001474,2.46e-13,82;UBERON:0004765,2.93e-12,90;UBERON:0001434,3.44e-10,100;UBERON:0003081,5.81e-07,203 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,1.74753097704138,1.31883489114227,0.618831764800233,0,0,0.602694528023977,0.730310090387373,0,0.61560529038394,0.204000691244253,2.19418305034661,0.572471974262113,0.821246550437305,0.251085279189606,0.0764134057479513,0.328402357799783,0.157421562627358,0.393364276848904,1.15148819429164,0.619264493264304,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,1.00272223735071,1.30206522429511,0.447830948479849,0.32389366601898,0,0.872389432677388,3.02300754951048,2.18325655069035,1.39457422143411,2.46700732813095,3.71647645074124,0.28769239232215,1.5369642391746,0.709446689665756,2.75796544589295,3.87290810150296,1.35426486594342,1.88242339542605,3.27487380069415,2.9214052977861,1.83650335422542,2.24650318953266,0.639337125799041,0.329851300186716,0.797854630486527,0.852449501065388,1.16083695451434,0.56738522469114,0.622822248995575,2.51248665256743,0,1.52032191293582,0.605399502633369,2.20966581592539,1.58231193720442,0.422510572623884,0,0.838634582033504,0.22465726229299,0.450530678524519,0.16072558669708,0.570025487482497,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,0,0.196709770113833,1.17903228824749,0.822405995998037,0,0,0,0,0.445641827540694,1.47302953737419,2.65840673500345,0.270803863765016,1.92136979588513,1.95089021339817,0.328875809207352,0,0,0,0,0,0,0.383220493601921,1.03088233644789,0,1.27426165729639,0,0.950452044448374,0,0.383959833463255,1.24930726552346,0.236777252044017,1.64225599384209,1.00803371612366,0.802320587350522,0.579297615531196,0,0,0.12786256184353,1.0843174571537,1.00267582127178,0,0,0.973269740605272,0.567208902984407,0,0,0.458426764241994,0,0,1.62273696827342,1.39303789839414,0.930705723632056,0,1.14398982156026,0,0.198762407366705,0,0,0,0,0.550236083880135,0,1.55050055501597,0.35576626268671,0.33472061276467,0,0,1.46437234528902,0,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.134710672069688,0.163461903113459,0.151357427644931,0,1.40592859100278,0,1.1409436430889,0.149448680551801,0.352303495931295,0.323745888736263,0.280901613404497,0,0.245668634623536,0.309977343527296,0,0.494533858557114,0,0,0.505008341862199,0.375355559615893,0,0,0.612975591598039,0,0.340296549480063,0.358779271377724,0.427114777637135,0.211931901159562,0,0.206105058476878,0,0.37223371266318,0,0.194874010322397,0,0.368199594569197,0.161646056818812,0,0.302256294682921,0.67824236924195,0.966304265816484,0.272746120590835,0.860413786167011,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0.828147600278907,0.674338760312407,0.964044119533928,0.330881918197182,0.653638332277218,0.237270619111097,0.674156540800822,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,1.96781501668982,0,0.329250856225877,2.24803506515239,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.927443239800615,0.117408694235822,1.44366447761074,3.24089858803628,0.951270761172991,0,1.71697232418975,0.492434012174795,0.702012795417713,0.297262324577456,0,0.335964256397719,0.141775097242386,0.358234090811393,0,0,0,0.880484340132261,5.80518723514162,4.75595846275973,5.30218220390796,0.888970520090367,0.763976851116555,0,0,0.719792448923265,0.300343057843917,1.14330573052231,0.336393253036082,0.43596006883328,0.22001485746285,0,0,0.845302752556,0.26593811658487,0,1.28603687131071,0,0,0,0,0,0.65147236858747,0,0,0,0,0.199945982364114,3.64871341923571,1.50677127429638,0,0.479249710983165,0,0,0,0,0.179060963239896,2.35378802386407,0,0.431255149719035,0.641715181398742,2.03275699377971,0,0.773288812777695,2.17771144934653,1.91381625495949,0.749007023947182,0,0.414415513436035,0.36807447515742,1.00034104211935,0.271265023699736,0,0.356857977594324,0,0.234282829985426,0.300946099727719,0,0,0,0.921845842708516,0.173767228936166,0.195801157462741,0.343143423810856,0,0.431428401637234,0.213455115606889,0.909382714338778,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0.246381468041427,0,0.116210378459959,2.05461064305758,0.200506470303285,0.368323955743585,0.229628896329213,0.182091168006717,0.262248829918848,1.35359883872224,0.15403067420883,1.56869953835371,0,0.422206515571503,0,0.340187410553031,0.215915916102139,1.54227252690289,0.270946437543853,0.501689773854853,1.78413391131527,3.3243040357149,0.447749509444357,0.877039506583738,0.784306353074702,0.256450125116389,0.328014645699706,0.650756789328606,0,0.0915694648183434,0,0,0.650060246036521,0,0.386682873168488,0.770243085573222,0.15350367472613,0,0.214840489736547,0.290033387828457,0.170453254832202,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,1.85938219718914,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.190630193923825,0.511795582622668,0,0.318203247925937,0,0.179872457583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| ||
|short_description=p5@LGALS3 | |short_description=p5@LGALS3 | ||
}} | }} |
Latest revision as of 15:54, 24 September 2015
Short description: | p5@LGALS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LGALS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000254301_5end |
EntrezGene: | LGALS3 |
HGNC: | 6563 |
UniProt: | P17931 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 4.75e-16 | 66 |
granulocyte monocyte progenitor cell | 1.09e-15 | 67 |
myeloid leukocyte | 3.86e-15 | 72 |
defensive cell | 5.79e-15 | 48 |
phagocyte | 5.79e-15 | 48 |
classical monocyte | 1.39e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-14 | 42 |
monopoietic cell | 3.85e-14 | 59 |
monocyte | 3.85e-14 | 59 |
monoblast | 3.85e-14 | 59 |
promonocyte | 3.85e-14 | 59 |
macrophage dendritic cell progenitor | 1.91e-13 | 61 |
hematopoietic lineage restricted progenitor cell | 1.15e-11 | 120 |
leukocyte | 1.72e-10 | 136 |
nongranular leukocyte | 9.82e-10 | 115 |
myeloid cell | 1.77e-07 | 108 |
common myeloid progenitor | 1.77e-07 | 108 |
hematopoietic oligopotent progenitor cell | 7.76e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.76e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.56e-14 | 108 |
bone marrow | 6.20e-14 | 76 |
immune system | 6.32e-14 | 93 |
hematopoietic system | 9.35e-14 | 98 |
blood island | 9.35e-14 | 98 |
bone element | 2.46e-13 | 82 |
skeletal element | 2.93e-12 | 90 |
skeletal system | 3.44e-10 | 100 |
lateral plate mesoderm | 5.81e-07 | 203 |