FFCP PHASE1:Hg19::chr20:33932174..33932186,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:33932174..33932186,- | |||
|coexpression_cluster_id=C4028 | |coexpression_cluster_id=C4028 | ||
|description=CAGE_peak_at_chr20:33932174..33932186,- | |description=CAGE_peak_at_chr20:33932174..33932186,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!1.24e-16!19;CL:0002097!4.07e-08!2;CL:0002588!5.64e-07!2 | |ontology_enrichment_celltype=CL:0000077!1.24e-16!19;CL:0002097!4.07e-08!2;CL:0002588!5.64e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.68e-24;19!CL:0002097;1.43e-15;2!CL:0000174;7.78e-11;3!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4 | |ontology_enrichment_celltype_v019=CL:0000077;2.68e-24;19!CL:0002097;1.43e-15;2!CL:0000174;7.78e-11;3!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.45e-24,19;CL:0002097,1.54e-15,2;CL:0000174,8.17e-11,3;CL:0000213,2.52e-08,58;CL:0000215,2.52e-08,58;CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4;CL:0000076,1.07e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.23e-07;5 | |ontology_enrichment_development_v019=UBERON:0007123;5.23e-07;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;7.78e-11;3!UBERON:0001235;7.78e-11;3!UBERON:0006858;7.78e-11;3!UBERON:0010077;2.35e-08;4!UBERON:0005389;2.35e-08;4!UBERON:0000484;2.35e-08;4!UBERON:0000965;2.35e-08;4!UBERON:0001803;2.35e-08;4!UBERON:0002046;5.23e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002369;7.78e-11;3!UBERON:0001235;7.78e-11;3!UBERON:0006858;7.78e-11;3!UBERON:0010077;2.35e-08;4!UBERON:0005389;2.35e-08;4!UBERON:0000484;2.35e-08;4!UBERON:0000965;2.35e-08;4!UBERON:0001803;2.35e-08;4!UBERON:0002046;5.23e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,8.17e-11,3;UBERON:0001235,8.17e-11,3;UBERON:0006858,8.17e-11,3;UBERON:0010077,2.61e-08,4;UBERON:0005389,2.61e-08,4;UBERON:0000484,2.61e-08,4;UBERON:0002546,2.61e-08,4;UBERON:0000965,2.61e-08,4;UBERON:0001803,2.61e-08,4;UBERON:0003073,2.61e-08,4;UBERON:0005426,2.61e-08,4;UBERON:0002046,5.08e-07,5;UBERON:0004117,5.08e-07,5;UBERON:0007689,5.08e-07,5;UBERON:0007123,5.08e-07,5;UBERON:0003091,5.08e-07,5 | |||
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| ||
|short_description=p@chr20:33932174..33932186,- | |short_description=p@chr20:33932174..33932186,- | ||
}} | }} |
Latest revision as of 13:24, 28 July 2015
Short description: | p@chr20:33932174..33932186, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33932174..33932186, - |
Coexpression cluster: | C4028_mesothelioma_anaplastic_Mesothelial_Neural_Aortic_pleomorphic_lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.45e-24 | 19 |
cortical cell of adrenal gland | 1.54e-15 | 2 |
steroid hormone secreting cell | 8.17e-11 | 3 |
lining cell | 2.52e-08 | 58 |
barrier cell | 2.52e-08 | 58 |
crystallin accumulating cell | 2.61e-08 | 4 |
vertebrate lens cell | 2.61e-08 | 4 |
lens epithelial cell | 2.61e-08 | 4 |
squamous epithelial cell | 1.07e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 8.17e-11 | 3 |
adrenal cortex | 8.17e-11 | 3 |
adrenal/interrenal gland | 8.17e-11 | 3 |
cuboidal epithelium | 2.61e-08 | 4 |
transparent eye structure | 2.61e-08 | 4 |
simple cuboidal epithelium | 2.61e-08 | 4 |
cranial placode | 2.61e-08 | 4 |
lens of camera-type eye | 2.61e-08 | 4 |
epithelium of lens | 2.61e-08 | 4 |
lens placode | 2.61e-08 | 4 |
lens vesicle | 2.61e-08 | 4 |
thyroid gland | 5.08e-07 | 5 |
pharyngeal pouch | 5.08e-07 | 5 |
thyroid diverticulum | 5.08e-07 | 5 |
pharyngeal pouch 2 | 5.08e-07 | 5 |
thyroid primordium | 5.08e-07 | 5 |