FFCP PHASE1:Hg19::chr9:13446472..13446510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000428006_5end | |association_with_transcript=-14bp_to_ENST00000428006_5end | ||
|cluster_id=chr9:13446472..13446510,+ | |||
|coexpression_cluster_id=C557 | |coexpression_cluster_id=C557 | ||
|description=CAGE_peak_1_at_ENST00000428006_5end | |description=CAGE_peak_1_at_ENST00000428006_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0005020!7.40e-14!6;CL:0002138!7.40e-14!6;CL:0005022!7.40e-14!6;CL:0002139!2.92e-12!24;CL:0000115!5.43e-10!35;CL:0002078!3.54e-08!44;CL:0002144!7.10e-08!3 | |ontology_enrichment_celltype=CL:0005020!7.40e-14!6;CL:0002138!7.40e-14!6;CL:0005022!7.40e-14!6;CL:0002139!2.92e-12!24;CL:0000115!5.43e-10!35;CL:0002078!3.54e-08!44;CL:0002144!7.10e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.36e-26;6!CL:0002144;2.73e-14;3!CL:0002139;1.72e-13;24!CL:0000115;2.69e-08;36 | |ontology_enrichment_celltype_v019=CL:0002138;2.36e-26;6!CL:0002144;2.73e-14;3!CL:0002139;1.72e-13;24!CL:0000115;2.69e-08;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.32e-26,6;CL:0002138,2.32e-26,6;CL:0005022,2.32e-26,6;CL:0002144,2.74e-14,3;CL:0002139,1.71e-13,24;CL:0000115,2.85e-10,36;CL:0002078,7.97e-08,45 | |||
|ontology_enrichment_development_v019=CL:0005022;2.36e-26;6 | |ontology_enrichment_development_v019=CL:0005022;2.36e-26;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.71e-21!115;UBERON:0002465!2.60e-13!10;UBERON:0001473!4.01e-10!8;UBERON:0004536!4.01e-10!8;UBERON:0006558!4.01e-10!8;UBERON:0001915!7.10e-08!3;UBERON:0001982!7.10e-08!3;UBERON:0004151!2.10e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!9.71e-21!115;UBERON:0002465!2.60e-13!10;UBERON:0001473!4.01e-10!8;UBERON:0004536!4.01e-10!8;UBERON:0006558!4.01e-10!8;UBERON:0001915!7.10e-08!3;UBERON:0001982!7.10e-08!3;UBERON:0004151!2.10e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002465;1.28e-20;10!UBERON:0001473;1.34e-19;8!UBERON:0004536;1.34e-19;8!UBERON:0006558;1.34e-19;8!UBERON:0010523;2.73e-14;3!UBERON:0001915;2.73e-14;3!UBERON:0001982;2.73e-14;3!UBERON:0004151;3.99e-13;3!UBERON:0000922;1.35e-11;49!UBERON:0002133;1.13e-09;2!UBERON:0002081;1.43e-09;2!UBERON:0005090;2.01e-09;2!UBERON:0001630;2.01e-09;2!UBERON:0003127;2.53e-09;2!UBERON:0002405;5.93e-09;27 | |ontology_enrichment_uberon_v019=UBERON:0002465;1.28e-20;10!UBERON:0001473;1.34e-19;8!UBERON:0004536;1.34e-19;8!UBERON:0006558;1.34e-19;8!UBERON:0010523;2.73e-14;3!UBERON:0001915;2.73e-14;3!UBERON:0001982;2.73e-14;3!UBERON:0004151;3.99e-13;3!UBERON:0000922;1.35e-11;49!UBERON:0002133;1.13e-09;2!UBERON:0002081;1.43e-09;2!UBERON:0005090;2.01e-09;2!UBERON:0001630;2.01e-09;2!UBERON:0003127;2.53e-09;2!UBERON:0002405;5.93e-09;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.15e-20,10;UBERON:0001473,1.32e-19,8;UBERON:0004536,1.32e-19,8;UBERON:0006558,1.32e-19,8;UBERON:0010523,2.74e-14,3;UBERON:0001915,2.74e-14,3;UBERON:0001982,2.74e-14,3;UBERON:0004151,2.42e-13,3;UBERON:0002133,1.18e-09,2;UBERON:0002081,1.29e-09,2;UBERON:0010227,1.29e-09,2;UBERON:0005090,2.33e-09,2;UBERON:0001630,2.33e-09,2;UBERON:0003127,2.43e-09,2;UBERON:0000055,9.45e-07,68 | |||
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| ||
|short_description=p1@ENST00000428006 | |short_description=p1@ENST00000428006 | ||
}} | }} |
Latest revision as of 23:42, 31 July 2015
Short description: | p1@ENST00000428006 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000428006_5end |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | -14bp_to_ENST00000428006_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.32e-26 | 6 |
endothelial cell of lymphatic vessel | 2.32e-26 | 6 |
vascular lymphangioblast | 2.32e-26 | 6 |
capillary endothelial cell | 2.74e-14 | 3 |
endothelial cell of vascular tree | 1.71e-13 | 24 |
endothelial cell | 2.85e-10 | 36 |
meso-epithelial cell | 7.97e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.15e-20 | 10 |
lymphatic vessel | 1.32e-19 | 8 |
lymph vasculature | 1.32e-19 | 8 |
lymphatic part of lymphoid system | 1.32e-19 | 8 |
microcirculatory vessel | 2.74e-14 | 3 |
endothelium of capillary | 2.74e-14 | 3 |
capillary | 2.74e-14 | 3 |
cardiac chamber | 2.42e-13 | 3 |
atrioventricular valve | 1.18e-09 | 2 |
cardiac atrium | 1.29e-09 | 2 |
future cardiac atrium | 1.29e-09 | 2 |
muscle structure | 2.33e-09 | 2 |
muscle organ | 2.33e-09 | 2 |
open tracheal system trachea | 2.43e-09 | 2 |
vessel | 9.45e-07 | 68 |