FFCP PHASE1:Hg19::chr5:149624858..149624884,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=815 | |EntrezGene=815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1460 | |HGNC=1460 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000351010,uc003lrs.2_5end | |association_with_transcript=6bp_to_ENST00000351010,uc003lrs.2_5end | ||
|cluster_id=chr5:149624858..149624884,- | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_3_at_CAMK2A_5end | |description=CAGE_peak_3_at_CAMK2A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.70e-10;65!UBERON:0003104;9.34e-07;31 | |ontology_enrichment_development_v019=UBERON:0006603;2.70e-10;65!UBERON:0003104;9.34e-07;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.17e-10;2 | |ontology_enrichment_disease_v019=DOID:114;1.17e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,8.96e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.92e-52!115;UBERON:0001049!1.27e-13!57;UBERON:0005068!1.27e-13!57;UBERON:0006241!1.27e-13!57;UBERON:0007135!1.27e-13!57;UBERON:0002020!7.74e-13!34;UBERON:0003528!7.74e-13!34;UBERON:0001869!3.03e-12!32;UBERON:0002619!3.04e-12!22;UBERON:0001017!3.14e-12!82;UBERON:0005743!4.57e-12!86;UBERON:0001950!6.74e-12!20;UBERON:0000955!7.32e-12!69;UBERON:0006238!7.32e-12!69;UBERON:0001893!2.97e-11!34;UBERON:0002616!9.08e-11!59;UBERON:0003075!1.46e-10!86;UBERON:0007284!1.46e-10!86;UBERON:0002346!1.81e-10!90;UBERON:0000956!2.26e-10!25;UBERON:0000203!2.26e-10!25;UBERON:0002791!2.33e-10!33;UBERON:0000073!4.25e-10!94;UBERON:0001016!4.25e-10!94;UBERON:0002780!1.49e-09!41;UBERON:0001890!1.49e-09!41;UBERON:0006240!1.49e-09!41;UBERON:0003080!3.27e-09!42;UBERON:0000153!8.46e-09!129;UBERON:0007811!8.46e-09!129;UBERON:0000033!3.82e-08!123;UBERON:0000481!7.28e-08!347;UBERON:0002298!2.03e-07!8;UBERON:0000475!8.72e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!5.92e-52!115;UBERON:0001049!1.27e-13!57;UBERON:0005068!1.27e-13!57;UBERON:0006241!1.27e-13!57;UBERON:0007135!1.27e-13!57;UBERON:0002020!7.74e-13!34;UBERON:0003528!7.74e-13!34;UBERON:0001869!3.03e-12!32;UBERON:0002619!3.04e-12!22;UBERON:0001017!3.14e-12!82;UBERON:0005743!4.57e-12!86;UBERON:0001950!6.74e-12!20;UBERON:0000955!7.32e-12!69;UBERON:0006238!7.32e-12!69;UBERON:0001893!2.97e-11!34;UBERON:0002616!9.08e-11!59;UBERON:0003075!1.46e-10!86;UBERON:0007284!1.46e-10!86;UBERON:0002346!1.81e-10!90;UBERON:0000956!2.26e-10!25;UBERON:0000203!2.26e-10!25;UBERON:0002791!2.33e-10!33;UBERON:0000073!4.25e-10!94;UBERON:0001016!4.25e-10!94;UBERON:0002780!1.49e-09!41;UBERON:0001890!1.49e-09!41;UBERON:0006240!1.49e-09!41;UBERON:0003080!3.27e-09!42;UBERON:0000153!8.46e-09!129;UBERON:0007811!8.46e-09!129;UBERON:0000033!3.82e-08!123;UBERON:0000481!7.28e-08!347;UBERON:0002298!2.03e-07!8;UBERON:0000475!8.72e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.73e-11;2!UBERON:0001630;1.73e-11;2!UBERON:0000341;3.41e-11;2!UBERON:0007100;5.68e-11;25!UBERON:0001829;3.98e-10;2!UBERON:0001723;7.58e-08;3!UBERON:0001033;7.58e-08;3!UBERON:0004151;2.19e-07;3!UBERON:0003978;3.31e-07;3!UBERON:0000946;3.31e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0005090;1.73e-11;2!UBERON:0001630;1.73e-11;2!UBERON:0000341;3.41e-11;2!UBERON:0007100;5.68e-11;25!UBERON:0001829;3.98e-10;2!UBERON:0001723;7.58e-08;3!UBERON:0001033;7.58e-08;3!UBERON:0004151;2.19e-07;3!UBERON:0003978;3.31e-07;3!UBERON:0000946;3.31e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.79e-25,114;UBERON:0005090,1.73e-11,2;UBERON:0001630,1.73e-11,2;UBERON:0000341,3.17e-11,2;UBERON:0001829,2.36e-10,2;UBERON:0007100,3.92e-10,27;UBERON:0003103,2.57e-09,68;UBERON:0001723,7.46e-08,3;UBERON:0001033,7.46e-08,3;UBERON:0010056,7.46e-08,3;UBERON:0004151,1.75e-07,3;UBERON:0003978,3.76e-07,3;UBERON:0009751,3.76e-07,3;UBERON:0000946,3.76e-07,3;UBERON:0002523,3.76e-07,3;UBERON:0005983,3.76e-07,3;UBERON:0002165,3.76e-07,3;UBERON:0002062,3.76e-07,3;UBERON:0007280,3.76e-07,3 | |||
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| ||
|short_description=p3@CAMK2A | |short_description=p3@CAMK2A | ||
}} | }} |
Latest revision as of 03:31, 16 September 2015
Short description: | p3@CAMK2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAMK2A_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 6bp_to_ENST00000351010, uc003lrs.2_5end |
EntrezGene: | CAMK2A |
HGNC: | 1460 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.79e-25 | 114 |
muscle structure | 1.73e-11 | 2 |
muscle organ | 1.73e-11 | 2 |
throat | 3.17e-11 | 2 |
major salivary gland | 2.36e-10 | 2 |
primary circulatory organ | 3.92e-10 | 27 |
compound organ | 2.57e-09 | 68 |
tongue | 7.46e-08 | 3 |
gustatory system | 7.46e-08 | 3 |
future tongue | 7.46e-08 | 3 |
cardiac chamber | 1.75e-07 | 3 |
valve | 3.76e-07 | 3 |
cardiac mesenchyme | 3.76e-07 | 3 |
cardial valve | 3.76e-07 | 3 |
tunica intima | 3.76e-07 | 3 |
heart layer | 3.76e-07 | 3 |
endocardium | 3.76e-07 | 3 |
endocardial cushion | 3.76e-07 | 3 |
presumptive endocardium | 3.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.96e-11 | 2 |