FFCP PHASE1:Hg19::chr8:4852652..4852655,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64478 | |EntrezGene=64478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |HGNC=14026 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIG2 | |UniProt=E5RIG2 | ||
|association_with_transcript=-158bp_to_ENST00000520002_5end | |association_with_transcript=-158bp_to_ENST00000520002_5end | ||
|cluster_id=chr8:4852652..4852655,- | |||
|description=CAGE_peak_29_at_CSMD1_5end | |description=CAGE_peak_29_at_CSMD1_5end | ||
|id=chr8:4852652..4852655,- | |id=chr8:4852652..4852655,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;5.97e-34;1 | |ontology_enrichment_celltype_v019=CL:0000222;5.97e-34;1 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.96e-12;3 | |ontology_enrichment_development_v019=UBERON:0006215;1.96e-12;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p29@CSMD1 | |short_description=p29@CSMD1 | ||
}} | }} |
Latest revision as of 09:40, 18 September 2015
Short description: | p29@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_CSMD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -158bp_to_ENST00000520002_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | E5RIG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.07e-17 | 2 |
brain | 4.31e-08 | 68 |
future brain | 4.31e-08 | 68 |
occipital lobe | 7.49e-08 | 5 |
neocortex | 3.14e-07 | 20 |
central nervous system | 6.74e-07 | 81 |
cerebellum | 7.58e-07 | 6 |
rhombic lip | 7.58e-07 | 6 |
gyrus | 8.97e-07 | 6 |