FFCP PHASE1:Hg19::chr1:246887738..246887749,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:246887738..246887749,+
|short_description=p7@SCCPDH
|description=CAGE_peak_7_at_SCCPDH_5end
|association_with_transcript=360bp_to_ENST00000366509_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51097 | |EntrezGene=51097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24275 | |HGNC=24275 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEA8 | |UniProt=E9PEA8 | ||
|association_with_transcript=360bp_to_ENST00000366509_5end | |||
|cluster_id=chr1:246887738..246887749,+ | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_7_at_SCCPDH_5end | |||
|id=chr1:246887738..246887749,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;5.60e-07;1!CL:0000313;5.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,8.18e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.91e-15;29!UBERON:0005425;1.54e-07;1 | |||
|ontology_enrichment_disease=DOID:14566!7.29e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.48e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.21e-41;9!UBERON:0001557;2.21e-41;9!UBERON:0000072;5.88e-11;37!UBERON:0000065;7.06e-09;44!UBERON:0001443;2.11e-08;11!UBERON:0000941;1.54e-07;1!UBERON:0001785;1.54e-07;1!UBERON:0002464;1.54e-07;1!UBERON:0004904;1.54e-07;1!UBERON:0001021;1.54e-07;1!UBERON:0000996;5.60e-07;1!UBERON:0004911;5.60e-07;1!UBERON:0002426;5.60e-07;1!UBERON:0003831;5.60e-07;1!UBERON:0003898;5.60e-07;1!UBERON:0004830;5.60e-07;1!UBERON:0003830;5.60e-07;1!UBERON:0005175;5.60e-07;1!UBERON:0001774;5.60e-07;1!UBERON:0001103;5.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.24e-41,9;UBERON:0001557,5.64e-19,19;UBERON:0008947,2.80e-11,38;UBERON:0003258,2.80e-11,38;UBERON:0000072,7.93e-09,47;UBERON:0001443,1.60e-08,11;UBERON:0000941,1.55e-07,1;UBERON:0001785,1.55e-07,1;UBERON:0002464,1.55e-07,1;UBERON:0004904,1.55e-07,1;UBERON:0001021,1.55e-07,1;UBERON:0003902,1.55e-07,1;UBERON:0005425,1.55e-07,1;UBERON:0000065,1.73e-07,54;UBERON:0002426,3.60e-07,1;UBERON:0003831,3.60e-07,1;UBERON:0003898,3.60e-07,1;UBERON:0004830,3.60e-07,1;UBERON:0003830,3.60e-07,1;UBERON:0005175,3.60e-07,1;UBERON:0001774,3.60e-07,1;UBERON:0001103,3.60e-07,1;UBERON:0010084,3.60e-07,1;UBERON:0000996,4.31e-07,1;UBERON:0004911,8.18e-07,1 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.281908808191942,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,0,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0.600182192168805,0,0,0,0,0,0,0.184099797284599,0.323292113637624,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,0,0.132529768321485,0.348581828608555,0.518305275076852,0,0,0,0.643240938192885,0,0,0,2.24782920075703,2.52877035117153,2.16909926895134,2.09558548191549,2.17879444092406,0.237270619111097,1.21348177344148,2.35465758150415,2.30848294167834,0,0,0,0,6.33775174109154,0.982827216677626,1.77236972004421,0,0.245976877086227,0.514703430895577,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.205654985406647,0,0.285826432630578,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0.410952645100767,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0.157702415033935,0.117141414992713,0,2.27407504055985,1.03473071292505,0,0.553107505625109,0.173767228936166,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0,0.280660094433074,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0.348631135379878,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0,0.15403067420883,0,0,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0,0,0.328014645699706,0.325378394664303,1.13345112812495,0,0,0,0,0,0.193341436584244,0,0.307007349452259,0.275673144969061,0.107420244868274,0,0.255679882248303,0,0.165284915360978,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0.354761064070598,0.422215270595328,0.987884678879706,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0.962479855263359,0.490080431962063,0,0.28853842595289,0.355709216742071,0.159426272728822,0.199579371432817,0.191505370132367,0.423347165447766,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0.390776190804081,0,1.23087398947712,0,0.66614393599564,1.4098700508785,0.18714054040822,0.73254089635947,0.36408156524854,0,0,0.95497793895076,0.593929361665277,0,0,0.140669416410513,0.222617410045812,0.16480387422676,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0,0,0.179736702294654,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0.260427761085233,0.524759999977174,1.44999915086959,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0.21787692703798,0,0.230850775511391,0.455768223388005,0,0,0,0.638002319463839,0.732780747214898,0,0,0.31396051279005,0.166211681900156,0,0,0.167821586975843,0,0,0.210998064528027,0.489698424477443,0.282706142867882,0,0,0.265372693510018,0,0.296521128680622,0,0.104421949505455,0.606610196826093,1.60515529459758,0.234264445725339,0.182454789215666,0,0.242780379534093,0,0,0,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0.416024019039416,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0.195551382734803,0.160317640503067,0.213452994739353,0,0,0,0.514784993585894,0.14405479798815,0.124252535565433,0,0.135904206073614,0.104602846312333,0.203996435272644,0.577901179803038,0.600420288709789,0.547621515567972,0,0,1.05154941711726,0,0,0,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0.164831716762333,0.13480708770837,0.0984274815147488,0.0846733320657845,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.104909176269996,0.105600336519406,21.5144807199414,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0.164185041498678,0,0,0.293104467356165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| ||
|short_description=p7@SCCPDH | |||
}} | }} |
Latest revision as of 23:05, 16 September 2015
Short description: | p7@SCCPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SCCPDH_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 360bp_to_ENST00000366509_5end |
EntrezGene: | SCCPDH |
HGNC: | 24275 |
UniProt: | E9PEA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 8.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.24e-41 | 9 |
upper respiratory tract | 5.64e-19 | 19 |
respiratory primordium | 2.80e-11 | 38 |
endoderm of foregut | 2.80e-11 | 38 |
segment of respiratory tract | 7.93e-09 | 47 |
chest | 1.60e-08 | 11 |
cranial nerve II | 1.55e-07 | 1 |
cranial nerve | 1.55e-07 | 1 |
nerve trunk | 1.55e-07 | 1 |
nerve connecting eye with brain | 1.55e-07 | 1 |
nerve | 1.55e-07 | 1 |
retinal neural layer | 1.55e-07 | 1 |
presumptive neural retina | 1.55e-07 | 1 |
respiratory tract | 1.73e-07 | 54 |
chest muscle | 3.60e-07 | 1 |
respiratory system muscle | 3.60e-07 | 1 |
skeletal muscle of trunk | 3.60e-07 | 1 |
respiratory system skeletal muscle | 3.60e-07 | 1 |
thoracic segment muscle | 3.60e-07 | 1 |
chest organ | 3.60e-07 | 1 |
muscle of trunk | 3.60e-07 | 1 |
diaphragm | 3.60e-07 | 1 |
future diaphragm | 3.60e-07 | 1 |
vagina | 4.31e-07 | 1 |
epithelium of female gonad | 8.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.18e-07 | 1 |