FFCP PHASE1:Hg19::chr1:180240503..180240504,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:180240503..180240504,- | |||
|coexpression_cluster_id=C412 | |coexpression_cluster_id=C412 | ||
|description=CAGE_peak_at_chr1:180240503..180240504,- | |description=CAGE_peak_at_chr1:180240503..180240504,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002149!2.19e-12!6;CL:0002255!2.19e-12!6 | |ontology_enrichment_celltype=CL:0002149!2.19e-12!6;CL:0002255!2.19e-12!6 | ||
|ontology_enrichment_celltype_v019=CL:0002149;7.67e-18;6!CL:0002255;7.67e-18;6 | |ontology_enrichment_celltype_v019=CL:0002149;7.67e-18;6!CL:0002255;7.67e-18;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,7.67e-18,6;CL:0002255,7.67e-18,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.73e-11;10 | |ontology_enrichment_development_v019=UBERON:0005795;2.73e-11;10 | ||
|ontology_enrichment_disease=DOID:3001!2.19e-12!6;DOID:120!6.25e-11!27;DOID:193!2.96e-10!29 | |ontology_enrichment_disease=DOID:3001!2.19e-12!6;DOID:120!6.25e-11!27;DOID:193!2.96e-10!29 | ||
|ontology_enrichment_disease_v019=DOID:3001;7.67e-18;6!DOID:120;6.71e-16;27!DOID:193;6.74e-15;29!DOID:2394;2.00e-08;14 | |ontology_enrichment_disease_v019=DOID:3001;7.67e-18;6!DOID:120;6.71e-16;27!DOID:193;6.74e-15;29!DOID:2394;2.00e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,7.67e-18,6;DOID:120,6.71e-16,27;DOID:193,6.74e-15,29;DOID:2394,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002118!1.60e-14!5;UBERON:0004532!1.60e-14!5;UBERON:0003134!2.82e-08!37;UBERON:0000474!2.82e-08!37;UBERON:0003100!1.42e-07!41 | |ontology_enrichment_uberon=UBERON:0002118!1.60e-14!5;UBERON:0004532!1.60e-14!5;UBERON:0003134!2.82e-08!37;UBERON:0000474!2.82e-08!37;UBERON:0003100!1.42e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;5.15e-21;5!UBERON:0003134;1.90e-14;33!UBERON:0000474;3.95e-11;37!UBERON:0003100;1.59e-09;41!UBERON:0000992;5.70e-09;13!UBERON:0003133;3.56e-08;44!UBERON:0005156;8.24e-08;59!UBERON:0000990;8.24e-08;59!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0002118;5.15e-21;5!UBERON:0003134;1.90e-14;33!UBERON:0000474;3.95e-11;37!UBERON:0003100;1.59e-09;41!UBERON:0000992;5.70e-09;13!UBERON:0003133;3.56e-08;44!UBERON:0005156;8.24e-08;59!UBERON:0000990;8.24e-08;59!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,5.15e-21,5;UBERON:0003134,5.76e-12,37;UBERON:0000474,5.76e-12,37;UBERON:0003100,6.32e-11,41;UBERON:0003133,1.62e-09,48;UBERON:0000992,5.70e-09,13;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
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|short_description=p@chr1:180240503..180240504,- | |short_description=p@chr1:180240503..180240504,- | ||
}} | }} |
Latest revision as of 00:56, 28 July 2015
Short description: | p@chr1:180240503..180240504, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:180240503..180240504, - |
Coexpression cluster: | C412_serous_breast_papillotubular_ductus_seminal_kidney_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 7.67e-18 | 6 |
stromal cell of endometrium | 7.67e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
right ovary | 5.15e-21 | 5 |
female reproductive organ | 5.76e-12 | 37 |
female reproductive system | 5.76e-12 | 37 |
female organism | 6.32e-11 | 41 |
reproductive organ | 1.62e-09 | 48 |
female gonad | 5.70e-09 | 13 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.67e-18 | 6 |
female reproductive organ cancer | 6.71e-16 | 27 |
reproductive organ cancer | 6.74e-15 | 29 |
ovarian cancer | 2.00e-08 | 14 |